Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31002
         (339 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1178 - 24580294-24580727,24581749-24582274                       28   2.1  
02_01_0497 + 3607227-3607462,3607600-3607661,3608138-3608286,360...    27   5.0  
01_06_0481 - 29646245-29646371,29646474-29646556,29646672-296467...    27   5.0  

>07_03_1178 - 24580294-24580727,24581749-24582274
          Length = 319

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 70  QQQWRMMKRSKAKQAEIDRKRAEVRKRMAGGLQSQKG*EGFHD 198
           +++WR  +    K+ E  RKR E R  M  G  +  G  G  D
Sbjct: 104 EERWRRREMQSLKRLEAKRKRLERRNSMNSGRSAGAGGGGRDD 146


>02_01_0497 +
           3607227-3607462,3607600-3607661,3608138-3608286,
           3608418-3608538,3608638-3608793,3609041-3609086,
           3609414-3609480,3609553-3609629,3610180-3610249,
           3610956-3611014,3611105-3611213,3611552-3611611,
           3611701-3611763,3612007-3612131,3612260-3612422,
           3612506-3612565,3612802-3612860,3613057-3613138,
           3613227-3613290,3613506-3613573,3613648-3613758
          Length = 668

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 110 CLALLRFIIRHCCCVGLGCLTARIRRWPYEM 18
           CLA+   I   CC  GL  L  +I +WP ++
Sbjct: 135 CLAMTEAIKELCCAKGLSELDVKI-KWPNDL 164


>01_06_0481 -
           29646245-29646371,29646474-29646556,29646672-29646752,
           29646843-29646899,29647007-29647094,29647304-29647374,
           29647457-29647585,29647662-29648051,29648332-29648517,
           29648612-29648692,29648787-29648879,29648966-29649086,
           29649200-29649409,29649560-29649727,29649898-29650065,
           29650144-29650311,29650453-29650620,29650738-29650905,
           29651023-29651190,29651567-29651734,29652391-29652558,
           29652645-29652812,29655720-29655887,29656069-29656236,
           29656391-29656558,29656670-29656837,29657525-29657664,
           29658033-29658221,29658243-29658315,29658379-29658452,
           29658535-29658654,29658718-29658738,29658794-29658999,
           29659094-29659271,29660066-29660126,29660232-29660341,
           29660427-29660558,29661091-29661258,29661339-29661465,
           29661794-29661831,29663321-29663422,29663505-29663562,
           29663659-29663760,29663844-29663990,29664098-29664234,
           29664313-29664462,29664561-29664720,29665820-29665878,
           29666025-29666181,29666288-29666433,29666523-29666666,
           29667242-29667376
          Length = 2344

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 106 KQAEIDRKRAEVRKRMAGGLQSQ 174
           + AE+D +R EVR   A G+Q Q
Sbjct: 723 QMAELDARRTEVRNNAARGVQGQ 745


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,302,165
Number of Sequences: 37544
Number of extensions: 125509
Number of successful extensions: 362
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 362
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 470052804
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)