Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31002
         (339 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    23   2.4  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   3.1  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    22   7.3  
AY062201-1|AAL58562.1|  151|Anopheles gambiae cytochrome P450 CY...    22   7.3  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    22   7.3  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    21   9.6  

>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +1

Query: 67  TQQQWRMMKRSKAKQAEIDRKRAEVRKR 150
           TQ +W M ++ + ++ +  R+  E R+R
Sbjct: 60  TQLRWLMEEKLREQREDAQRREEEARRR 87


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = +1

Query: 100 KAKQAEIDRKRAE 138
           +AKQ E++RKRAE
Sbjct: 35  EAKQRELERKRAE 47


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 82  RMMKRSKAKQAEIDRKRAEVRKRMAGGLQS 171
           RMMK++  K+  +  +         GGLQS
Sbjct: 768 RMMKKALQKENSLTTELESTAAAAGGGLQS 797


>AY062201-1|AAL58562.1|  151|Anopheles gambiae cytochrome P450
          CYP4D22 protein.
          Length = 151

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 13 TTIS*GHLLILAVRHPKPTQQQWR 84
          TTI+    L+L  RHP+  ++ +R
Sbjct: 13 TTIAISFTLLLLARHPEVQERVYR 36


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -2

Query: 83  RHCCCVGLGC 54
           +HCCC G  C
Sbjct: 286 QHCCCRGSHC 295


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
            transcriptase protein.
          Length = 1049

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -2

Query: 335  SMLLGLPHLVLDDAPPFSSFTFYDPSSTIR 246
            S + GL +  +D +P       Y PS T+R
Sbjct: 966  SFIAGLLNGSIDSSPLLHRVDIYAPSRTLR 995


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 303,664
Number of Sequences: 2352
Number of extensions: 4722
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 24206952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)