Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31002
         (339 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P36188 Cluster: Troponin I; n=50; cellular organisms|Re...    44   5e-04
UniRef50_Q695T8 Cluster: Rhomboid-like protease 4; n=1; Toxoplas...    31   5.1  
UniRef50_UPI0000DB7006 Cluster: PREDICTED: similar to kinesin fa...    30   8.8  
UniRef50_UPI00006A0B20 Cluster: Trichohyalin.; n=1; Xenopus trop...    30   8.8  
UniRef50_A4BQU6 Cluster: Type 4 fimbrial biogenesis protein PilO...    30   8.8  
UniRef50_Q49BK0 Cluster: Rhino; n=4; melanogaster subgroup|Rep: ...    30   8.8  

>UniRef50_P36188 Cluster: Troponin I; n=50; cellular organisms|Rep:
           Troponin I - Drosophila melanogaster (Fruit fly)
          Length = 269

 Score = 44.4 bits (100), Expect = 5e-04
 Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
 Frame = +1

Query: 58  PK-PTQQQWRMMKRSKAKQAEIDRKRAEVRKRMAGGLQSQKG*EGFHDTXXXXXXXXXXX 234
           PK P   + +  +  KAKQAEI+RKRAEVRKRM    +++K  +GF              
Sbjct: 54  PKDPNDPKVKAEEAKKAKQAEIERKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLR 113

Query: 235 XXSRRIVEEGS*NVKLLKGGASSRTRCGKPNNIDD 339
             +   +++     K  +       RCG P N+ D
Sbjct: 114 KKAAEELKKEQ-ERKAAERRRIIEERCGSPRNLSD 147



 Score = 35.1 bits (77), Expect = 0.31
 Identities = 15/16 (93%), Positives = 16/16 (100%)
 Frame = +2

Query: 155 QEASKAKKAKKGFMTP 202
           +EASKAKKAKKGFMTP
Sbjct: 87  EEASKAKKAKKGFMTP 102


>UniRef50_Q695T8 Cluster: Rhomboid-like protease 4; n=1; Toxoplasma
           gondii|Rep: Rhomboid-like protease 4 - Toxoplasma gondii
          Length = 641

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 16/41 (39%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
 Frame = +1

Query: 58  PKPTQQQWRMMKRSKAKQAEIDRKRA--EVRKRMAGGLQSQ 174
           PK TQQ  ++++R+KA++AE  R+R    ++K+ AGG + +
Sbjct: 501 PKATQQ--KLLERAKARKAEAIRRRKLQAIQKKKAGGARGK 539


>UniRef50_UPI0000DB7006 Cluster: PREDICTED: similar to kinesin
           family member 21A isoform 1; n=4; Coelomata|Rep:
           PREDICTED: similar to kinesin family member 21A isoform
           1 - Apis mellifera
          Length = 1442

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +1

Query: 55  HPKPTQQQWRMMKRSKAKQAEIDRKRAEVRKRMAGGLQSQK 177
           +PK  +Q+W+  +R+ AKQA   +  AE  + M   LQ ++
Sbjct: 775 NPKALKQRWQTFERTIAKQALAKQAAAETEREMERLLQERE 815


>UniRef50_UPI00006A0B20 Cluster: Trichohyalin.; n=1; Xenopus
           tropicalis|Rep: Trichohyalin. - Xenopus tropicalis
          Length = 1172

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +1

Query: 43  LAVRHPKPTQQQWRMMKRSKAKQAEIDRKRAEVRKR 150
           +A+   +  ++ W   KR +A++ E DRKR E RKR
Sbjct: 837 IAIEEGRKREEAW---KREEARKREEDRKREEARKR 869


>UniRef50_A4BQU6 Cluster: Type 4 fimbrial biogenesis protein PilO;
           n=2; Chromatiales|Rep: Type 4 fimbrial biogenesis
           protein PilO - Nitrococcus mobilis Nb-231
          Length = 205

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 14/44 (31%), Positives = 29/44 (65%)
 Frame = +1

Query: 37  LILAVRHPKPTQQQWRMMKRSKAKQAEIDRKRAEVRKRMAGGLQ 168
           L+LAV      Q QW  +++++A++ E+ +K+ E ++R+A  L+
Sbjct: 32  LVLAVGWYFDWQHQWEQLEQARARETEL-KKQFERKQRIAANLE 74


>UniRef50_Q49BK0 Cluster: Rhino; n=4; melanogaster subgroup|Rep:
           Rhino - Drosophila teissieri (Fruit fly)
          Length = 544

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 15/41 (36%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
 Frame = +1

Query: 52  RHPKPTQQQWRMMK-RSKAKQAEIDRKRAEVRKRMAGGLQS 171
           R  K TQQ+ + ++ ++KAK ++++RK  E  K+MAG +++
Sbjct: 107 RSSKKTQQRSKPLQPKTKAKTSQMNRKEKENIKKMAGTIKN 147


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 284,225,554
Number of Sequences: 1657284
Number of extensions: 3941262
Number of successful extensions: 11203
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11192
length of database: 575,637,011
effective HSP length: 88
effective length of database: 429,796,019
effective search space used: 10315104456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)