Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30986
         (408 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_02_0257 - 13533689-13533714,13533799-13533925,13534013-135341...    27   7.6  
03_02_0774 + 11074508-11074880,11076270-11076370,11076453-110765...    27   7.6  
01_01_0148 - 1337494-1338057                                           27   7.6  

>06_02_0257 -
           13533689-13533714,13533799-13533925,13534013-13534121,
           13534193-13534272,13534758-13534979,13536070-13536318,
           13537032-13537484,13539834-13540556
          Length = 662

 Score = 26.6 bits (56), Expect = 7.6
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -2

Query: 407 GGALPSIPLSFSFATILPPESKIFGFP 327
           GG  P +  SF    IL P+SK++GFP
Sbjct: 77  GGGGPGMTTSFR---ILCPQSKVYGFP 100


>03_02_0774 +
           11074508-11074880,11076270-11076370,11076453-11076509,
           11076596-11076690,11077480-11077579,11078272-11078330,
           11078874-11079001,11079362-11079440,11079708-11079795,
           11080490-11080590,11080822-11080900,11081740-11081850,
           11082655-11082750,11082885-11083007,11085750-11085947,
           11086071-11086172,11086570-11086634,11086888-11087008,
           11088540-11088697,11088823-11088973,11089414-11089521,
           11089939-11090031,11090285-11090321,11090659-11090906,
           11091396-11091542,11091929-11092099,11092166-11092175,
           11093360-11093505
          Length = 1114

 Score = 26.6 bits (56), Expect = 7.6
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -2

Query: 401 ALPSIPLSFSFATILPPESKIFGFPEAARRAIVVTSA 291
           A P  PL     T++PP +    FP   RR +   SA
Sbjct: 26  APPPRPLLLLPKTLIPPAAAAMEFPRRGRRDVAAASA 62


>01_01_0148 - 1337494-1338057
          Length = 187

 Score = 26.6 bits (56), Expect = 7.6
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 211 DENTFGKCFR*CSSCDDP 158
           DE   G+CFR C +C DP
Sbjct: 72  DELEPGQCFRQCEACRDP 89


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,271,829
Number of Sequences: 37544
Number of extensions: 218495
Number of successful extensions: 618
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 618
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 718652880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)