Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30998
(756 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13716| Best HMM Match : LIM (HMM E-Value=0) 113 2e-25
SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39) 105 3e-23
SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 2e-16
SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22) 83 2e-16
SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42) 81 7e-16
SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32) 79 5e-15
SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34) 73 2e-13
SB_15482| Best HMM Match : LIM (HMM E-Value=0) 72 4e-13
SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 6e-13
SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35) 61 1e-09
SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43) 59 4e-09
SB_20996| Best HMM Match : LIM (HMM E-Value=9e-22) 58 1e-08
SB_31712| Best HMM Match : LIM (HMM E-Value=9e-26) 50 2e-06
SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40) 46 4e-05
SB_40829| Best HMM Match : LIM (HMM E-Value=1.7e-14) 44 2e-04
SB_20327| Best HMM Match : LIM (HMM E-Value=4.9e-16) 44 2e-04
SB_48895| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15) 38 0.009
SB_10859| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14) 34 0.11
SB_59654| Best HMM Match : LIM (HMM E-Value=0.0026) 33 0.33
SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07) 33 0.33
SB_45306| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.58
SB_9023| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_55606| Best HMM Match : TPR_2 (HMM E-Value=8.3e-08) 31 0.76
SB_55441| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_29553| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_37928| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_29293| Best HMM Match : Ant_C (HMM E-Value=2.2) 30 1.8
SB_4027| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_29889| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_10751| Best HMM Match : TNFR_c6 (HMM E-Value=7.6e-17) 29 3.1
SB_40925| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_17378| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20) 29 4.1
SB_22835| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 4.1
SB_17939| Best HMM Match : zf-C2H2 (HMM E-Value=1e-22) 29 4.1
SB_8425| Best HMM Match : EGF (HMM E-Value=0) 29 4.1
SB_51594| Best HMM Match : p450 (HMM E-Value=3.5e-35) 28 7.1
SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08) 28 7.1
SB_15879| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_28163| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 28 9.4
SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 9.4
SB_33873| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 28 9.4
>SB_13716| Best HMM Match : LIM (HMM E-Value=0)
Length = 401
Score = 113 bits (271), Expect = 2e-25
Identities = 50/122 (40%), Positives = 66/122 (54%)
Frame = +2
Query: 143 LCASCNGNIRGPFITALGRIWCPEHFICVNATCRRPLQDIGFVEENGQLYCEFCFEQYIA 322
+CA+CN I G TALG+ W PEHF CV C PL F E +G+ YCE + A
Sbjct: 281 MCAACNKPIIGQVCTALGKTWHPEHFACV--ACEAPLGTQNFFERDGKPYCERDYHDTFA 338
Query: 323 PACDKCHAKIKGDCLNAIGKHFHPECFNCVYCGKLFGNNPFFLEDGLPYCEADWNELFTT 502
P C C+ I C+ A+ + +HPE F C CG FG+ F DG P+C D+ +F
Sbjct: 339 PRCAYCNGPILDSCVTALDQTWHPEHFVCAECGNPFGDTGFHERDGKPFCREDYYAMFAP 398
Query: 503 KC 508
+C
Sbjct: 399 RC 400
Score = 89.8 bits (213), Expect = 2e-18
Identities = 41/110 (37%), Positives = 55/110 (50%)
Frame = +2
Query: 329 CDKCHAKIKGDCLNAIGKHFHPECFNCVYCGKLFGNNPFFLEDGLPYCEADWNELFTTKC 508
C C+ I G A+GK +HPE F CV C G FF DG PYCE D+++ F +C
Sbjct: 282 CAACNKPIIGQVCTALGKTWHPEHFACVACEAPLGTQNFFERDGKPYCERDYHDTFAPRC 341
Query: 509 FACGFPVEAGDRWVEALNNNYHSQCFNCTVCKKNLEGQSFFAKGGRPFCK 658
C P+ D V AL+ +H + F C C F + G+PFC+
Sbjct: 342 AYCNGPIL--DSCVTALDQTWHPEHFVCAECGNPFGDTGFHERDGKPFCR 389
Score = 62.1 bits (144), Expect = 5e-10
Identities = 28/64 (43%), Positives = 35/64 (54%)
Frame = +2
Query: 140 PLCASCNGNIRGPFITALGRIWCPEHFICVNATCRRPLQDIGFVEENGQLYCEFCFEQYI 319
P CA CNG I +TAL + W PEHF+C A C P D GF E +G+ +C +
Sbjct: 339 PRCAYCNGPILDSCVTALDQTWHPEHFVC--AECGNPFGDTGFHERDGKPFCREDYYAMF 396
Query: 320 APAC 331
AP C
Sbjct: 397 APRC 400
>SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39)
Length = 351
Score = 105 bits (253), Expect = 3e-23
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 3/174 (1%)
Frame = +2
Query: 143 LCASCNGNIRGPFITALG---RIWCPEHFICVNATCRRPLQDIGFVEENGQLYCEFCFEQ 313
+CA+CNG+ P +G + + + FIC C++P+ F+ + + C CF+
Sbjct: 175 VCAACNGDF-APGEKKVGYQSKTFHDKCFICDE--CKQPIGSKQFIRRDERRLCNNCFDS 231
Query: 314 YIAPACDKCHAKIKGDCLNAIGKHFHPECFNCVYCGKLFGNNPFFLEDGLPYCEADWNEL 493
A C KC+ IK + G +H ECF C +C K +PF ++G C+ + E
Sbjct: 232 KFAKVCVKCNQVIKTSSVQHAGSTYHSECFTCHHCDKPLAGSPFTKQEGRNVCQNCYRER 291
Query: 494 FTTKCFACGFPVEAGDRWVEALNNNYHSQCFNCTVCKKNLEGQSFFAKGGRPFC 655
+ +C AC +E ++V +H +CF C C K L G+ F + G C
Sbjct: 292 YAKRCGACHNLIEGNTKFVAYDEKYFHRECFTCCKCNKPLAGEKFRIRDGEKIC 345
Score = 63.3 bits (147), Expect = 2e-10
Identities = 37/134 (27%), Positives = 56/134 (41%), Gaps = 2/134 (1%)
Frame = +2
Query: 263 GFVEENGQLYCEFCFEQYIAPACDKCHAKIK-GDC-LNAIGKHFHPECFNCVYCGKLFGN 436
GF ++ +L C C + C C+ G+ + K FH +CF C C + G+
Sbjct: 154 GFTLKDEKLICHGCRGINPSKVCAACNGDFAPGEKKVGYQSKTFHDKCFICDECKQPIGS 213
Query: 437 NPFFLEDGLPYCEADWNELFTTKCFACGFPVEAGDRWVEALNNNYHSQCFNCTVCKKNLE 616
F D C ++ F C C ++ V+ + YHS+CF C C K L
Sbjct: 214 KQFIRRDERRLCNNCFDSKFAKVCVKCNQVIKTSS--VQHAGSTYHSECFTCHHCDKPLA 271
Query: 617 GQSFFAKGGRPFCK 658
G F + GR C+
Sbjct: 272 GSPFTKQEGRNVCQ 285
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +2
Query: 386 FHPECFNCVYCGKLFGNNPFFLEDGLPYCEADWNELFTTKCFAC 517
+H +CF C G+L + + +D YC W E +C C
Sbjct: 105 WHVKCFTCEEDGELLVDLIYCSKDDEIYCCRHWGEKLKPRCAGC 148
>SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 83.0 bits (196), Expect = 2e-16
Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 3/156 (1%)
Frame = +2
Query: 197 RIWCPEHFICVNATCRRPLQDIG-FVEENGQLYCEFCFEQYIAPACDKCHAKIKGDC--L 367
R W + FIC CRRPL+ G F Q+ C C+ C C I L
Sbjct: 359 RHWHDKCFIC--DICRRPLKSDGKFTFYRDQILCNNCYVANYQKECFACGQMIDSGASRL 416
Query: 368 NAIGKHFHPECFNCVYCGKLFGNNPFFLEDGLPYCEADWNELFTTKCFACGFPVEAGDRW 547
G +H CF C CG+ G + F +D +C + F+ +C +CG P+ G
Sbjct: 417 EYSGNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKFSKRCASCGEPLLEGG-- 474
Query: 548 VEALNNNYHSQCFNCTVCKKNLEGQSFFAKGGRPFC 655
V +H CF+C C ++L +F + G +C
Sbjct: 475 VLYNGETWHKACFSCYFCHRSLASAAFSVRDGCRYC 510
Score = 83.0 bits (196), Expect = 2e-16
Identities = 37/154 (24%), Positives = 66/154 (42%)
Frame = +2
Query: 194 GRIWCPEHFICVNATCRRPLQDIGFVEENGQLYCEFCFEQYIAPACDKCHAKIKGDCLNA 373
G W F C N C + GFV ++ +C C++ + C C + +
Sbjct: 420 GNFWHENCFRCAN--CGEAIGTSGFVPKDDTFFCPGCYQSKFSKRCASCGEPLLEGGVLY 477
Query: 374 IGKHFHPECFNCVYCGKLFGNNPFFLEDGLPYCEADWNELFTTKCFACGFPVEAGDRWVE 553
G+ +H CF+C +C + + F + DG YC + + + +C C G +
Sbjct: 478 NGETWHKACFSCYFCHRSLASAAFSVRDGCRYCMECYGKFYAKQCEIC-LKAIVGGEYYT 536
Query: 554 ALNNNYHSQCFNCTVCKKNLEGQSFFAKGGRPFC 655
+N+H +CF C+ C ++L + F +G C
Sbjct: 537 LEESNFHKECFMCSRCGRSLASEGFVREGDELLC 570
Score = 81.8 bits (193), Expect = 5e-16
Identities = 52/187 (27%), Positives = 80/187 (42%), Gaps = 5/187 (2%)
Frame = +2
Query: 173 GPFITALGRIWCPEHFICVNATCRRPLQDIGFVEENGQLYCEFCFEQYIAPACDKCHAKI 352
G + A+ + W HF C TC + F+ + C CF+ A C+ CH KI
Sbjct: 289 GEYTVAMNKNWHLGHFQC--QTCDHSITGRQFIVRGDKPVCTDCFKDSYAHECEACHQKI 346
Query: 353 ---KGDCLNAIGKHFHPECFNCVYCGK-LFGNNPF-FLEDGLPYCEADWNELFTTKCFAC 517
D + +H+H +CF C C + L + F F D + C + + +CFAC
Sbjct: 347 GPESRDISSDDDRHWHDKCFICDICRRPLKSDGKFTFYRDQI-LCNNCYVANYQKECFAC 405
Query: 518 GFPVEAGDRWVEALNNNYHSQCFNCTVCKKNLEGQSFFAKGGRPFCKTHAR*KSNKNNLQ 697
G +++G +E N +H CF C C + + F K FC + K +K
Sbjct: 406 GQMIDSGASRLEYSGNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKFSKRCAS 465
Query: 698 LGHCLLD 718
G LL+
Sbjct: 466 CGEPLLE 472
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
Frame = +2
Query: 314 YIAPACDKCHAKIKGDCLNAIGKHFHPECFNCVYCGKLFGNNPFFLEDGLPYCEADWNEL 493
Y A C K G+ A+ K++H F C C F + P C + +
Sbjct: 275 YSAGPCLKALLIFTGEYTVAMNKNWHLGHFQCQTCDHSITGRQFIVRGDKPVCTDCFKDS 334
Query: 494 FTTKCFACGFPVEAGDRWVEALNN-NYHSQCFNCTVCKKNLEGQSFF 631
+ +C AC + R + + ++ ++H +CF C +C++ L+ F
Sbjct: 335 YAHECEACHQKIGPESRDISSDDDRHWHDKCFICDICRRPLKSDGKF 381
>SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22)
Length = 163
Score = 83.0 bits (196), Expect = 2e-16
Identities = 37/154 (24%), Positives = 66/154 (42%)
Frame = +2
Query: 194 GRIWCPEHFICVNATCRRPLQDIGFVEENGQLYCEFCFEQYIAPACDKCHAKIKGDCLNA 373
G W F C N C + GFV ++ +C C++ + C C + +
Sbjct: 8 GNFWHENCFRCAN--CGEAIGTSGFVPKDDTFFCPGCYQSKFSKRCASCGEPLLEGGVLY 65
Query: 374 IGKHFHPECFNCVYCGKLFGNNPFFLEDGLPYCEADWNELFTTKCFACGFPVEAGDRWVE 553
G+ +H CF+C +C + + F + DG YC + + + +C C G +
Sbjct: 66 NGETWHKACFSCYFCHRSLASAAFSVRDGCRYCMECYGKFYAKQCEIC-LKAIVGGEYYT 124
Query: 554 ALNNNYHSQCFNCTVCKKNLEGQSFFAKGGRPFC 655
+N+H +CF C+ C ++L + F +G C
Sbjct: 125 LEESNFHKECFMCSRCGRSLASEGFVREGDELLC 158
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +2
Query: 548 VEALNNNYHSQCFNCTVCKKNLEGQSFFAKGGRPFCKTHAR*KSNKNNLQLGHCLLD 718
+E N +H CF C C + + F K FC + K +K G LL+
Sbjct: 4 LEYSGNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKFSKRCASCGEPLLE 60
>SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42)
Length = 328
Score = 81.4 bits (192), Expect = 7e-16
Identities = 45/116 (38%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Frame = +2
Query: 329 CDKCHAKIKGDCLNAI-GKHFHPECFNCVYCGKLFGNNPF-FLEDGLPYCEADWNELFTT 502
C C AKI L + G+ +H +C C C G + +DG YC+AD+ F T
Sbjct: 102 CVGCEAKIVDRYLVKVSGRAWHTKCLKCCLCSDELGREATCYTKDGKIYCKADYARQFGT 161
Query: 503 KCFACGFPVEAGDRWVE-ALNNNYHSQCFNCTVCKKNLE-GQSFFAKGGRPFCKTH 664
KC CG + A D WV A N YH CF C CK+ L G+ F K G CK H
Sbjct: 162 KCARCGRSIHAND-WVRRAKNCVYHLACFACDNCKRQLSTGEEFALKDGHVLCKLH 216
>SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32)
Length = 648
Score = 78.6 bits (185), Expect = 5e-15
Identities = 51/195 (26%), Positives = 83/195 (42%), Gaps = 8/195 (4%)
Frame = +2
Query: 95 GRGILNK-PALP-GSRVPLCASC-NGNIRGPFITALGR--IWCPEHFICVNATCRRPLQD 259
GRG++ + P + G C C + + G+ W FIC TC+ L D
Sbjct: 62 GRGVVKQVPEMSEGYSCKECGECVTAGSMAVYASRAGQHTCWHASCFICT--TCKELLVD 119
Query: 260 IGFVEENGQLYCEFCFEQYIAPACDKCHAKIKGD-CLNAIGKHFHPECFNCVYCGKLFGN 436
+ + ++ ++YC + + P C C I + C A +H + F C C G
Sbjct: 120 LIYFYKDSKVYCGRHHAETLKPRCAACDEIIFAEQCTEAEDSCWHVQHFCCFECDCPLGG 179
Query: 437 NPFFLEDGLPYCEADWNELFTTKCFACGFPVEAGDRWVEALNNNYH--SQCFNCTVCKKN 610
+ + D PYC + L+ C +CG P+E + ++H ++CF+C C K
Sbjct: 180 MRYVMRDNKPYCCHCFESLYAEFCDSCGEPIEPDASQMAHNGQHWHATNECFSCCTCGKA 239
Query: 611 LEGQSFFAKGGRPFC 655
L G F K G +C
Sbjct: 240 LLGLPFLPKSGEIYC 254
Score = 72.5 bits (170), Expect = 3e-13
Identities = 42/119 (35%), Positives = 54/119 (45%), Gaps = 5/119 (4%)
Frame = +2
Query: 140 PLCASCNGNIRGPFIT-ALGRIWCPEHFICVNATCRRPLQDIGFVEENGQLYCEFCFEQY 316
P CA+C+ I T A W +HF C C PL + +V + + YC CFE
Sbjct: 141 PRCAACDEIIFAEQCTEAEDSCWHVQHFCCFECDC--PLGGMRYVMRDNKPYCCHCFESL 198
Query: 317 IAPACDKCHAKIKGDCLNAI--GKHFHP--ECFNCVYCGKLFGNNPFFLEDGLPYCEAD 481
A CD C I+ D G+H+H ECF+C CGK PF + G YC D
Sbjct: 199 YAEFCDSCGEPIEPDASQMAHNGQHWHATNECFSCCTCGKALLGLPFLPKSGEIYCSPD 257
Score = 37.1 bits (82), Expect = 0.015
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +2
Query: 506 CFACGFPVEAGDRWVEALNNN----YHSQCFNCTVCKKNLEGQSFFAKGGRPFCKTH 664
C CG V AG V A +H+ CF CT CK+ L +F K + +C H
Sbjct: 78 CKECGECVTAGSMAVYASRAGQHTCWHASCFICTTCKELLVDLIYFYKDSKVYCGRH 134
>SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34)
Length = 621
Score = 73.3 bits (172), Expect = 2e-13
Identities = 32/92 (34%), Positives = 51/92 (55%)
Frame = +2
Query: 380 KHFHPECFNCVYCGKLFGNNPFFLEDGLPYCEADWNELFTTKCFACGFPVEAGDRWVEAL 559
K +HP CF C C L + +F +DG+ YC + E F +C AC + + + +A
Sbjct: 332 KCWHPGCFVCTVCNNLLVDLIYFYKDGVIYCGRHYAEQFKPRCAACD-ELIFSETYTQAE 390
Query: 560 NNNYHSQCFNCTVCKKNLEGQSFFAKGGRPFC 655
+ N+H + F C C ++L GQ + A+GG+P C
Sbjct: 391 DRNWHQRHFCCLECDRDLGGQLYVARGGQPHC 422
Score = 52.0 bits (119), Expect = 5e-07
Identities = 25/108 (23%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = +2
Query: 197 RIWCPEHFICVNATCRRPLQDIGFVEENGQLYCEFCFEQYIAPACDKCHAKIKGDCLN-A 373
+ W P F+C C L D+ + ++G +YC + + P C C I + A
Sbjct: 332 KCWHPGCFVCT--VCNNLLVDLIYFYKDGVIYCGRHYAEQFKPRCAACDELIFSETYTQA 389
Query: 374 IGKHFHPECFNCVYCGKLFGNNPFFLEDGLPYCEADWNELFTTKCFAC 517
+++H F C+ C + G + G P+C +++ + C +C
Sbjct: 390 EDRNWHQRHFCCLECDRDLGGQLYVARGGQPHCLECYDKYYAKHCMSC 437
Score = 45.2 bits (102), Expect = 6e-05
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +2
Query: 140 PLCASCNGNIRGPFIT-ALGRIWCPEHFICVNATCRRPLQDIGFVEENGQLYCEFCFEQY 316
P CA+C+ I T A R W HF C+ C R L +V GQ +C C+++Y
Sbjct: 372 PRCAACDELIFSETYTQAEDRNWHQRHFCCLE--CDRDLGGQLYVARGGQPHCLECYDKY 429
Query: 317 IAPACDKCHAKIKGD 361
A C C I D
Sbjct: 430 YAKHCMSCKKNIAAD 444
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Frame = +2
Query: 491 LFTTKCFACGFPVEAGDRWVEALNNN----YHSQCFNCTVCKKNLEGQSFFAKGGRPFCK 658
L T CF C PV G+ V A +H CF CTVC L +F K G +C
Sbjct: 304 LITMNCFRCSKPVMTGEVAVFASRAGEDKCWHPGCFVCTVCNNLLVDLIYFYKDGVIYCG 363
Query: 659 TH 664
H
Sbjct: 364 RH 365
>SB_15482| Best HMM Match : LIM (HMM E-Value=0)
Length = 349
Score = 72.1 bits (169), Expect = 4e-13
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 2/112 (1%)
Frame = +2
Query: 329 CDKCHAKIKGDCL-NAIGKHFHPECFNCVYCGKLFGNNPFFLEDGLPYCEADWNELFTTK 505
C C+ I+ L + + +H C C C + F +D YC D+ ++F TK
Sbjct: 46 CTGCNEPIEDRFLMKVVDEAWHESCLQCCICRSQLSRS-CFSKDRKLYCRTDYEKVFGTK 104
Query: 506 CFACGFPVEAGDRWVEALNNNYHSQCFNCTVCKKNLE-GQSFFAKGGRPFCK 658
C C + A + + AL N YH CF CT+C LE GQ F K + +CK
Sbjct: 105 CSGCKKTIPANELVMRALGNVYHLHCFVCTMCGHILEKGQEFALKDNKLYCK 156
>SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 71.7 bits (168), Expect = 6e-13
Identities = 47/176 (26%), Positives = 72/176 (40%), Gaps = 5/176 (2%)
Frame = +2
Query: 143 LCASCNGNIRGPFITALGRIWCPEHFICVNATCRRPLQDIGFVEENGQLYCEFCFEQYIA 322
+C SC I + + E F+C + CR PL F + + C+ C + A
Sbjct: 1 ICNSCFKTITSSVVRYQNKPHHSECFVCFH--CRTPLAGKTFQMRDDRKVCKDCNRIHYA 58
Query: 323 PACDKCHAKIKGDCLNAIGKH--FHPECFNCVYCGKLFGNNPFFLEDGLPYCEADWNELF 496
C C I+G +H +CF C C K F +G C+ +++ +
Sbjct: 59 KRCVACRQYIEGTVKFVTRDEGTYHSDCFVCSRCRKPLAGKTFTEHEGSWVCDDCYHDRY 118
Query: 497 TTKCFACGFPVEAGDRWVEALNNNYHSQCFNC--TVCKKNLEGQSFFAKG-GRPFC 655
+C C +EA +V+ YH++CF C C+K L G F K GR C
Sbjct: 119 AKRCNMCHQSLEANVEFVKYDEKLYHNECFVCQNPRCRKPLSGAKFALKSDGRRMC 174
Score = 33.9 bits (74), Expect = 0.14
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 560 NNNYHSQCFNCTVCKKNLEGQSFFAKGGRPFCK 658
N +HS+CF C C+ L G++F + R CK
Sbjct: 18 NKPHHSECFVCFHCRTPLAGKTFQMRDDRKVCK 50
>SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 64.1 bits (149), Expect = 1e-10
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
Frame = +2
Query: 284 QLYCEFCFEQYIAPACDKCHAKIKGDCLNAIGKHFHPECFNCVYCGKLFGNNPFFLEDGL 463
Q YC+ ++ CD C ++G+ ++ GK+FH CF C C + F + + G
Sbjct: 4 QYYCKDDYQNQYGKKCDSCQLYLEGEIISIHGKNFHEACFACNSCRQPFPPSDKIIFTGT 63
Query: 464 PY-CEADWN--ELFTTK--------CFACGFPVEAGDRWVEALNNNYHSQCFNCTVCKKN 610
Y C+ N + TTK C CG ++ G + + AL +H CF+CT C
Sbjct: 64 DYLCQTCNNAPKAPTTKVSSPYLHTCAGCGEAIK-GSQALLALEKQWHLWCFSCTKC-HC 121
Query: 611 LEGQSFFAKGGRPFCK 658
L + G+P+C+
Sbjct: 122 LLSLEYMGMDGKPYCE 137
Score = 58.8 bits (136), Expect = 4e-09
Identities = 44/136 (32%), Positives = 57/136 (41%), Gaps = 12/136 (8%)
Frame = +2
Query: 146 CASCNGNIRGPFITALGRIWCPEHFICVNATCRRPLQDIGFVEENGQLY-CEFCFEQYIA 322
C SC + G I+ G+ + F C +CR+P + G Y C+ C A
Sbjct: 19 CDSCQLYLEGEIISIHGKNFHEACFAC--NSCRQPFPPSDKIIFTGTDYLCQTCNNAPKA 76
Query: 323 PA----------CDKCHAKIKGD-CLNAIGKHFHPECFNCVYCGKLFGNNPFFLEDGLPY 469
P C C IKG L A+ K +H CF+C C L + DG PY
Sbjct: 77 PTTKVSSPYLHTCAGCGEAIKGSQALLALEKQWHLWCFSCTKCHCLLSLE-YMGMDGKPY 135
Query: 470 CEADWNELFTTKCFAC 517
CE D+ ELF C AC
Sbjct: 136 CEKDYQELFGVTCAAC 151
>SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 63.3 bits (147), Expect = 2e-10
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Frame = +2
Query: 356 GDCLNAIGKHFHPECFNCVYCGKLFGNNPFFLEDGLPYCEADWNELFTT--------KCF 511
G + A+ ++HP+CF C C + F G Y + ++ CF
Sbjct: 23 GRVIKAMQANWHPDCFRCEICNDCLADTGFVKNAGSTYIPEGEHIMYMGDPVHPWHYNCF 82
Query: 512 ACGFPVEAGDRWVEALNNNYHSQCFNCTVCKKNLEGQSFFAKGGRPFCKTH 664
CG PVE DR V AL +H + F C C+K G ++ + G +C+TH
Sbjct: 83 CCGRPVE--DRVVHALGKAWHVEHFVCAKCEKPFYGHRYYERKGLAYCETH 131
Score = 62.1 bits (144), Expect = 5e-10
Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 8/123 (6%)
Frame = +2
Query: 173 GPFITALGRIWCPEHFICVNATCRRPLQDIGFVEENGQLYC-EFCFEQYIAPA------- 328
G I A+ W P+ F C C L D GFV+ G Y E Y+
Sbjct: 23 GRVIKAMQANWHPDCFRC--EICNDCLADTGFVKNAGSTYIPEGEHIMYMGDPVHPWHYN 80
Query: 329 CDKCHAKIKGDCLNAIGKHFHPECFNCVYCGKLFGNNPFFLEDGLPYCEADWNELFTTKC 508
C C ++ ++A+GK +H E F C C K F + ++ GL YCE +NEL+ C
Sbjct: 81 CFCCGRPVEDRVVHALGKAWHVEHFVCAKCEKPFYGHRYYERKGLAYCETHYNELYGDIC 140
Query: 509 FAC 517
F C
Sbjct: 141 FEC 143
Score = 52.8 bits (121), Expect = 3e-07
Identities = 23/72 (31%), Positives = 33/72 (45%)
Frame = +2
Query: 146 CASCNGNIRGPFITALGRIWCPEHFICVNATCRRPLQDIGFVEENGQLYCEFCFEQYIAP 325
C C + + ALG+ W EHF+C A C +P + E G YCE + +
Sbjct: 81 CFCCGRPVEDRVVHALGKAWHVEHFVC--AKCEKPFYGHRYYERKGLAYCETHYNELYGD 138
Query: 326 ACDKCHAKIKGD 361
C +C+ I GD
Sbjct: 139 ICFECNKAITGD 150
>SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35)
Length = 160
Score = 60.9 bits (141), Expect = 1e-09
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 6/115 (5%)
Frame = +2
Query: 329 CDKCHAKIKGD-CLNAIGKHFHPECFNCVYCGKLFGN--NPFFLEDGLPYCEADWNELFT 499
C C+ I L A+G ++H C C C G+ + + + L C+ D+ LF
Sbjct: 17 CRSCNEPISDKYVLQALGSYWHEGCLKCECCDSRLGDIGSSLYSKANLILCKRDYLRLFG 76
Query: 500 TK--CFACGFPVEAGDRWVEALNNNYHSQCFNCTVCKKNL-EGQSFFAKGGRPFC 655
C C P+ A + + A NN YH +CF C C+K L G++F + C
Sbjct: 77 IPGVCSHCNKPIAAFELVMRARNNAYHIECFGCQRCRKRLVVGEAFCFHDNKVLC 131
>SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43)
Length = 511
Score = 58.8 bits (136), Expect = 4e-09
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Frame = +2
Query: 329 CDKCHAKI-KGDCLNAIGKHFHPECFNCVYCGKLFGNN-PFFLEDGLPYCEADWNELFTT 502
C C ++I + L A+ + +H +C C C N F +DG+ C D+ F+
Sbjct: 248 CAGCGSRILERFYLMAVDQEWHADCLKCSDCELRLDNELTCFSKDGVILCREDYYRRFSV 307
Query: 503 K-CFACGFPVEAGDRWVEALNNNYHSQCFNCTVCKKNL-EGQSFFAKGGRPFCK 658
K C +C + + + + A + YH CF C CK+ L G+ F +G R +CK
Sbjct: 308 KKCSSCSQAISSKELVMRARDQVYHVNCFACDRCKRMLATGEYFGMRGIRIYCK 361
>SB_20996| Best HMM Match : LIM (HMM E-Value=9e-22)
Length = 81
Score = 57.6 bits (133), Expect = 1e-08
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = +2
Query: 266 FVEENGQLYCEFCFEQYIAPACDKCHAKIKGDCLNAIGKHFHPECFNCVYCGKLFGNNPF 445
F + +G+ YCE + C C I G C+ A+ + FHPE F C +C K F
Sbjct: 4 FFDHDGRPYCEMHYHAKRGTLCYSCQKPITGRCITAMHRKFHPEHFVCAFCLKQLNKGTF 63
Query: 446 FLEDGLPYCEADWNELF 496
++ PYC + +LF
Sbjct: 64 KEQNDKPYCHPCFVKLF 80
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/71 (32%), Positives = 37/71 (52%)
Frame = +2
Query: 443 FFLEDGLPYCEADWNELFTTKCFACGFPVEAGDRWVEALNNNYHSQCFNCTVCKKNLEGQ 622
FF DG PYCE ++ T C++C P+ R + A++ +H + F C C K L
Sbjct: 4 FFDHDGRPYCEMHYHAKRGTLCYSCQKPITG--RCITAMHRKFHPEHFVCAFCLKQLNKG 61
Query: 623 SFFAKGGRPFC 655
+F + +P+C
Sbjct: 62 TFKEQNDKPYC 72
Score = 49.2 bits (112), Expect = 4e-06
Identities = 26/58 (44%), Positives = 32/58 (55%)
Frame = +2
Query: 134 RVPLCASCNGNIRGPFITALGRIWCPEHFICVNATCRRPLQDIGFVEENGQLYCEFCF 307
R LC SC I G ITA+ R + PEHF+C A C + L F E+N + YC CF
Sbjct: 21 RGTLCYSCQKPITGRCITAMHRKFHPEHFVC--AFCLKQLNKGTFKEQNDKPYCHPCF 76
>SB_31712| Best HMM Match : LIM (HMM E-Value=9e-26)
Length = 481
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 491 LFTTKCFACGFPVEAGDRWVEALNNNYHSQCFNCTVCKKNLE-GQSFFAKGGRPFCK 658
+F TKC C + A + + AL N YH CF CT+C LE GQ F K + +CK
Sbjct: 2 VFGTKCSGCKKTIPANELVMRALGNVYHLHCFVCTMCGHILEKGQEFALKDNKLYCK 58
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +2
Query: 329 CDKCHAKIKGD--CLNAIGKHFHPECFNCVYCGKLF-GNNPFFLEDGLPYCEADWNEL 493
C C I + + A+G +H CF C CG + F L+D YC+AD+ +L
Sbjct: 7 CSGCKKTIPANELVMRALGNVYHLHCFVCTMCGHILEKGQEFALKDNKLYCKADFAKL 64
>SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40)
Length = 434
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 1/96 (1%)
Frame = +2
Query: 329 CDKCHAKIKGD-CLNAIGKHFHPECFNCVYCGKLFGNNPFFLEDGLPYCEADWNELFTTK 505
C C I L + +H +C C C K F +G +C+ D+ + TK
Sbjct: 5 CAGCQLPIADKFLLKVLDGVWHAQCVQCSDC-KCPLTERCFSREGKLFCKTDFYRRYGTK 63
Query: 506 CFACGFPVEAGDRWVEALNNNYHSQCFNCTVCKKNL 613
C C + D A + +H CF C+ CK+ +
Sbjct: 64 CSGCDQGISPNDMVRRAKHLVFHVDCFVCSYCKRQI 99
>SB_40829| Best HMM Match : LIM (HMM E-Value=1.7e-14)
Length = 82
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/68 (33%), Positives = 31/68 (45%)
Frame = +2
Query: 314 YIAPACDKCHAKIKGDCLNAIGKHFHPECFNCVYCGKLFGNNPFFLEDGLPYCEADWNEL 493
Y A + C IK + AIGK FH CF CV C + + F+ YC+ D+
Sbjct: 10 YCATCGEPC---IKTEYKYAIGKRFHNACFRCVVCEERLSTD-FYARGSELYCKKDYLSK 65
Query: 494 FTTKCFAC 517
F + C C
Sbjct: 66 FNSVCHIC 73
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 506 CFACGFPVEAGDRWVEALNNNYHSQCFNCTVCKKNLEGQSFFAKGGRPFCK 658
C CG P + + A+ +H+ CF C VC++ L F+A+G +CK
Sbjct: 11 CATCGEPCIKTE-YKYAIGKRFHNACFRCVVCEERL-STDFYARGSELYCK 59
>SB_20327| Best HMM Match : LIM (HMM E-Value=4.9e-16)
Length = 339
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +2
Query: 491 LFTTKCFACGFPVEAGDRWVEALNNNYHSQCFNCTVCKKNL-EGQSFFAKGGRPFCK 658
LF TKC C D + A N YH CF C C + L G F + FCK
Sbjct: 79 LFGTKCAKCSLNFSKNDFVMRARNKIYHIDCFRCVACSRQLVPGDEFALREDGLFCK 135
Score = 35.9 bits (79), Expect = 0.036
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +2
Query: 329 CDKCHAKI-KGD-CLNAIGKHFHPECFNCVYCGK-LFGNNPFFL-EDGLPYCEAD 481
C KC K D + A K +H +CF CV C + L + F L EDGL +C+AD
Sbjct: 84 CAKCSLNFSKNDFVMRARNKIYHIDCFRCVACSRQLVPGDEFALREDGL-FCKAD 137
>SB_48895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 829
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +2
Query: 506 CFACGFPVEAGDRWVEALNNNYHSQCFNCTVCKKNL-EGQSFFAKGGRPFCK 658
C C + A + ++ L YH CF CT C L G F GR FC+
Sbjct: 708 CAVCAKLIPATELVMKVLGKVYHLHCFTCTTCHNQLVPGDRFHVVNGRLFCE 759
Score = 31.9 bits (69), Expect = 0.58
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +2
Query: 326 ACDKCHAKIKGD--CLNAIGKHFHPECFNCVYC-GKLFGNNPFFLEDGLPYCEAD 481
AC C I + +GK +H CF C C +L + F + +G +CE D
Sbjct: 707 ACAVCAKLIPATELVMKVLGKVYHLHCFTCTTCHNQLVPGDRFHVVNGRLFCEND 761
>SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15)
Length = 85
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +2
Query: 317 IAPACDKCHAKI-KGDCLNAIGKHFHPECFNCVYCGKLFGNNPFFLEDGLPYCEADWNEL 493
+ C +C + K + AIGK +H C C C K + +DG YC+ + +
Sbjct: 6 VVEKCPRCSKTVYKAEERLAIGKKWHKSCLTCKCCNKSLDSTNLADKDGEIYCKGCYGKN 65
Query: 494 FTTKCFACG 520
F K + G
Sbjct: 66 FGPKGYGYG 74
Score = 35.1 bits (77), Expect = 0.062
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +2
Query: 503 KCFACGFPVEAGDRWVEALNNNYHSQCFNCTVCKKNLEGQSFFAKGGRPFCK 658
KC C V + + A+ +H C C C K+L+ + K G +CK
Sbjct: 9 KCPRCSKTVYKAEERL-AIGKKWHKSCLTCKCCNKSLDSTNLADKDGEIYCK 59
>SB_10859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +2
Query: 245 RPLQDIGFVEENGQ--LYCEFCFEQYIAPAC-DKCHAKIKGDCLNAIGKHFHPECFNCVY 415
R LQ + EN Q + C C+E + P C KC I +CL I + E F C
Sbjct: 7 RTLQSLHSFHENIQDEISCPICYEDFEEPKCLPKCAHNICRECLLGIIEKAQLERFECPI 66
Query: 416 C 418
C
Sbjct: 67 C 67
>SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14)
Length = 446
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 503 KCFACGFPVEAGDRWVEALNNNYHSQCFNCTVCKKNLEGQSFFAKGGR 646
KC CG V + V N+ +H +CF+C C+K L+ + + G+
Sbjct: 43 KCPRCGDNVYHAEE-VSMENHKFHKKCFSCKDCRKKLDSTNAASHDGK 89
Score = 28.7 bits (61), Expect = 5.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 566 NYHSQCFNCTVCKKNLE 616
N+H CFNC C K L+
Sbjct: 237 NWHKSCFNCYKCHKKLD 253
>SB_59654| Best HMM Match : LIM (HMM E-Value=0.0026)
Length = 56
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +2
Query: 323 PACDKCHAKIKGDCLNAIGKHFHPECFNCVYCGK 424
P CDK +G L +G FH CF C C K
Sbjct: 13 PKCDKTVYSAEGQAL--LGMTFHKRCFTCTTCNK 44
Score = 31.9 bits (69), Expect = 0.58
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 503 KCFACGFPVEAGDRWVEALNNNYHSQCFNCTVCKKNLEGQSFFAKG 640
KC C V + + L +H +CF CT C K+L+ + +G
Sbjct: 11 KCPKCDKTVYSAEGQA-LLGMTFHKRCFTCTTCNKSLDSTTVADRG 55
>SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07)
Length = 2128
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 7/56 (12%)
Frame = +2
Query: 329 CDKCHAKIKGDC---LNAIGKHFHPECFNCVYCGKLFG----NNPFFLEDGLPYCE 475
C C I+ ++ + +++H +CF+CV C FG +P + D L +CE
Sbjct: 2031 CASCSQPIRKSMAVYVSELKRYWHDDCFSCVVCHVRFGTAEQRSPLKITDSLLHCE 2086
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +2
Query: 506 CFACGFPVEAGDR-WVEALNNNYHSQCFNCTVC 601
C +C P+ +V L +H CF+C VC
Sbjct: 2031 CASCSQPIRKSMAVYVSELKRYWHDDCFSCVVC 2063
>SB_45306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1576
Score = 31.9 bits (69), Expect = 0.58
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +2
Query: 119 ALPGSRVPLCASCNGNIRGPFITALGRIWCPEHFICVNATCRRPLQDIGFVEEN 280
A GSR+ S GN G F T++G + +C+ C RP DI ++E N
Sbjct: 1259 ACTGSRISSGVSLRGNRPGNF-TSMGNV--DNIKMCIALCCTRPRCDIAYMENN 1309
>SB_9023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 31.5 bits (68), Expect = 0.76
Identities = 24/98 (24%), Positives = 34/98 (34%)
Frame = +2
Query: 314 YIAPACDKCHAKIKGDCLNAIGKHFHPECFNCVYCGKLFGNNPFFLEDGLPYCEADWNEL 493
Y P C K + D + I H + F C CGK F +N D + E
Sbjct: 406 YTCPLCGKVLSN-NWDTVRHIRTHTGYQPFKCTQCGKAFAHN----SDLTKHMRTHSGEK 460
Query: 494 FTTKCFACGFPVEAGDRWVEALNNNYHSQCFNCTVCKK 607
KC CG + + + + + CT C K
Sbjct: 461 -PYKCTQCGKAFVQNSNLTKHMRTHSGEKPYKCTQCGK 497
>SB_55606| Best HMM Match : TPR_2 (HMM E-Value=8.3e-08)
Length = 771
Score = 31.5 bits (68), Expect = 0.76
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +2
Query: 275 ENGQLYCEFCFEQYIAPA-CDKCHAKI--KGDCLN-AIGKHFHPEC 400
EN + +CE C++ +AP C+ C + + C N A ++ H EC
Sbjct: 325 ENAKTHCECCYKSLVAPVPCNHCSSVLYCSAACRNKAWSQYHHVEC 370
>SB_55441| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 694
Score = 31.5 bits (68), Expect = 0.76
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 314 YIAPACDKCHAKIKGDCLNAIGKHFHPECFNCVYCGKLF 430
Y P CDK A +KG+C H + C CG+ F
Sbjct: 601 YKCPYCDKAFA-VKGNCTVHARTHTKERPYKCTNCGRAF 638
>SB_29553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 573
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 476 ADWNELF-TTKCFACGFPVEAGDRWVEALNNNYHSQCFNCTVC 601
AD + F + +C +CG V+ +R V N+ +H CF C +C
Sbjct: 234 ADKKQSFESNRCDSCGKSVDILER-VAVENHVFHKACFVCAIC 275
>SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Frame = +2
Query: 146 CASCNGNIRGPFITALGRIWCPE---HFICVNATC 241
C C G + P +T G ++C + H+I N TC
Sbjct: 57 CGICFGVLEDPLVTTCGHVFCSQCLVHWIAENGTC 91
>SB_37928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 218 FICVNATCRRPLQDIGFVEENGQLYCEFCFEQYIAPACDKCH 343
F C N C++ + +G VE + C+ CF Y +P C H
Sbjct: 113 FTCENPHCQKKEELLGIVELTFKS-CKACFTHYCSPECRILH 153
>SB_29293| Best HMM Match : Ant_C (HMM E-Value=2.2)
Length = 759
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = -1
Query: 339 HLSQAGAMYCSKQNSQ*SCPFSSTNPISCRGRLHVAFTQMKCS---GHHMRPRAVMNGPL 169
H + +GAMY ++ + + P T+P+ R A G+ RPR+V G L
Sbjct: 574 HPTPSGAMYRTRTSPEAQRPSPDTSPVLMRRLKKTAVVSPLLEVVEGNRPRPRSVPPGML 633
Query: 168 MFPLQDAQS 142
+F D +S
Sbjct: 634 LFDPTDPES 642
>SB_4027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = +2
Query: 416 CGKLFGNNPFFLEDG---LPYCEADWNELFT 499
CGK FG FL DG LP CE++ EL T
Sbjct: 65 CGKHFGTILNFLRDGSIPLPQCESELRELCT 95
>SB_29889| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 56 RGKTFGVSSAPKRGRGILNKPALPGSRVPL 145
RG +S+ K G + KP+L GSRVPL
Sbjct: 24 RGNAIVATSSKKAGSESVPKPSLAGSRVPL 53
>SB_10751| Best HMM Match : TNFR_c6 (HMM E-Value=7.6e-17)
Length = 738
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 7/70 (10%)
Frame = +2
Query: 230 NATCRRPLQDIGFVEENGQLYCEFCFE----QYIAPACDKCHAKIKGDCLNAIGKHF--H 391
N +C + F E C+ C + Q + AC+ H + GDC + F H
Sbjct: 207 NHSCVKCAPGKSFSESIDSSSCKPCSKCAVGQMVERACNSTHDTLCGDCSPGFYRDFSVH 266
Query: 392 PE-CFNCVYC 418
P C C YC
Sbjct: 267 PAVCGQCSYC 276
>SB_40925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 30
Score = 29.1 bits (62), Expect = 4.1
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +2
Query: 560 NNNYHSQCFNCTVCKKNLE 616
N+ +H +CF+C C+K L+
Sbjct: 3 NHKFHKKCFSCKDCRKKLD 21
>SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +2
Query: 386 FHPECFNCVYCGKLFGNNPFFLEDGLPYCEADW 484
+H CF C CG + LPYC+A +
Sbjct: 213 WHKGCFKCESCGMTLNMKTYKGYQKLPYCDAHY 245
>SB_17378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 580
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Frame = +2
Query: 386 FHPECFNCVYCGKLFGNNPFFLEDGLPYCEADWNELFTTKCF--ACGFPVEAGDRWVEAL 559
F C CV K + + + G P C NE F A +P+ G +
Sbjct: 220 FMMACAVCVQIAKAYSSQHPTMRKGDPKCPIHRNERFKDGITNGAAWYPISGGMQDY--- 276
Query: 560 NNNYHSQCFNCTV 598
N YHS CF T+
Sbjct: 277 -NYYHSNCFEITL 288
>SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20)
Length = 470
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 6/63 (9%)
Frame = +2
Query: 206 CPEHFI------CVNATCRRPLQDIGFVEENGQLYCEFCFEQYIAPACDKCHAKIKGDCL 367
C EHF C++ CR L+D+ G+L C C +Y D K+
Sbjct: 18 CIEHFTDPRLLPCLHTFCRHCLEDLAEHSGKGKLVCPLCKVEYEIAVADIPSLKVNFPIN 77
Query: 368 NAI 376
N I
Sbjct: 78 NLI 80
>SB_22835| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 594
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/95 (22%), Positives = 35/95 (36%), Gaps = 2/95 (2%)
Frame = +2
Query: 329 CDKCHAKIKG--DCLNAIGKHFHPECFNCVYCGKLFGNNPFFLEDGLPYCEADWNELFTT 502
C+ C G + + KH + F C CGK F + F + + NE
Sbjct: 296 CEMCEQDFPGQTELAEHVRKHVGEKPFECETCGKRFSSQGSF----KIHLNSHGNEK-PY 350
Query: 503 KCFACGFPVEAGDRWVEALNNNYHSQCFNCTVCKK 607
C CG ++ L ++ + + C +C K
Sbjct: 351 SCDVCGKAFRLRGNMLQHLRSHTLEKPYKCALCDK 385
>SB_17939| Best HMM Match : zf-C2H2 (HMM E-Value=1e-22)
Length = 203
Score = 29.1 bits (62), Expect = 4.1
Identities = 26/97 (26%), Positives = 34/97 (35%), Gaps = 2/97 (2%)
Frame = +2
Query: 329 CDKCHAKIKG--DCLNAIGKHFHPECFNCVYCGKLFGNNPFFLEDGLPYCEADWNELFTT 502
CDKC K + H F C YCGK F N L+ + Y
Sbjct: 107 CDKCGCGFKQLTHLTYHLRTHSDVRMFTCQYCGKGF-NQKGNLQAHV-YRHTGERPF--- 161
Query: 503 KCFACGFPVEAGDRWVEALNNNYHSQCFNCTVCKKNL 613
KC CG L + + + F C C+K+L
Sbjct: 162 KCHICGKGFTLASTRTTHLRTHTNEKPFQCKYCEKSL 198
>SB_8425| Best HMM Match : EGF (HMM E-Value=0)
Length = 1955
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 172 RSIHHGSWTHMVPRALHLRECNMQTSSAGYRIRRRE 279
R+ +HG WT P+ + + ECN +S + E
Sbjct: 1184 RTCNHGRWTGNDPQCVDINECNSASSPCAQQCTNTE 1219
>SB_51594| Best HMM Match : p450 (HMM E-Value=3.5e-35)
Length = 1208
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 87 GADDTPKVLPRVAAPTLEPLKTETASCRI 1
G D +PK+ R P LE ET +CRI
Sbjct: 1103 GRDVSPKLSQRKNIPVLEAFTAETHACRI 1131
>SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08)
Length = 584
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = +2
Query: 293 CEFCFEQYIAPACDKCHAKIKGDCLNAIGKHFHPECFNCVYC 418
C C EQY P C CL ++ +H + +C C
Sbjct: 16 CCLCLEQYQDPRVLACLHTYCRHCLESLAEHSQGDSISCPQC 57
>SB_15879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 28.3 bits (60), Expect = 7.1
Identities = 25/103 (24%), Positives = 39/103 (37%)
Frame = +2
Query: 401 FNCVYCGKLFGNNPFFLEDGLPYCEADWNELFTTKCFACGFPVEAGDRWVEALNNNYHSQ 580
F C CGK +N + L++ L + KC+ CG VE L + +
Sbjct: 69 FQCKECGKCITSN-YSLKEHLRIHSGEK----PLKCYECGKCFSHNSSLVEHLRVHSGEK 123
Query: 581 CFNCTVCKKNLEGQSFFAKGGRPFCKTHAR*KSNKNNLQLGHC 709
+ C +C G+ F R H R +N+ + HC
Sbjct: 124 PYKCDIC-----GRKFSLSSNR---DKHFRLHTNEKPFRCDHC 158
>SB_28163| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 28.3 bits (60), Expect = 7.1
Identities = 27/97 (27%), Positives = 32/97 (32%), Gaps = 2/97 (2%)
Frame = +2
Query: 329 CDKCHAKIKG--DCLNAIGKHFHPECFNCVYCGKLFGNNPFFLEDGLPYCEADWNELFTT 502
CDKC K + H F C YCGK F N L+ + Y
Sbjct: 21 CDKCGRGFKQLTHLTYHLRTHSDVRMFTCQYCGKGF-NQKGNLQAHV-YRHTGERPF--- 75
Query: 503 KCFACGFPVEAGDRWVEALNNNYHSQCFNCTVCKKNL 613
KC CG L + + F C CKK L
Sbjct: 76 KCHICGNSFTLASTRNTHLRTHAKEKPFQCKYCKKKL 112
>SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 604
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/42 (28%), Positives = 16/42 (38%)
Frame = +2
Query: 293 CEFCFEQYIAPACDKCHAKIKGDCLNAIGKHFHPECFNCVYC 418
C C EQY P C CL ++ +H +C C
Sbjct: 17 CSLCLEQYQDPRVLACLHTYCRHCLESLVEHSQERTVSCPQC 58
>SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1498
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/67 (20%), Positives = 27/67 (40%)
Frame = +2
Query: 239 CRRPLQDIGFVEENGQLYCEFCFEQYIAPACDKCHAKIKGDCLNAIGKHFHPECFNCVYC 418
C + IG ++ + + + + E + C + + ++ + H F C C
Sbjct: 1261 CDKSFSHIGALKAHAKTHGKSVGENTVCVTCSQVFSSLQ-EYQEHARSHQTQSSFECTEC 1319
Query: 419 GKLFGNN 439
GKLF N
Sbjct: 1320 GKLFSGN 1326
>SB_33873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1362
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 266 FVEENGQLYCEFCFEQYIAPACDKCHAKIKGDCLNAIGKHFHPECFNCV 412
FVE NGQ C +C ++ + C++ K G+ + K + CF C+
Sbjct: 331 FVEANGQGTCVYCLGKHKSENCER--FKSPGERKKILVK--YARCFRCL 375
>SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 462
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/42 (28%), Positives = 16/42 (38%)
Frame = +2
Query: 293 CEFCFEQYIAPACDKCHAKIKGDCLNAIGKHFHPECFNCVYC 418
C C EQY P C CL ++ +H +C C
Sbjct: 17 CSLCLEQYQDPRVLACLHTYCRHCLESLVEHSQERTVSCPQC 58
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,951,972
Number of Sequences: 59808
Number of extensions: 572799
Number of successful extensions: 1615
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1564
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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