Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31002
         (339 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   1.1  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   1.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   8.0  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    20   8.0  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 237 LRSSNMSFFFLSGVMKPFL 181
           L  +N  FFFL+GVM   L
Sbjct: 83  LLEANRLFFFLTGVMASLL 101


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 237 LRSSNMSFFFLSGVMKPFL 181
           L  +N  FFFL+GVM   L
Sbjct: 83  LLEANRLFFFLTGVMASLL 101


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +3

Query: 15   NHLVGPSSNSCSKTP*TNTTTMADDEAK*GQ 107
            NH    ++ S +  P T  + + DD+   GQ
Sbjct: 1181 NHWQTKTTTSTTTRPTTTVSQLIDDKCDSGQ 1211


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -1

Query: 219 SFFFLSGVMKPFLAF 175
           + F L  ++KP +AF
Sbjct: 119 NLFLLDNIVKPIIAF 133


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,198
Number of Sequences: 336
Number of extensions: 1023
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6558670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)