Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31015
         (417 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    31   0.013
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    28   0.12 
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    27   0.36 
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    26   0.48 
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    25   0.83 
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    24   1.9  
AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A...    23   3.4  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   4.5  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   4.5  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   5.9  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   5.9  

>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 31.5 bits (68), Expect = 0.013
 Identities = 22/59 (37%), Positives = 33/59 (55%)
 Frame = +1

Query: 4   YEQALRVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRI 180
           YE  L VKRS++ +  +S  R NE+TV+   +S     I + L I+  +Y    K+LRI
Sbjct: 348 YEVILVVKRSMDIKESDSWWRRNEITVVMSLISFFFPMIFEALGII--EYYHPRKQLRI 404


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 28.3 bits (60), Expect = 0.12
 Identities = 21/114 (18%), Positives = 50/114 (43%), Gaps = 3/114 (2%)
 Frame = +1

Query: 1   NYEQALRVKR---SVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKE 171
           N ++A R+K    S +Q+    + R  E   +         K+ +E+A    +  E+  E
Sbjct: 241 NEKEAKRLKEDQISKQQELNIIEKRKEEADEVLKEKKKEVGKMTREMAKKEQEIREVEAE 300

Query: 172 LRIADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVE 333
           +      + + + ++ HT + L    + + +     ++ + ++K +   L+EVE
Sbjct: 301 MSKRHPMFIKAKEKVAHTQKKLDGALKTLEQARRADEAHQADIKKLVDELQEVE 354


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 26.6 bits (56), Expect = 0.36
 Identities = 17/65 (26%), Positives = 32/65 (49%)
 Frame = +1

Query: 184 DERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEANAIVGGKRI 363
           DE Y  ++ E     + + EE ++  ++ + K+S E  +KN   +  +V+AN     +R 
Sbjct: 340 DETYDALKAERVEKEKLVKEEIKQYDELVSAKESKESTLKNSLDKFAKVQANMRATNERR 399

Query: 364 ISKLE 378
              LE
Sbjct: 400 KKTLE 404


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 26.2 bits (55), Expect = 0.48
 Identities = 23/109 (21%), Positives = 42/109 (38%)
 Frame = +1

Query: 7   EQALRVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAADYDEITKELRIAD 186
           ++ L   +  + + +  + +  ELT   VN+   K K E+    +     +  +    A 
Sbjct: 660 QEQLSKYQQTKMKVKRQEQKCKELTARLVNVDEEKVKFERSCRTIIEQLLDQQRRKVAAL 719

Query: 187 ERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVE 333
           ERY     E     + +   +ER    EA  + LE   ++    L  VE
Sbjct: 720 ERYAAASREHDLLEQRIRLFEERNNDREANFRLLEDAYQSAKKTLANVE 768


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 25.4 bits (53), Expect = 0.83
 Identities = 23/105 (21%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
 Frame = +1

Query: 85  INVNLSSSKAKIEQELAIVAADYDEITKELRIADERYQRVQTELKHTVEHLHEEQERIVK 264
           + V++   K   +Q    +  + +E+       DER Q +  +L    +H+ + Q+ ++ 
Sbjct: 703 LQVSMDELKRHTQQRREQLQRELNELNSAYAKEDERLQEMTRKLHQRQQHMKKLQQELLT 762

Query: 265 IEAVKKSL-----EIEVKNISVRLEEVEANAIVGGKRIISKLEGG 384
            E   + L     E E +  ++R EE+E +     + I++KL+ G
Sbjct: 763 NEQQLQQLAGVVFEGETEETTLR-EELEHS-----RTILAKLQKG 801


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +1

Query: 100 SSSKAKIEQELAIVAADYDEITKELRIADERYQRVQTELKHTVEHLH-EEQER 255
           + SK + EQEL  +     E  KEL     RY+ ++ + +     L+ +EQ+R
Sbjct: 320 NKSKERAEQELERLKITIAEKEKELEQVRPRYEAMRRKEEECSRELNLKEQKR 372


>AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A2
           protein.
          Length = 496

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 166 KELRIADERYQRVQTELKHTVEHLHEEQE 252
           KEL  A+ER +R Q +L+   E   E+ +
Sbjct: 466 KELESAEERREREQQDLELAKEMAEEDDD 494


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 330 RSQRYCWWQAYHQQARGGGPVP 395
           + Q+    Q  HQ   GGGP+P
Sbjct: 474 QQQQQSQHQQQHQHQPGGGPLP 495


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 330 RSQRYCWWQAYHQQARGGGPVP 395
           + Q+    Q  HQ   GGGP+P
Sbjct: 474 QQQQQSQHQQQHQHQPGGGPLP 495


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 protein.
          Length = 961

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 12/85 (14%)
 Frame = +1

Query: 73   ELTVINVNLSSSKAKIEQELAIVA---------ADYDEITKELRIADERYQ---RVQTEL 216
            E T    +L+ S+ K EQ++   A          DY+  + +L   + R Q   + Q + 
Sbjct: 851  EATEARSHLADSQVKKEQQITSQALPPHSMHTDCDYEPESHKLLAENYRQQHQQQQQQQQ 910

Query: 217  KHTVEHLHEEQERIVKIEAVKKSLE 291
            +   +H HE+Q++   + A ++ LE
Sbjct: 911  QQQQQHEHEQQQQQNSMLATQQRLE 935


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 190 RYQRVQTELKHTVEHLH 240
           +Y R+ +   HT +HLH
Sbjct: 872 QYNRIASIANHTFDHLH 888


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.311    0.128    0.323 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 347,138
Number of Sequences: 2352
Number of extensions: 5032
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34205040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)