Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30983
(766 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73103-5|CAA97422.1| 380|Caenorhabditis elegans Hypothetical pr... 32 0.39
Z66520-12|CAN86922.1| 220|Caenorhabditis elegans Hypothetical p... 28 6.3
Z66520-11|CAA91383.1| 269|Caenorhabditis elegans Hypothetical p... 28 6.3
Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical pr... 28 8.4
U00065-2|AAL27237.1| 672|Caenorhabditis elegans Prion-like-(q/n... 28 8.4
AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical... 28 8.4
AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical... 28 8.4
>Z73103-5|CAA97422.1| 380|Caenorhabditis elegans Hypothetical
protein C08F8.6 protein.
Length = 380
Score = 32.3 bits (70), Expect = 0.39
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = -1
Query: 214 GCPSREYYKIMYAFSKGQIYHQTRKE-LAYIMRNLIVSMRTVTDWFSYCWETIAIYESEV 38
GCP REY I+ A KGQ + + E + Y++R + T + + Y WE + +++
Sbjct: 252 GCP-REYLDILEAIDKGQFFDEPNYERIYYLLREAM--KNTGSTEYPYDWEQSLMKKTKE 308
Query: 37 PRPQGKIG 14
+ + K G
Sbjct: 309 EQEKKKKG 316
>Z66520-12|CAN86922.1| 220|Caenorhabditis elegans Hypothetical
protein F49E12.9b protein.
Length = 220
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -1
Query: 679 WSANPSMSAIVCLPLLVAL*H*SPMLLSEEWCAS 578
W+A S+++I C PL A+ + SP+LL C S
Sbjct: 147 WTAPVSITSIYCHPLEHAISNLSPVLLGPTICGS 180
>Z66520-11|CAA91383.1| 269|Caenorhabditis elegans Hypothetical
protein F49E12.9a protein.
Length = 269
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -1
Query: 679 WSANPSMSAIVCLPLLVAL*H*SPMLLSEEWCAS 578
W+A S+++I C PL A+ + SP+LL C S
Sbjct: 147 WTAPVSITSIYCHPLEHAISNLSPVLLGPTICGS 180
>Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical protein
Y37A1B.17b protein.
Length = 1467
Score = 27.9 bits (59), Expect = 8.4
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Frame = -1
Query: 277 R*IAKRNKFLGLLEEPGVNTHGCPSREYYKIM--YAFSKGQIYHQTRKELAYIMRNLIVS 104
R I KRN L E G R++ +I Y Q+ Q K Y+ L S
Sbjct: 791 RLIKKRNDKLMDYEASRTKEKGLGKRDFAEIQKDYEALNTQVKQQLPKVTEYLTTVLATS 850
Query: 103 MRTVTDWFSYCWETI 59
MRTV++ ET+
Sbjct: 851 MRTVSEQDKALMETL 865
>Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical protein
Y37A1B.17a protein.
Length = 1538
Score = 27.9 bits (59), Expect = 8.4
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Frame = -1
Query: 277 R*IAKRNKFLGLLEEPGVNTHGCPSREYYKIM--YAFSKGQIYHQTRKELAYIMRNLIVS 104
R I KRN L E G R++ +I Y Q+ Q K Y+ L S
Sbjct: 791 RLIKKRNDKLMDYEASRTKEKGLGKRDFAEIQKDYEALNTQVKQQLPKVTEYLTTVLATS 850
Query: 103 MRTVTDWFSYCWETI 59
MRTV++ ET+
Sbjct: 851 MRTVSEQDKALMETL 865
>U00065-2|AAL27237.1| 672|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 25
protein.
Length = 672
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 38 NFRLVYGDCLPAITEPIC 91
N+RLVYG C+P IT IC
Sbjct: 262 NYRLVYGYCVP-ITSSIC 278
>AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 27.9 bits (59), Expect = 8.4
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Frame = -1
Query: 277 R*IAKRNKFLGLLEEPGVNTHGCPSREYYKIM--YAFSKGQIYHQTRKELAYIMRNLIVS 104
R I KRN L E G R++ +I Y Q+ Q K Y+ L S
Sbjct: 791 RLIKKRNDKLMDYEASRTKEKGLGKRDFAEIQKDYEALNTQVKQQLPKVTEYLTTVLATS 850
Query: 103 MRTVTDWFSYCWETI 59
MRTV++ ET+
Sbjct: 851 MRTVSEQDKALMETL 865
>AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 27.9 bits (59), Expect = 8.4
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Frame = -1
Query: 277 R*IAKRNKFLGLLEEPGVNTHGCPSREYYKIM--YAFSKGQIYHQTRKELAYIMRNLIVS 104
R I KRN L E G R++ +I Y Q+ Q K Y+ L S
Sbjct: 791 RLIKKRNDKLMDYEASRTKEKGLGKRDFAEIQKDYEALNTQVKQQLPKVTEYLTTVLATS 850
Query: 103 MRTVTDWFSYCWETI 59
MRTV++ ET+
Sbjct: 851 MRTVSEQDKALMETL 865
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,299,658
Number of Sequences: 27780
Number of extensions: 358810
Number of successful extensions: 742
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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