SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30987
         (569 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    35   4e-04
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    26   0.20 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    25   0.60 
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    25   0.60 
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   3.2  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   3.2  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   3.2  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   3.2  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    22   3.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   4.2  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   5.6  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   7.4  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   7.4  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 35.1 bits (77), Expect = 4e-04
 Identities = 27/147 (18%), Positives = 64/147 (43%), Gaps = 1/147 (0%)
 Frame = +3

Query: 66  KYTYRSSGGGTTDVNIEYSADLSALSRLEDKIRLIQDDLESERELRQRIEREKADLSVQV 245
           +Y + SS GG+  V  +    L   +++   ++  Q +   E ++++ +++    +   +
Sbjct: 152 QYVWESSAGGSFTVTQDRGEPLGRGTKIVLHMKEDQTEFLEEHKIKEIVKKHSQFIGYPI 211

Query: 246 IQLSERLEEAE-GGAESQFEINRKRDTELLKLRKLLEDVHLESEETAHLLKKKNQEIVID 422
             + E+  E E    E++ E   +   +  K +  +EDV  + +E      KK ++ + +
Sbjct: 212 KLVVEKEREKELSDDEAEEEKKEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKKKTIKE 271

Query: 423 FQEQIDQLTKTKARAEKEKSKFQAEVY 503
              + ++L KTK    +       E Y
Sbjct: 272 KYTEDEELNKTKPIWTRNADDISQEEY 298



 Score = 30.3 bits (65), Expect = 0.012
 Identities = 23/89 (25%), Positives = 39/89 (43%)
 Frame = +3

Query: 276 EGGAESQFEINRKRDTELLKLRKLLEDVHLESEETAHLLKKKNQEIVIDFQEQIDQLTKT 455
           E  A   F + + R   L +  K++  +H++ ++T  L + K +EIV    + I    K 
Sbjct: 156 ESSAGGSFTVTQDRGEPLGRGTKIV--LHMKEDQTEFLEEHKIKEIVKKHSQFIGYPIKL 213

Query: 456 KARAEKEKSKFQAEVYELLAQVENVTKEK 542
               E+EK     E  E   + E   K+K
Sbjct: 214 VVEKEREKELSDDEAEEEKKEEEGEDKDK 242


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 26.2 bits (55), Expect = 0.20
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 274 LKAEPRASSRSTESVTPNSSSYANYWKMSIWS 369
           +K +   S+ ST S T  S++Y N    SIWS
Sbjct: 189 IKPQLHVSTGSTSSPTIASATYTNSANSSIWS 220


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 24.6 bits (51), Expect = 0.60
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = +2

Query: 296 VRDQQKA*HRTPQATQTTGRCPFGVRRDRPSAQEEEPRDRNRLPGTNRPAYQN*SQG*EG 475
           V + Q     T   TQ   R   G + + P+ Q++   ++N     N   +QN  QG +G
Sbjct: 324 VNEAQPYVRNTTVPTQGVARMSRGRQYNYPNPQQQYYYNKNHPNSENYINHQNYVQGYQG 383

Query: 476 E 478
           E
Sbjct: 384 E 384


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 24.6 bits (51), Expect = 0.60
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = +2

Query: 296 VRDQQKA*HRTPQATQTTGRCPFGVRRDRPSAQEEEPRDRNRLPGTNRPAYQN*SQG*EG 475
           V + Q     T   TQ   R   G + + P+ Q++   ++N     N   +QN  QG +G
Sbjct: 272 VNEAQPYVRNTTVPTQGVARMSRGRQYNYPNPQQQYYYNKNHPNSENYINHQNYVQGYQG 331

Query: 476 E 478
           E
Sbjct: 332 E 332


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +1

Query: 313 SVTPNSSSYANYWKMSIWSQKRPPI 387
           +V  N   Y NY+   + S   PPI
Sbjct: 73  NVLSNGYGYGNYYHPQLHSHHGPPI 97


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +1

Query: 313 SVTPNSSSYANYWKMSIWSQKRPPI 387
           +V  N   Y NY+   + S   PPI
Sbjct: 73  NVLSNGYGYGNYYHPQLHSHHGPPI 97


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +3

Query: 267 EEAEGGAESQFEINRKRDTELLKLRKLLEDVHLESEETAHL 389
           E    GAE   +I  +RD   L+   LL + +  S   +H+
Sbjct: 74  ENGHMGAEFPLDIMMRRDMSRLEKSPLLANGYNHSPHLSHM 114


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +1

Query: 313 SVTPNSSSYANYWKMSIWSQKRPPI 387
           +V  N   Y NY+   + S   PPI
Sbjct: 73  NVLSNGYGYGNYYHPQLHSHHGPPI 97


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +1

Query: 313 SVTPNSSSYANYWKMSIWSQKRPPI 387
           +V  N   Y NY+   + S   PPI
Sbjct: 73  NVLSNGYGYGNYYHPQLHSHHGPPI 97


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 325 NSSSYANYWKMSIWSQKRP 381
           NSSS  N  +  +WS+K P
Sbjct: 43  NSSSCGNGNRCDLWSEKFP 61


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 305 DLELALGSAFSFLKP 261
           D EL   SAFS++KP
Sbjct: 145 DDELRSSSAFSYIKP 159


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = -3

Query: 270 PQASQTVESLARSNLPSLFQSSDAALFRIPD 178
           PQ ++T ++     +P   +   + +FR+PD
Sbjct: 348 PQNAKTQKAFQVKRVPDPSKRKGSYIFRLPD 378


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +2

Query: 359 PFGVRRDRPSAQEEEPRDRNRLPGTN 436
           P+G ++   S      R+RNR+   N
Sbjct: 77  PYGPQQQPASVARRNARERNRVKQVN 102


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,446
Number of Sequences: 336
Number of extensions: 1528
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -