Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30999
         (796 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   2.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.7  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   4.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.9  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   6.5  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   6.5  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 393 FLFFVQNIPFLLAITNTCLIQT 328
           ++FFV+N P L  I + C I T
Sbjct: 145 YVFFVENEPILYLIFSYCPIVT 166


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 181 CDVDRLR*PLNTKWTLN 231
           C V +   PLN  WTLN
Sbjct: 625 CTVSKGDYPLNISWTLN 641


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +3

Query: 393 TNIFTYSKQSVVSVVFIKNKQTSDTFLFSNP 485
           TN+FT+ +   ++V   +N++ +   +  NP
Sbjct: 165 TNVFTFPETQFIAVTAYQNEKITKLKINYNP 195


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = -3

Query: 500 FLIFIWITKKKCITCLFIFYKDHTDDTLFTVC 405
           F  FI  T      C FIF+  H    LF +C
Sbjct: 170 FCAFIIFTMHLLFCCAFIFFNMH---LLFLLC 198


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +3

Query: 378 VQKKGTNIFTYSKQSVVSVVFIKNKQTSDTFLFSNPNKNQK 500
           V+K+  +    +++S  S     ++QTSD+FL S  N  +K
Sbjct: 373 VKKRRKDKREITRKSTSSSTHTSSQQTSDSFL-SKRNSEKK 412


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 198 EPIDVTMSSLSKMETLNL 145
           +PID+    LS +ET NL
Sbjct: 491 KPIDLNSGDLSMLETNNL 508


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,962
Number of Sequences: 336
Number of extensions: 4543
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21583952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)