Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31002
(339 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i pr... 31 0.28
AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4 ... 31 0.28
U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor... 30 0.49
U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor... 30 0.49
AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anch... 30 0.49
U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated p... 28 1.5
AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2 ... 28 1.5
AY943817-1|AAY18583.1| 703|Caenorhabditis elegans signal transd... 27 4.5
AL132952-23|CAN99759.1| 703|Caenorhabditis elegans Hypothetical... 27 4.5
AL132952-22|CAN86928.1| 567|Caenorhabditis elegans Hypothetical... 27 4.5
AL132952-21|CAB61149.2| 706|Caenorhabditis elegans Hypothetical... 27 4.5
U28928-10|AAN63432.2| 388|Caenorhabditis elegans Hypothetical p... 26 6.0
>AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i
protein 4 protein.
Length = 194
Score = 30.7 bits (66), Expect = 0.28
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 155 QEASKAKKAKKGFMTP 202
+EAS+ KKAKKGF+TP
Sbjct: 27 EEASRMKKAKKGFLTP 42
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 106 KQAEIDRKRAEVRKRMAGGLQSQKG*EGF 192
K AE +RK+ EVRKR+ + +K +GF
Sbjct: 11 KMAERERKKEEVRKRLEEASRMKKAKKGF 39
>AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4
protein.
Length = 194
Score = 30.7 bits (66), Expect = 0.28
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 155 QEASKAKKAKKGFMTP 202
+EAS+ KKAKKGF+TP
Sbjct: 27 EEASRMKKAKKGFLTP 42
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 106 KQAEIDRKRAEVRKRMAGGLQSQKG*EGF 192
K AE +RK+ EVRKR+ + +K +GF
Sbjct: 11 KMAERERKKEEVRKRLEEASRMKKAKKGF 39
>U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor
protein protein1, isoform b protein.
Length = 1284
Score = 29.9 bits (64), Expect = 0.49
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 110 CLALLRFIIRHCCCVGLGCLTARIRRWPYE 21
C+A+L I+H C G+G ++ R+ PYE
Sbjct: 1199 CVAMLEPHIQHLICAGIGSVSIRLFVSPYE 1228
>U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein1, isoform a protein.
Length = 1280
Score = 29.9 bits (64), Expect = 0.49
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 110 CLALLRFIIRHCCCVGLGCLTARIRRWPYE 21
C+A+L I+H C G+G ++ R+ PYE
Sbjct: 1195 CVAMLEPHIQHLICAGIGSVSIRLFVSPYE 1224
>AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein.
Length = 1280
Score = 29.9 bits (64), Expect = 0.49
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 110 CLALLRFIIRHCCCVGLGCLTARIRRWPYE 21
C+A+L I+H C G+G ++ R+ PYE
Sbjct: 1195 CVAMLEPHIQHLICAGIGSVSIRLFVSPYE 1224
>U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated
protein 27 protein.
Length = 242
Score = 28.3 bits (60), Expect = 1.5
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2
Query: 155 QEASKAKKAKKGFMTP 202
+EA KKAKKGF+TP
Sbjct: 28 EEAGNKKKAKKGFLTP 43
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 97 SKAKQAEIDRKRAEVRKRMAGGLQSQKG*EGF 192
++ K AE + K+AEVRKR+ +K +GF
Sbjct: 9 AQRKAAEREAKKAEVRKRLEEAGNKKKAKKGF 40
>AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2
protein.
Length = 242
Score = 28.3 bits (60), Expect = 1.5
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2
Query: 155 QEASKAKKAKKGFMTP 202
+EA KKAKKGF+TP
Sbjct: 28 EEAGNKKKAKKGFLTP 43
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 97 SKAKQAEIDRKRAEVRKRMAGGLQSQKG*EGF 192
++ K AE + K+AEVRKR+ +K +GF
Sbjct: 9 AQRKAAEREAKKAEVRKRLEEAGNKKKAKKGF 40
>AY943817-1|AAY18583.1| 703|Caenorhabditis elegans signal
transducer and activatorof transcription STA-1 protein.
Length = 703
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 113 PKSTASALRCASAWQEASKAKKAKKGFMTP 202
P AS L+CA++ Q A+ K A F+TP
Sbjct: 303 PPKGASDLKCAASMQAATDQKYALLFFITP 332
>AL132952-23|CAN99759.1| 703|Caenorhabditis elegans Hypothetical
protein Y51H4A.17c protein.
Length = 703
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 113 PKSTASALRCASAWQEASKAKKAKKGFMTP 202
P AS L+CA++ Q A+ K A F+TP
Sbjct: 303 PPKGASDLKCAASMQAATDQKYALLFFITP 332
>AL132952-22|CAN86928.1| 567|Caenorhabditis elegans Hypothetical
protein Y51H4A.17b protein.
Length = 567
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 113 PKSTASALRCASAWQEASKAKKAKKGFMTP 202
P AS L+CA++ Q A+ K A F+TP
Sbjct: 303 PPKGASDLKCAASMQAATDQKYALLFFITP 332
>AL132952-21|CAB61149.2| 706|Caenorhabditis elegans Hypothetical
protein Y51H4A.17a protein.
Length = 706
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 113 PKSTASALRCASAWQEASKAKKAKKGFMTP 202
P AS L+CA++ Q A+ K A F+TP
Sbjct: 303 PPKGASDLKCAASMQAATDQKYALLFFITP 332
>U28928-10|AAN63432.2| 388|Caenorhabditis elegans Hypothetical
protein C44B7.12 protein.
Length = 388
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +1
Query: 52 RHPKPTQQ-QWRMMKRSKAKQAEIDRKRAE 138
+H K Q+ Q K+S+AKQ E D+K E
Sbjct: 6 KHKKKQQRRQQEAQKKSRAKQIETDKKNDE 35
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,426,282
Number of Sequences: 27780
Number of extensions: 90924
Number of successful extensions: 280
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 279
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 429601520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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