Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30998
         (756 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    25   0.65 
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    25   0.65 
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    25   0.65 
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    25   0.65 
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    25   0.65 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           24   1.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   1.5  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    23   3.5  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   3.5  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   4.6  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   4.6  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   4.6  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   6.1  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   6.1  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   6.1  

>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 407 CVYCGKLFGNNPFFLEDGLPYCE 475
           C   GK F N  FF   G+PY +
Sbjct: 14  CGKVGKNFNNKAFFCFHGIPYAK 36


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 407 CVYCGKLFGNNPFFLEDGLPYCE 475
           C   GK F N  FF   G+PY +
Sbjct: 14  CGKVGKNFNNKAFFCFHGIPYAK 36


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 407 CVYCGKLFGNNPFFLEDGLPYCE 475
           C   GK F N  FF   G+PY +
Sbjct: 14  CGKVGKNFNNEAFFCFHGIPYAK 36


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 407 CVYCGKLFGNNPFFLEDGLPYCE 475
           C   GK F N  FF   G+PY +
Sbjct: 14  CGKVGKNFNNEAFFCFHGIPYAK 36


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 407 CVYCGKLFGNNPFFLEDGLPYCE 475
           C   GK F N  FF   G+PY +
Sbjct: 13  CGKVGKNFNNEAFFCFHGIPYAK 35


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = -3

Query: 211 GAPYASKSRDEWTSNVSITRCAKWHTRAG 125
           G P  S    +W +N   T   +WH   G
Sbjct: 353 GFPKRSSDEQQWRNNQPSTSNNRWHNNNG 381


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 60  VKLLGYHRHQNEEGEY*ISLPCPA 131
           +K+LGY RH  +     ++L CPA
Sbjct: 237 IKVLGYQRHSKQN----VALLCPA 256


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +1

Query: 175 SIHHGSWTHMVPRALHLRECNMQTSS 252
           +IHHG+     P   + ++C+  T S
Sbjct: 28  NIHHGATPPQSPNQQYTKDCSSPTPS 53


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 680 WTFNGRVFYRKADLP 636
           W  N RV Y+K DLP
Sbjct: 164 WFQNRRVKYKKEDLP 178


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = +3

Query: 141 HFAHLVMETLEVHSSRLLDAYGAPSTSSA*MQH 239
           HF H     LEV S   L A   P+ S    QH
Sbjct: 129 HFLHENKYQLEVDSGYHLGASSTPTNSCMEYQH 161


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = +3

Query: 141 HFAHLVMETLEVHSSRLLDAYGAPSTSSA*MQH 239
           HF H     LEV S   L A   P+ S    QH
Sbjct: 129 HFLHENKYQLEVDSGYHLGASSTPTNSCMEYQH 161


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = +3

Query: 141 HFAHLVMETLEVHSSRLLDAYGAPSTSSA*MQH 239
           HF H     LEV S   L A   P+ S    QH
Sbjct: 129 HFLHENKYQLEVDSGYHLGASSTPTNSCMEYQH 161


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +2

Query: 539 DRWVEALNNNYHSQCFNCTVCKKN 610
           D W  +   NY +  F  + C KN
Sbjct: 9   DYWTNSFYQNYKTNPFLASDCDKN 32


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +2

Query: 539 DRWVEALNNNYHSQCFNCTVCKKN 610
           D W  +   NY +  F  + C KN
Sbjct: 9   DYWTNSFYQNYKTNPFLASDCDKN 32


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +2

Query: 539 DRWVEALNNNYHSQCFNCTVCKKN 610
           D W  +   NY +  F  + C KN
Sbjct: 9   DYWTNSFYQNYKTNPFLASDCDKN 32


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,991
Number of Sequences: 336
Number of extensions: 4356
Number of successful extensions: 21
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)