Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30993
(832 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL022288-9|CAK55188.1| 452|Caenorhabditis elegans Hypothetical ... 31 1.3
AL022288-8|CAA18367.2| 402|Caenorhabditis elegans Hypothetical ... 31 1.3
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z72507-13|CAH60789.1| 515|Caenorhabditis elegans Hypothetical p... 29 4.1
Z72507-10|CAA96629.1| 531|Caenorhabditis elegans Hypothetical p... 29 4.1
Z47808-9|CAI46561.1| 425|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical pr... 28 9.4
AL110477-3|CAB54326.1| 314|Caenorhabditis elegans Hypothetical ... 28 9.4
AF003383-1|AAB54234.1| 379|Caenorhabditis elegans Hypothetical ... 28 9.4
>AL022288-9|CAK55188.1| 452|Caenorhabditis elegans Hypothetical
protein ZK1025.4b protein.
Length = 452
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Frame = -3
Query: 689 CLFISLYNKYGNI*NLCKTKNNANRSVQKRFIHKIISFFRH-------FT*QPILRLNNF 531
CL+ +++ Y N KN N S F HK+ +R F+ P ++ +N+
Sbjct: 11 CLYFTIFYVYPRFQNQSLLKNQINASFPITFYHKVYVDYRTSPPRLRIFSLNPCIKASNY 70
Query: 530 TILTHYYTRVIILL 489
++ YY I L
Sbjct: 71 LLVHVYYNGTITKL 84
>AL022288-8|CAA18367.2| 402|Caenorhabditis elegans Hypothetical
protein ZK1025.4a protein.
Length = 402
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Frame = -3
Query: 689 CLFISLYNKYGNI*NLCKTKNNANRSVQKRFIHKIISFFRH-------FT*QPILRLNNF 531
CL+ +++ Y N KN N S F HK+ +R F+ P ++ +N+
Sbjct: 11 CLYFTIFYVYPRFQNQSLLKNQINASFPITFYHKVYVDYRTSPPRLRIFSLNPCIKASNY 70
Query: 530 TILTHYYTRVIILL 489
++ YY I L
Sbjct: 71 LLVHVYYNGTITKL 84
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -3
Query: 629 NNANRSVQKRFIHKIISFFRHFT*QPILRLNNFTILTHYY 510
NNA +FI + F H + + I+ NF I THY+
Sbjct: 77 NNAKLGNLAKFIQRRSQLFYHMSFETIVSRENFAISTHYH 116
>Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical
protein R08B4.1a protein.
Length = 1137
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -3
Query: 629 NNANRSVQKRFIHKIISFFRHFT*QPILRLNNFTILTHYY 510
NNA +FI + F H + + I+ NF I THY+
Sbjct: 77 NNAKLGNLAKFIQRRSQLFYHMSFETIVSRENFAISTHYH 116
>Z72507-13|CAH60789.1| 515|Caenorhabditis elegans Hypothetical
protein F17C11.7b protein.
Length = 515
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/51 (41%), Positives = 26/51 (50%)
Frame = -1
Query: 157 FTYHSLWGLVSDPRKTLPTDSVPFNVFTLLAFGFVNVFLGICNYSYAFLVP 5
+T HS LV P +P S+PFNV +A F VF I YS +L P
Sbjct: 417 YTIHSNAILVLLP---VPDFSMPFNVICFVATAFALVFGPIQLYSTLWLAP 464
>Z72507-10|CAA96629.1| 531|Caenorhabditis elegans Hypothetical
protein F17C11.7a protein.
Length = 531
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/51 (41%), Positives = 26/51 (50%)
Frame = -1
Query: 157 FTYHSLWGLVSDPRKTLPTDSVPFNVFTLLAFGFVNVFLGICNYSYAFLVP 5
+T HS LV P +P S+PFNV +A F VF I YS +L P
Sbjct: 433 YTIHSNAILVLLP---VPDFSMPFNVICFVATAFALVFGPIQLYSTLWLAP 480
>Z47808-9|CAI46561.1| 425|Caenorhabditis elegans Hypothetical
protein D2013.8b protein.
Length = 425
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +3
Query: 687 TLVIFFANSYLI*KIKWRICSIKQVQRLSMTKT 785
T++ FFA +LI +W++ +KQ+Q M++T
Sbjct: 17 TVISFFAYVFLI--DRWKLRGVKQIQEQQMSET 47
>Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical
protein D2013.8a protein.
Length = 1087
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +3
Query: 687 TLVIFFANSYLI*KIKWRICSIKQVQRLSMTKT 785
T++ FFA +LI +W++ +KQ+Q M++T
Sbjct: 679 TVISFFAYVFLI--DRWKLRGVKQIQEQQMSET 709
>AL110477-3|CAB54326.1| 314|Caenorhabditis elegans Hypothetical
protein Y113G7B.4 protein.
Length = 314
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = -3
Query: 689 CLFISLYNKYGNI*NLCKTKNNANRSVQKRFIHKIISFFRHFT*QPILRLNNFTILT 519
C +IS Y+ N +N+ +S++K ++ I+ P LRL+NF I++
Sbjct: 84 CSYIS-YSPNSNNPGCTVERNSQRKSIEKTQLNAILDDLAVIVKNPKLRLDNFVIVS 139
>AF003383-1|AAB54234.1| 379|Caenorhabditis elegans Hypothetical
protein ZC250.2 protein.
Length = 379
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
Frame = +3
Query: 351 WGNTCLVARYI*DTFTDG*ETLNV----DVFPCGDLVPYACVECKIEFP 485
W + A+Y F E L + D F CGD + V+C I FP
Sbjct: 98 WSGFAIDAKYEFAQFLHKWENLRLHHHPDYFCCGDTIDSCIVKCSIPFP 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,563,236
Number of Sequences: 27780
Number of extensions: 400576
Number of successful extensions: 810
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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