Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30983
         (766 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_4078| Best HMM Match : Sua5_yciO_yrdC (HMM E-Value=3e-32)           29   4.1  
SB_30225| Best HMM Match : Peptidase_S8 (HMM E-Value=0.0034)           29   5.4  
SB_53461| Best HMM Match : Amelogenin (HMM E-Value=0.099)              28   7.2  

>SB_4078| Best HMM Match : Sua5_yciO_yrdC (HMM E-Value=3e-32)
          Length = 303

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +3

Query: 459 LSPTITLAQQVQAAL*SPITHTLPEECTEEE 551
           L PT TLA Q  AA+ SPI+  L  +  +EE
Sbjct: 87  LEPTETLATQATAAMNSPISRRLIPDTQQEE 117


>SB_30225| Best HMM Match : Peptidase_S8 (HMM E-Value=0.0034)
          Length = 605

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +1

Query: 391 SHPTGTL-TGSSRTDYPREHKWLI*VQQLHSRSRYKRPY 504
           SHP+ +  +   RTD  R+H+ +  V+Q H + R KR +
Sbjct: 84  SHPSRSRRSAEDRTDQLRQHRHVTWVEQQHEKVREKRGF 122


>SB_53461| Best HMM Match : Amelogenin (HMM E-Value=0.099)
          Length = 2489

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = -2

Query: 321  YCSCDAIIKRVWASLDKLPNETSFSGYWKSLV 226
            YC C       W   D+  N +S   YWK L+
Sbjct: 2252 YCKCLLWSTEFWGVEDRAVNVSSLKAYWKRLL 2283


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,293,472
Number of Sequences: 59808
Number of extensions: 478890
Number of successful extensions: 912
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2072022557
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)