Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30977
         (618 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g31490.1 68414.m03855 transferase family protein contains sim...    28   5.7  
At5g18580.1 68418.m02196 tonneau 2 (TON2) identical to tonneau 2...    27   7.5  
At3g13480.1 68416.m01696 expressed protein ; expression supporte...    27   10.0 
At1g09280.2 68414.m01038 expressed protein contains Pfam profile...    27   10.0 
At1g09280.1 68414.m01037 expressed protein contains Pfam profile...    27   10.0 

>At1g31490.1 68414.m03855 transferase family protein contains
           similarity to anthranilate N-hydroxycinnamoyl
           benzoyltransferase GI:3288180, GI:2239091 from (Dianthus
           caryophyllus); contains Pfam profile PF02458 transferase
           family
          Length = 444

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -3

Query: 178 RRMHVRARAPPRHAPHL 128
           RR  +RAR+PPR+ PHL
Sbjct: 186 RRNLLRARSPPRYDPHL 202


>At5g18580.1 68418.m02196 tonneau 2 (TON2) identical to tonneau 2
           protein (TON2) GI:11494362 from [Arabidopsis thaliana];
           contains Pfam profile: PF00036 EF hand
          Length = 480

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -3

Query: 340 CKILNMQFFFFCKPNK 293
           C+I + +FFFFC P++
Sbjct: 237 CRIASQKFFFFCDPHR 252


>At3g13480.1 68416.m01696 expressed protein ; expression supported
           by MPSS
          Length = 205

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -3

Query: 340 CKILNMQFFFFCKPNKNIYPLG 275
           CKI    F  FCKP+ +IY  G
Sbjct: 6   CKIQCPSFICFCKPSPHIYASG 27


>At1g09280.2 68414.m01038 expressed protein contains Pfam profile:
           PF03959 domain of unknown function (DUF341)
          Length = 575

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 15/27 (55%), Positives = 16/27 (59%)
 Frame = +1

Query: 256 FRKNIKSLKGIYFCLAYKKKRIAYLVF 336
           FR+N  S KG    LA K K IA LVF
Sbjct: 356 FRQNASSFKGRTGSLAKKLKNIAELVF 382


>At1g09280.1 68414.m01037 expressed protein contains Pfam profile:
           PF03959 domain of unknown function (DUF341)
          Length = 581

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 15/27 (55%), Positives = 16/27 (59%)
 Frame = +1

Query: 256 FRKNIKSLKGIYFCLAYKKKRIAYLVF 336
           FR+N  S KG    LA K K IA LVF
Sbjct: 362 FRQNASSFKGRTGSLAKKLKNIAELVF 388


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,834,638
Number of Sequences: 28952
Number of extensions: 208019
Number of successful extensions: 436
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1246162608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)