Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31004
         (729 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003457-1|AAO39460.1|  985|Drosophila melanogaster RH34107p pro...    33   0.30 
AE014297-1126|AAF54512.1|  985|Drosophila melanogaster CG3999-PA...    33   0.30 

>BT003457-1|AAO39460.1|  985|Drosophila melanogaster RH34107p
           protein.
          Length = 985

 Score = 33.5 bits (73), Expect = 0.30
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -1

Query: 726 CTELRIFRYSLSMFTFYNLPLSLKCFSNRFHYFFLSLNPSLFG 598
           CT   +     +M+  Y+ P  LK  +NR H+F L+L   + G
Sbjct: 356 CTAQALLANMSAMYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398


>AE014297-1126|AAF54512.1|  985|Drosophila melanogaster CG3999-PA
           protein.
          Length = 985

 Score = 33.5 bits (73), Expect = 0.30
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -1

Query: 726 CTELRIFRYSLSMFTFYNLPLSLKCFSNRFHYFFLSLNPSLFG 598
           CT   +     +M+  Y+ P  LK  +NR H+F L+L   + G
Sbjct: 356 CTAQALLANMSAMYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.310    0.123    0.331 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,038,222
Number of Sequences: 53049
Number of extensions: 173428
Number of successful extensions: 274
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 274
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)