Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30987
         (569 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   3.7  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   3.7  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   3.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   3.7  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   4.9  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   8.6  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = -2

Query: 469 SALALVLVSWS-ICSWKSITISWFFFLSRW 383
           S  ALV+ SW+   SW+ IT ++F+F  R+
Sbjct: 195 SGYALVVYSWAKNDSWR-ITHNFFYFDPRY 223


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/37 (24%), Positives = 21/37 (56%)
 Frame = +3

Query: 414 VIDFQEQIDQLTKTKARAEKEKSKFQAEVYELLAQVE 524
           V+D +  +    +++    KE+ K + ++YE + QV+
Sbjct: 344 VMDCKVGVRTYLESELAKAKERPKLRKDMYEKMVQVD 380



 Score = 21.8 bits (44), Expect = 4.9
 Identities = 13/65 (20%), Positives = 34/65 (52%)
 Frame = +3

Query: 216 REKADLSVQVIQLSERLEEAEGGAESQFEINRKRDTELLKLRKLLEDVHLESEETAHLLK 395
           +EK+  +    Q +E+L + E  +++  E+N K++   +  R   +    E++E +++  
Sbjct: 59  KEKSKNNHHCNQDTEKLNQLEIESDNSKEVNDKKEENFIVDRLRNDLFECENKEKSNVCL 118

Query: 396 KKNQE 410
           K  ++
Sbjct: 119 KFEEQ 123


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/37 (24%), Positives = 21/37 (56%)
 Frame = +3

Query: 414 VIDFQEQIDQLTKTKARAEKEKSKFQAEVYELLAQVE 524
           V+D +  +    +++    KE+ K + ++YE + QV+
Sbjct: 259 VMDCKVGVRTYLESELAKAKERPKLRKDMYEKMVQVD 295


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/37 (24%), Positives = 21/37 (56%)
 Frame = +3

Query: 414 VIDFQEQIDQLTKTKARAEKEKSKFQAEVYELLAQVE 524
           V+D +  +    +++    KE+ K + ++YE + QV+
Sbjct: 578 VMDCKVGVRTYLESELAKAKERPKLRKDMYEKMVQVD 614


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -1

Query: 227 CLLSFNPLTQLSFGFQIILDETNLVLQPGEST 132
           CL+S+NPL Q     + + ++   +L+ G +T
Sbjct: 429 CLISWNPLMQPKQPIK-LFEQWKSILESGTTT 459


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 16  CRPRHEHRT 42
           CRPRHE R+
Sbjct: 522 CRPRHEIRS 530


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,858
Number of Sequences: 438
Number of extensions: 2155
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)