Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31009
         (577 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0488 - 22647196-22647561,22647847-22647999,22648716-226496...    30   1.5  
05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082...    28   6.1  

>01_05_0488 -
           22647196-22647561,22647847-22647999,22648716-22649663,
           22649783-22649830
          Length = 504

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
 Frame = +3

Query: 48  RPCGYRH----RCPPLQRTTLRSFGLNSTPAPMEL 140
           R CGYR     R P L R TL S+   +T AP+ L
Sbjct: 252 RGCGYRRVELRRAPKLVRLTLESWSSTTTTAPLRL 286


>05_03_0496 +
           14706959-14707020,14707173-14707538,14708070-14708209,
           14708319-14708566,14708814-14708946,14709096-14709159,
           14709284-14709380,14709505-14709607,14709702-14709838,
           14710063-14710152,14710240-14710401
          Length = 533

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -1

Query: 577 FFFFFFISNELYC 539
           FFFFFF S ++YC
Sbjct: 102 FFFFFFFSGDVYC 114


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,919,832
Number of Sequences: 37544
Number of extensions: 258806
Number of successful extensions: 737
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1340735508
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)