Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30999
         (796 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0810 + 7429834-7429960,7430534-7430696,7430796-7430844,743...    50   2e-06
08_02_0501 + 17836948-17837373,17837857-17839184,17839270-178393...    30   1.8  
08_02_0910 - 22522465-22522473,22522565-22522651,22522707-225227...    28   7.4  
05_02_0115 - 6758540-6758771,6759417-6759524,6759670-6759840,675...    28   7.4  
04_01_0206 + 2507827-2508705,2508844-2509902                           28   7.4  

>12_01_0810 +
           7429834-7429960,7430534-7430696,7430796-7430844,
           7431203-7431385,7431824-7431898,7431963-7432148,
           7432362-7432450,7432892-7433444
          Length = 474

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 20/40 (50%), Positives = 27/40 (67%)
 Frame = +1

Query: 661 GRTDLIEYAKKENIPVSATPKEPWSTDENIMHISYESGVL 780
           GR D IEYAKK N+P+  T K  +S D N+ H+S+E  +L
Sbjct: 226 GREDAIEYAKKHNVPIPVTKKSIYSRDRNLWHLSHEGDIL 265



 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 21/28 (75%), Positives = 24/28 (85%)
 Frame = +3

Query: 288 IAHGATGKGNDQVRFELSMYSLWPEGKV 371
           +AHG TGKGNDQVRFEL+ Y+L PE KV
Sbjct: 188 VAHGCTGKGNDQVRFELTFYALNPELKV 215


>08_02_0501 +
           17836948-17837373,17837857-17839184,17839270-17839380,
           17839719-17839998,17840275-17840396,17840451-17840556,
           17840814-17841020,17841130-17841255,17841719-17841817,
           17842265-17842456,17842555-17843073
          Length = 1171

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = -3

Query: 743 SSVDQGSFGVAETGIFSFLAYSIKSVLPLKPLEEFRDAPRCYNL 612
           SS D+G  GV      S   Y+  S +P    E+FR A  C+ L
Sbjct: 56  SSSDEGGGGVYPGNAISTTKYTAASFVPKSLFEQFRRAANCFFL 99


>08_02_0910 -
           22522465-22522473,22522565-22522651,22522707-22522768,
           22523170-22523697,22524954-22525047
          Length = 259

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +1

Query: 628 GASLNSSKGFRGRTDLIEYAKKENIPV 708
           GA +N   GF  +T + ++ KK+N+P+
Sbjct: 206 GAEMNYISGFYHKTHIYKFVKKKNLPL 232


>05_02_0115 -
           6758540-6758771,6759417-6759524,6759670-6759840,
           6759967-6760077,6760562-6760663,6761139-6761366,
           6761568-6761696,6761753-6761869,6761955-6762301,
           6762377-6762931,6763104-6763182,6763429-6763595,
           6763857-6764075,6764956-6765139,6765175-6765371,
           6765717-6766035,6766379-6766538,6767642-6767794,
           6767911-6768013
          Length = 1226

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 11/42 (26%), Positives = 25/42 (59%)
 Frame = +1

Query: 622 HRGASLNSSKGFRGRTDLIEYAKKENIPVSATPKEPWSTDEN 747
           ++G  + SSKG+RG  ++ +    + + +   P EP++ D++
Sbjct: 789 NKGGEIGSSKGWRGSINIADSLGDDEVDL-VIPHEPYNADKD 829


>04_01_0206 + 2507827-2508705,2508844-2509902
          Length = 645

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
 Frame = +1

Query: 376 LYKKKEQIYLHTVNKVSSVWSL*K---INRQVIHFF--LVIQIKIKNELS*SYSHT 528
           L K  E+I+    NK+S++WS  K    N Q++H+      +I+ + ELS  Y+H+
Sbjct: 156 LSKYGERIHALRCNKLSNIWSSPKEVYRNNQLLHYLQDRDHRIREEEELSLQYAHS 211


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,724,748
Number of Sequences: 37544
Number of extensions: 412527
Number of successful extensions: 825
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)