Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30993
         (832 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001614-1|AAN71369.1|  867|Drosophila melanogaster RE33889p pro...    32   0.84 
AE013599-3901|AAF47228.1|  867|Drosophila melanogaster CG11414-P...    32   0.84 

>BT001614-1|AAN71369.1|  867|Drosophila melanogaster RE33889p
           protein.
          Length = 867

 Score = 32.3 bits (70), Expect = 0.84
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = +3

Query: 417 NVDVFPCGDLVPYACVECKIEFPIQ*NNNTCIIMCKYSKIIQS*YRLLSKMPKERYYFMN 596
           NV++F  GD     C EC     +    N C I C++  ++      L K+P       N
Sbjct: 54  NVEIFSIGDCDHPVCYECSTRMRVLCQQNECPI-CRH--VLSKVLFTLDKLPYRELEANN 110

Query: 597 KSFLY-RSVSVIFC 635
           +S LY +   + FC
Sbjct: 111 RSDLYSKKYRIGFC 124


>AE013599-3901|AAF47228.1|  867|Drosophila melanogaster CG11414-PA
           protein.
          Length = 867

 Score = 32.3 bits (70), Expect = 0.84
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = +3

Query: 417 NVDVFPCGDLVPYACVECKIEFPIQ*NNNTCIIMCKYSKIIQS*YRLLSKMPKERYYFMN 596
           NV++F  GD     C EC     +    N C I C++  ++      L K+P       N
Sbjct: 54  NVEIFSIGDCDHPVCYECSTRMRVLCQQNECPI-CRH--VLSKVLFTLDKLPYRELEANN 110

Query: 597 KSFLY-RSVSVIFC 635
           +S LY +   + FC
Sbjct: 111 RSDLYSKKYRIGFC 124


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,272,231
Number of Sequences: 53049
Number of extensions: 701340
Number of successful extensions: 1259
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1259
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)