Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30973
(749 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15; Bilater... 458 e-128
UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6; Metazoa|... 246 5e-64
UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71; Euteleo... 201 1e-50
UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes p... 196 5e-49
UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia ... 184 2e-45
UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep: ... 173 5e-42
UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistos... 159 5e-38
UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2; Caenorha... 142 6e-33
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 132 7e-30
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 126 8e-28
UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia a... 123 5e-27
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 120 3e-26
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 120 4e-26
UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2; Cryptosp... 114 2e-24
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 108 2e-22
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 104 2e-21
UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1; Strongyl... 100 3e-20
UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=... 93 5e-18
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 86 1e-15
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 84 3e-15
UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n... 77 5e-13
UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e, puta... 74 3e-12
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 74 4e-12
UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal ... 72 2e-11
UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis vi... 60 4e-08
UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7... 55 2e-06
UniRef50_A0EZZ8 Cluster: 60S ribosomal protein L6; n=5; Euteleos... 52 2e-05
UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1; Encephal... 48 2e-04
UniRef50_Q98RL7 Cluster: 60S ribosomal protein L6B; n=1; Guillar... 44 0.004
UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5; Archae... 41 0.037
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 40 0.065
UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8; Euryar... 40 0.086
UniRef50_A7QIH5 Cluster: Chromosome chr12 scaffold_103, whole ge... 39 0.11
UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14; Archa... 38 0.20
UniRef50_A2RKU3 Cluster: Cation-transporting ATPase; n=2; Lactoc... 36 1.1
UniRef50_Q4ZTN3 Cluster: Sensor protein; n=5; Pseudomonas|Rep: S... 34 4.3
UniRef50_A7ET80 Cluster: Putative uncharacterized protein; n=1; ... 34 4.3
UniRef50_Q6IMG0 Cluster: GRP21; n=11; Eukaryota|Rep: GRP21 - Ara... 33 5.7
UniRef50_A0JCX9 Cluster: Putative uncharacterized protein; n=1; ... 33 5.7
UniRef50_Q5KML3 Cluster: VpsB, putative; n=2; Basidiomycota|Rep:... 33 5.7
UniRef50_Q2HF67 Cluster: Putative uncharacterized protein; n=2; ... 33 5.7
UniRef50_A7E738 Cluster: Predicted protein; n=1; Sclerotinia scl... 33 5.7
UniRef50_Q66GS5 Cluster: At1g78120; n=2; Arabidopsis thaliana|Re... 33 7.5
UniRef50_Q5QLZ3 Cluster: Gastric mucin-like protein; n=4; Oryza ... 33 7.5
UniRef50_Q7NID4 Cluster: Gll2249 protein; n=8; Cyanobacteria|Rep... 33 9.9
UniRef50_A1WYA8 Cluster: TonB-dependent receptor precursor; n=2;... 33 9.9
UniRef50_Q0J1B9 Cluster: Os09g0451700 protein; n=2; Oryza sativa... 33 9.9
UniRef50_Q55S59 Cluster: Putative uncharacterized protein; n=2; ... 33 9.9
>UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15;
Bilateria|Rep: 60S ribosomal protein L6 - Bombyx mori
(Silk moth)
Length = 273
Score = 458 bits (1128), Expect = e-128
Identities = 224/247 (90%), Positives = 224/247 (90%)
Frame = -3
Query: 744 KKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXKLTVVVKQIGGEKNGGTRT 565
KKPRNYDLGNGVMRFSKSKMFHKKAKYKFIG KLTVVVKQIGGEKNGGTRT
Sbjct: 27 KKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKPKKLTVVVKQIGGEKNGGTRT 86
Query: 564 VPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGIL 385
VPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGIL
Sbjct: 87 VPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGIL 146
Query: 384 PSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXX 205
PSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF
Sbjct: 147 PSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNKKCVKRTV 206
Query: 204 XXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQ 25
KEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQ
Sbjct: 207 KRKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQ 266
Query: 24 YPHRLRF 4
YPHRLRF
Sbjct: 267 YPHRLRF 273
>UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6;
Metazoa|Rep: 60S ribosomal protein L6 - Drosophila
melanogaster (Fruit fly)
Length = 262
Score = 246 bits (602), Expect = 5e-64
Identities = 126/248 (50%), Positives = 159/248 (64%)
Frame = -3
Query: 747 RKKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXKLTVVVKQIGGEKNGGTR 568
+K P N L G++R+SK++M+ ++A Y+ VK+IGG KNGG R
Sbjct: 18 KKHPVNSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGER 77
Query: 567 TVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGI 388
TV LK+ K+ YPT+ ++ FS+H R R NL GTV ILLAGRH GKRVVL+ +
Sbjct: 78 TVFLKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKV 137
Query: 387 LPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXX 208
L SGLLLVTGPFA NSCPLRR+ QRYVIGTS+++ LG FK+P+H ND YF
Sbjct: 138 LASGLLLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLKAKKDKK 197
Query: 207 XXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSS 28
DIFA KKE++VP+EQRK DQK VD A++K I A P+ K YL+ F L SS
Sbjct: 198 TGEA---DIFAAKKERFVPNEQRKKDQKEVDAALLKVIKAHPEGKFFAKYLQNMFALHSS 254
Query: 27 QYPHRLRF 4
QYPHR+RF
Sbjct: 255 QYPHRMRF 262
>UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71;
Euteleostomi|Rep: 60S ribosomal protein L6 - Homo
sapiens (Human)
Length = 288
Score = 201 bits (491), Expect = 1e-50
Identities = 112/250 (44%), Positives = 149/250 (59%), Gaps = 6/250 (2%)
Frame = -3
Query: 735 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXKLTVVVKQIGGEKNGGTR 568
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 567 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLV 394
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 393 GILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXX 214
L SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF---KKKKL 222
Query: 213 XXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLR 34
+EG +IF T+KEKY +EQRK DQK VD ++ I A P L+GYL++ F L
Sbjct: 223 RKPRHQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALT 278
Query: 33 SSQYPHRLRF 4
+ YPH+L F
Sbjct: 279 NGIYPHKLVF 288
>UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes
pacificus|Rep: 60S ribosomal protein L6 - Ixodes
pacificus (western blacklegged tick)
Length = 268
Score = 196 bits (478), Expect = 5e-49
Identities = 107/247 (43%), Positives = 148/247 (59%), Gaps = 2/247 (0%)
Frame = -3
Query: 738 PRNYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXKLTVVVKQIGGEKNGGTRTVP 559
P+N+ L GV FS+SKMFHK+ +K K V VK++ GEKNGG R +P
Sbjct: 25 PKNHKLPGGVWLFSRSKMFHKRGLFKVKHAAPTKEKRKRKKRVTVKRVKGEKNGGKRVLP 84
Query: 558 LKRRKSFYPTQE--KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGIL 385
LK+ + YPT++ + + +S +P S+ +R + GTV ILLAG H GKRVV + L
Sbjct: 85 LKKERRSYPTEDSPQHKRTSHMKPSSRTRVALRKRITPGTVLILLAGPHRGKRVVFLKQL 144
Query: 384 PSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXX 205
+GLL VTGP+ N CPLRRI Q YVI TST++ L KLP+ +D YF
Sbjct: 145 KTGLLPVTGPYGVNGCPLRRINQIYVIATSTKLDLSKVKLPEGLDDRYF--KRNKGPKRG 202
Query: 204 XXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQ 25
EG +IF K +++V SE+ K Q VD+ V++A+ A P+KK+L YL A F LR+
Sbjct: 203 RKDEG-EIFEAKPQEHVVSEEHKKTQAEVDKQVLEAVKAHPEKKMLLHYLAATFSLRNRM 261
Query: 24 YPHRLRF 4
YPH+++F
Sbjct: 262 YPHKMKF 268
>UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia
franciscana|Rep: 60S ribosomal protein L6 - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 241
Score = 184 bits (448), Expect = 2e-45
Identities = 98/203 (48%), Positives = 131/203 (64%)
Frame = -3
Query: 612 VVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCIL 433
V+ K+IGG+KNGGTR V ++ FYP + + +K+ +IR +L+ GT+ IL
Sbjct: 44 VIEKKIGGDKNGGTRLVSTRKPPQFYPINSRQKRFHRRLVNNKNPPKIRKSLQPGTILIL 103
Query: 432 LAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHF 253
LAG + GKRVVL+ L SGLLLV+GP N PLRR+ Q+ VI TSTRI + N K+P+H
Sbjct: 104 LAGVNRGKRVVLLKALKSGLLLVSGPLKVNRVPLRRVHQKLVIATSTRIDISNVKVPEHI 163
Query: 252 NDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKK 73
ND YF KEG DIFA+K E+Y P+EQRK DQ VD ++KAI A+PD
Sbjct: 164 NDTYF----RRHKVKKEAKEG-DIFASKPERYTPTEQRKKDQAEVDVQLLKAIKAQPDAA 218
Query: 72 VLRGYLKAAFGLRSSQYPHRLRF 4
+L YL+ FGL+++ PHRL+F
Sbjct: 219 MLVKYLRTIFGLKNNMIPHRLKF 241
>UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 244
Score = 173 bits (420), Expect = 5e-42
Identities = 102/245 (41%), Positives = 139/245 (56%), Gaps = 1/245 (0%)
Frame = -3
Query: 735 RNYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXKLTVVVKQIGGEKNGGTRTVPL 556
RN +L G+ R+S+S ++ K+A YK T K IGG+KNGG R VP+
Sbjct: 11 RNPELAPGISRYSRSAIYKKRALYKRKKTGVKKVVQDEPRTKT-KDIGGDKNGGKRVVPV 69
Query: 555 KRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSG 376
+R +YPT++ +R R + ++R ++ GTV ILLAG H GKRVV + L SG
Sbjct: 70 QRESRYYPTED-VRRRLANRK-KPGMAKLRSSITPGTVLILLAGAHRGKRVVFLKQLNSG 127
Query: 375 LLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKH-FNDDYFXXXXXXXXXXXXX 199
LLLVTGPF N PLRRIPQ YVI TST I + + KLP+H F D+ +
Sbjct: 128 LLLVTGPFKINGVPLRRIPQSYVIATSTHIDVSDVKLPEHAFADESY-----FKGEPKKK 182
Query: 198 KEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYP 19
K +D+F E+ PSEQR DQK VD+ ++ I A P+ ++ YL + F LR Q+P
Sbjct: 183 KRSEDMFEEAAEEKKPSEQRIADQKAVDDQILPKISAVPN---MKKYLSSLFSLRKGQFP 239
Query: 18 HRLRF 4
H + F
Sbjct: 240 HDMVF 244
>UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistosoma
japonicum|Rep: 60S ribosomal protein L6 - Schistosoma
japonicum (Blood fluke)
Length = 238
Score = 159 bits (387), Expect = 5e-38
Identities = 85/189 (44%), Positives = 113/189 (59%), Gaps = 3/189 (1%)
Frame = -3
Query: 561 PLKRRKSFYPTQE---KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVG 391
P R Y TQ+ K+R + FS HVR+IR +++ GTV ILLAG H GKRV+ +
Sbjct: 55 PKTRFPRSYVTQQGKRKLRLRRA-KCFSNHVRKIRSSIQPGTVLILLAGPHKGKRVIFLK 113
Query: 390 ILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXX 211
L SGLLLVTGPF +N PLRR+ Q YVI TSTRI + F +PKH +D+YF
Sbjct: 114 ALKSGLLLVTGPFKYNGVPLRRVNQCYVIATSTRIDISKFDVPKHIDDEYF----RRVDL 169
Query: 210 XXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRS 31
+ +F+T+ +KY S+ RK DQK VD + AI + PD K+L YL++ F L
Sbjct: 170 KESKTDAGKLFSTETKKYTVSDIRKEDQKLVDNQIRAAIKSHPDSKILHAYLRSLFSLGK 229
Query: 30 SQYPHRLRF 4
YPH++ F
Sbjct: 230 RDYPHKMIF 238
>UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2;
Caenorhabditis|Rep: 60S ribosomal protein L6 -
Caenorhabditis elegans
Length = 217
Score = 142 bits (345), Expect = 6e-33
Identities = 76/157 (48%), Positives = 97/157 (61%), Gaps = 1/157 (0%)
Frame = -3
Query: 471 IRPNLKIGTVCILLAGRHAGKRVVLVGILP-SGLLLVTGPFAFNSCPLRRIPQRYVIGTS 295
+R L GTV I+LAGRH GKRVV + LP SGLLLVTGP N PLRRI Q +VI TS
Sbjct: 67 LRKTLTPGTVLIVLAGRHKGKRVVFLKQLPQSGLLLVTGPHKINGFPLRRIGQAFVIATS 126
Query: 294 TRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVD 115
++++ K+P+H ND+YF G +IFA+ K +Y SEQRK D KTVD
Sbjct: 127 LKVNVSGVKIPEHINDEYFKRKSTAQKT------GKNIFASGKTEYTVSEQRKKDIKTVD 180
Query: 114 EAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHRLRF 4
++ AI P+ K L GYL F L +QYPH+++F
Sbjct: 181 APILAAIKKHPEHKFLFGYLGTRFSLGKNQYPHKMQF 217
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 132 bits (320), Expect = 7e-30
Identities = 92/247 (37%), Positives = 127/247 (51%)
Frame = -3
Query: 744 KKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXKLTVVVKQIGGEKNGGTRT 565
K RN DL GV ++S+S+M+HK+ + + V
Sbjct: 9 KVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKV-------------D 55
Query: 564 VPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGIL 385
P+++ FYP ++ ++ R +K + +R ++ GTV I+LAGR GKRVV + L
Sbjct: 56 APVEKPPKFYPAED-VKKPLPNRRTAKPAK-LRASITPGTVLIILAGRFKGKRVVFLKQL 113
Query: 384 PSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXX 205
SGLLLVTGPF N PLRR+ Q YVIGTST++ + L K F+D YF
Sbjct: 114 ASGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDISGVTLDK-FDDKYF---GKVAEKKK 169
Query: 204 XXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQ 25
EG+ A K+EK + +K DQK VD A+IKAI A P+ L+ YL A F L+
Sbjct: 170 KKTEGEFFEAEKEEKKEIPQGKKDDQKAVDAALIKAIEAVPE---LKTYLGARFSLKQGM 226
Query: 24 YPHRLRF 4
PH L F
Sbjct: 227 KPHELVF 233
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 126 bits (303), Expect = 8e-28
Identities = 76/204 (37%), Positives = 105/204 (51%)
Frame = -3
Query: 618 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVC 439
+ ++ K IGG KNGG R VP K+ +YP +K + K + +RP++K GT+
Sbjct: 20 IKMIKKPIGGAKNGGYRLVPEKKGPKWYPADDKKTPVPSRKNVHKPTK-LRPSIKSGTIV 78
Query: 438 ILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPK 259
ILLAG G RVV++ L SG LLVTGP+A N PL R+ QRYVI TST I + + K
Sbjct: 79 ILLAGVFRGSRVVVLKQLDSGQLLVTGPYAVNRIPLTRVDQRYVIATSTSIDVSKVDV-K 137
Query: 258 HFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPD 79
++ YF D ++K E R DQK +D ++ I P
Sbjct: 138 KIDNAYFRKPQKKKKTDVMEV---DTAKKDEQKTKAIEARIADQKAIDAVLLPVIEKEP- 193
Query: 78 KKVLRGYLKAAFGLRSSQYPHRLR 7
+L YLK F L+ QYPH ++
Sbjct: 194 --LLSSYLKVKFSLKKGQYPHAMK 215
>UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia
asiatica|Rep: 60S ribosomal protein L6 - Taenia asiatica
(Asian tapeworm)
Length = 212
Score = 123 bits (296), Expect = 5e-27
Identities = 66/132 (50%), Positives = 81/132 (61%)
Frame = -3
Query: 492 FSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQR 313
F+ H RRIR ++ G V ILLAGRH KRVV + L SGLLLVTGPF +N PLRR+ QR
Sbjct: 86 FADHRRRIRKSITPGKVLILLAGRHRAKRVVFLKSLASGLLLVTGPFKYNGVPLRRVNQR 145
Query: 312 YVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKT 133
YVI T TRI + N K+P ND++F D IFA +++KY S+ RK
Sbjct: 146 YVIATKTRIKIKNIKIPSQLNDEFFRRQDLKTKKSV-----DKIFAEEEKKYTVSDDRKK 200
Query: 132 DQKTVDEAVIKA 97
QK VD A+I A
Sbjct: 201 LQKQVDTALIAA 212
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 120 bits (290), Expect = 3e-26
Identities = 81/182 (44%), Positives = 104/182 (57%), Gaps = 3/182 (1%)
Frame = -3
Query: 540 FYPTQE-KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLV 364
FYP + K R S +P + ++R ++ GTV ILLAGR GKRVV + L SGLLLV
Sbjct: 53 FYPADDVKPRQPSTRKP---NPTKLRSSITPGTVLILLAGRFMGKRVVFLKQLKSGLLLV 109
Query: 363 TGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGDD 184
TGPF N P+RR+ Q YVI TST++ + + K F+D YF EG +
Sbjct: 110 TGPFKINGVPIRRVNQPYVIATSTKVDISGVNVEK-FDDKYF---SRDKKQKAKKTEG-E 164
Query: 183 IFATKKE--KYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHRL 10
+F T+KE K +P E +K DQK VD +IKAI A PD L+ YL A F LR PH +
Sbjct: 165 LFETEKEATKNLP-EFKKEDQKVVDAELIKAIEAVPD---LKTYLGARFSLRDGDKPHEM 220
Query: 9 RF 4
F
Sbjct: 221 VF 222
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 120 bits (289), Expect = 4e-26
Identities = 73/191 (38%), Positives = 103/191 (53%)
Frame = -3
Query: 576 GTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL 397
G R + K K +IR+++ + K +R ++ GTV I+LAGR AGKRVV
Sbjct: 54 GKRVIAAKASKFAPSIPAEIRSTAAKKVQQKVA--LRKSITPGTVLIILAGRFAGKRVVA 111
Query: 396 VGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXX 217
+ L SGL+L+TGPF N PLRRI QRYVI TST+I + + K+ ND YF
Sbjct: 112 LKQLDSGLILITGPFKVNGVPLRRIDQRYVIATSTKIDVSSVKVAATINDAYFAAEKKST 171
Query: 216 XXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGL 37
D+ K EK ++ R DQK+VD A++ + +K L YLK F L
Sbjct: 172 TKSEGAFFSDE---KKAEKKKIADSRVADQKSVDSAILAVL---KKEKFLTVYLKTKFYL 225
Query: 36 RSSQYPHRLRF 4
+ ++PH+L+F
Sbjct: 226 KKGEFPHQLKF 236
>UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L6 -
Cryptosporidium hominis
Length = 184
Score = 114 bits (275), Expect = 2e-24
Identities = 66/171 (38%), Positives = 97/171 (56%)
Frame = -3
Query: 516 RASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSC 337
R S R S ++R +L+ G VCILLAG + GKRVV++ LPSGL++VTGP+A N
Sbjct: 20 RKYSSRRKASVVAPKLRSSLQPGVVCILLAGPYKGKRVVMLKALPSGLVVVTGPYALNGV 79
Query: 336 PLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKY 157
P+RR+ Y+I TST++ + + K F D+YF D TK +
Sbjct: 80 PVRRVNPAYIIATSTKVDVSKADVSK-FTDEYFKVDRSKLKKSKDAFM-DQGEETKVNRV 137
Query: 156 VPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHRLRF 4
V SE+RK Q+ +D ++I +I + P ++ YLK F L S +PH+L+F
Sbjct: 138 V-SEERKKTQQALDASIIPSIQSNP---LMMSYLKTRFTLTSGMFPHKLKF 184
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 108 bits (259), Expect = 2e-22
Identities = 74/214 (34%), Positives = 110/214 (51%), Gaps = 10/214 (4%)
Frame = -3
Query: 615 TVVVKQIGGEKN--GGTRTVPLKRRKS--FYPTQEKIRASSGGRPFSKHVRRIRPNLKIG 448
T+ K +G K G R +P +K+ +YP ++ + + + H ++RP+L+ G
Sbjct: 4 TLDSKSVGQTKKFGKGERVIPHPSQKAQKWYPADDEPQPKKARK--TAHPTKLRPSLQPG 61
Query: 447 TVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNF- 271
T+ ILLAGR GKRV+L+ L G+LLVTGPF N PLRR+ RYVI TS+ + L
Sbjct: 62 TILILLAGRFRGKRVILLKHLGQGVLLVTGPFKLNGVPLRRVNARYVIATSSTVDLNGVD 121
Query: 270 --KLPKHFNDDYFXXXXXXXXXXXXXKEGDDIF---ATKKEKYVPSEQRKTDQKTVDEAV 106
L K +YF K+G++ F K EK + R DQK +D+A+
Sbjct: 122 QKTLEKVSQPEYF------TREKAEQKKGEEAFFKQGEKPEKKKVASARAADQKAIDQAL 175
Query: 105 IKAIGARPDKKVLRGYLKAAFGLRSSQYPHRLRF 4
+ I P L YL + F LR+ PH +++
Sbjct: 176 LATIKKEP---FLGSYLASTFSLRTGDKPHEMKW 206
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 104 bits (250), Expect = 2e-21
Identities = 68/184 (36%), Positives = 105/184 (57%)
Frame = -3
Query: 555 KRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSG 376
++ +YP+++ + A R ++ +++R +L GTV ILLAGR GKRVV + L
Sbjct: 4 QKAPKWYPSED-VAALKKTRKAARP-QKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDN 61
Query: 375 LLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXK 196
LL++GPF N PLRR+ RYVI TST++S+ + K FN +YF K
Sbjct: 62 TLLISGPFKVNGVPLRRVNARYVIATSTKVSVEGVNVEK-FNVEYF----AKEKLTKKEK 116
Query: 195 EGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPH 16
+ ++F ++ K + +E R DQK VD+A+I I P +L+ YL A+F L++ PH
Sbjct: 117 KEANLFPEQQNKEIKAE-RVEDQKVVDKALIAEIKKTP---LLKQYLSASFSLKNGDKPH 172
Query: 15 RLRF 4
L+F
Sbjct: 173 MLKF 176
>UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1;
Strongyloides papillosus|Rep: 60S ribosomal protein L6 -
Strongyloides papillosus
Length = 127
Score = 100 bits (240), Expect = 3e-20
Identities = 51/124 (41%), Positives = 69/124 (55%)
Frame = -3
Query: 375 LLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXK 196
L GPF+ N P+RRI Q++V+ TST+I + K+P DDYF
Sbjct: 10 LFTFLGPFSINGVPVRRIAQKFVLPTSTKIDVSGVKIPATMTDDYFKRTKYFGK------ 63
Query: 195 EGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPH 16
E DIF K++Y ++ RK DQKT+D AV+ +I D K+L GYL+ FGL QYPH
Sbjct: 64 EKKDIFEQGKQEYTLTDARKADQKTIDTAVLGSIKKHTDGKLLAGYLRTNFGLSKRQYPH 123
Query: 15 RLRF 4
+ F
Sbjct: 124 NMVF 127
>UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L6e, putative -
Theileria parva
Length = 212
Score = 93.5 bits (222), Expect = 5e-18
Identities = 74/208 (35%), Positives = 104/208 (50%), Gaps = 21/208 (10%)
Frame = -3
Query: 564 VPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGIL 385
V L RRK+ K + GR ++ V ++R +LK G V ILL G + GKRVVL+ +L
Sbjct: 12 VKLNRRKTVVTRLGKTKVV--GRKYAS-VPKVRESLKPGAVLILLTGSYKGKRVVLLKVL 68
Query: 384 PSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXX 205
SGLLLVTGPF+FN PLRR+ RYVI TST + ++ P++
Sbjct: 69 KSGLLLVTGPFSFNGVPLRRVNSRYVIATSTNV----YEFPEYDGSSLKSSVERAVSDLT 124
Query: 204 XXKEGDD------IFATKKEKYVPSEQRKTDQKTVDE------AVIKAIGARPD------ 79
G F +K+K + D+ +V E A +KA+ ++ D
Sbjct: 125 DESFGKTKETKLAEFKDRKKKNKNKDSMFVDEPSVSEKSPELMAKLKALQSKVDDVLVPS 184
Query: 78 -KKV--LRGYLKAAFGLRSSQYPHRLRF 4
KK L YLK+ F LR++ YPH L+F
Sbjct: 185 LKKSQHLTKYLKSRFTLRNNMYPHLLKF 212
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 85.8 bits (203), Expect = 1e-15
Identities = 63/175 (36%), Positives = 87/175 (49%), Gaps = 3/175 (1%)
Frame = -3
Query: 519 IRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNS 340
+R RP + +R+I P G V ILL+GR GKRVV + L SGLLLVTGPF N
Sbjct: 44 VRKRKAPRPAT--LRKIVP----GQVLILLSGRFQGKRVVFLKQLKSGLLLVTGPFKING 97
Query: 339 CPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF---XXXXXXXXXXXXXKEGDDIFATK 169
PL+R+ YVI TST++ + NDDYF K G+ +
Sbjct: 98 VPLKRVNSAYVIPTSTKVDVTGVN-ANQINDDYFKRTQAQRRKNEQGFWAKRGELTVEQQ 156
Query: 168 KEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHRLRF 4
+ + ++ QK+VD A+I AI ++L+ YL A F + + PH L F
Sbjct: 157 TAEKTRLDGKRNTQKSVDAALITAI---KKTQLLKQYLGARFTIGKTTRPHELVF 208
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 84.2 bits (199), Expect = 3e-15
Identities = 72/192 (37%), Positives = 91/192 (47%), Gaps = 27/192 (14%)
Frame = -3
Query: 498 RPFSKHVRRIRPNLKI--GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRR 325
RP K +R P + GTV ILLAGR GKRVVL+ L G+LLVTGPF N PLRR
Sbjct: 24 RPVRKTIRPWSPRSTLVPGTVLILLAGRFRGKRVVLLKALDQGVLLVTGPFKINGVPLRR 83
Query: 324 IPQRYVIGTSTRISLGNF---KL-----PKHF---------NDDYFXXXXXXXXXXXXXK 196
+ RYVI TS ++ L K+ PK+F ++ F
Sbjct: 84 VNARYVIATSQKVDLAGIDEAKINEIAQPKYFTAEKSKEKAGEEAFFKQGEKPQVRLGNS 143
Query: 195 E------GDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKV--LRGYLKAAFG 40
E DI KKE S R DQK +D+A+I I KKV L YL ++F
Sbjct: 144 ELEHGAHNADIVMQKKE---VSSSRVADQKAIDKALIANI-----KKVEFLASYLASSFT 195
Query: 39 LRSSQYPHRLRF 4
LR PH +++
Sbjct: 196 LRKGDKPHEMKW 207
>UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC20AA UniRef100 entry -
Rattus norvegicus
Length = 261
Score = 77.0 bits (181), Expect = 5e-13
Identities = 71/242 (29%), Positives = 111/242 (45%)
Frame = -3
Query: 735 RNYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXKLTVVVKQIGGEKNGGTRTVPL 556
RN L G R+S ++ +K Y + + V+K + G+KNGGT V L
Sbjct: 49 RNPILVRGTGRYSIKALYERK--YSAVKSKCEKKKKEKVVATVIKTVSGDKNGGTGVVKL 106
Query: 555 KRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSG 376
++ K + + + + S P KH + + N TV I++ G+H +RVV + L G
Sbjct: 107 QKMKMYLGSCKAMAKS----PAFKHEKAVC-NSTPETVLIIITGQH--RRVVFLKQLSRG 159
Query: 375 LLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXK 196
LL+TGP A N L R Q+ V+ TST I+ D YF
Sbjct: 160 FLLITGPLALNLVLLYRTHQKSVVITSTTINTQ--------TDVYF----KMKQLHKPRH 207
Query: 195 EGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPH 16
+ IF +K+KY +Q K D KT+D ++ P +K+ +L ++F L + PH
Sbjct: 208 QQGKIFDMEKDKY-GIKQCKADHKTLDSQIL------PKRKL---FLNSSFSLANGMCPH 257
Query: 15 RL 10
+L
Sbjct: 258 KL 259
>UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L6e, putative - Plasmodium chabaudi
Length = 241
Score = 74.1 bits (174), Expect = 3e-12
Identities = 66/226 (29%), Positives = 106/226 (46%), Gaps = 24/226 (10%)
Frame = -3
Query: 609 VVKQIGGEKNGGTRTVPLKRRKSFYPTQEK--IRASSGGRPFS---KHV--RRIRPNLKI 451
VV G +KN V ++K P + K I GR + K V R++R ++++
Sbjct: 17 VVPATGDKKNALKHYVIKGQKKILTPVRAKKTISKKHYGRKLASKKKFVVQRKMRSSIQV 76
Query: 450 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRI----S 283
G V I+L G+H GKR ++ +L SGLL V GP+ N PL+R+ RY+I TST I +
Sbjct: 77 GKVAIILTGKHMGKRCIIAKVLKSGLLAVVGPYEVNGVPLKRVDPRYLIVTSTNIFDFNN 136
Query: 282 LGNFK-----LPKHFNDDYF--XXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQK 124
L K + ND+ F + + +F + + E R +D K
Sbjct: 137 LSQVKEKFIQSAERINDEIFIKSMDVKKRQKKLLKNKNESLFMNDVIQKI-KEIRDSDPK 195
Query: 123 TVDEAVI-KAIG--ARPD---KKVLRGYLKAAFGLRSSQYPHRLRF 4
++ K +G +P+ K+ R Y+K+ F LR++ H + F
Sbjct: 196 MKKIKLLQKELGDLLKPEISKDKMFRSYIKSKFTLRNNMSFHNMNF 241
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 73.7 bits (173), Expect = 4e-12
Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 11/164 (6%)
Frame = -3
Query: 471 IRPNLKIGTVCILLAGRHAGKRVVLVGILP-SGLLLVTGPFAFNSCPLRRIPQRYVIGTS 295
+R + G + I+LAGR G+R V++ LP +G L+V+GP +N P+RRI RYVI TS
Sbjct: 29 LRKSCAPGAIAIILAGRFRGRRAVILKQLPHNGPLVVSGPMKYNGVPIRRIDSRYVIATS 88
Query: 294 TRISLGN----------FKLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSE 145
T + + + F+ PK ++ + +K + S+
Sbjct: 89 TTVDISSVDTAPITAEVFQRPKAEKPTKSEGDFMGDKQKAKAEKAAKKTSKAGKKTLVSD 148
Query: 144 QRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHR 13
R QK +D A+I AI K GYL++ F ++ PHR
Sbjct: 149 ARAQLQKKIDAALIAAIKKDAQGKEKAGYLRSVFTVKPGDAPHR 192
>UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal
protein L6; n=5; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L6 - Rattus norvegicus
Length = 112
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/70 (52%), Positives = 43/70 (61%)
Frame = -3
Query: 447 TVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFK 268
TV I+L GRH GKRVV + L SGLLLVTGP A N PL R+ Q VI T T++ + K
Sbjct: 13 TVLIILTGRHRGKRVVFLKQLGSGLLLVTGPLALNRVPLCRMHQSVVISTFTKVDICKVK 72
Query: 267 LPKHFNDDYF 238
KH D F
Sbjct: 73 TSKHLTDASF 82
>UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis
vinifera|Rep: 60S ribosomal protein L6 - Vitis vinifera
(Grape)
Length = 249
Score = 60.5 bits (140), Expect = 4e-08
Identities = 30/58 (51%), Positives = 38/58 (65%)
Frame = -3
Query: 411 KRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 238
KRVV + L SGLLL+TG F N PLRR+ Q YVI TST++ + + K F+D YF
Sbjct: 156 KRVVFLKQLSSGLLLITGSFKINGVPLRRVNQAYVIATSTKVDIPKVNVEK-FDDKYF 212
>UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 151
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = -3
Query: 468 RPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTR 289
RP+LK+GTV I++ G H GKR V+V +G++ + GP P+ I Q Y+I TST
Sbjct: 53 RPSLKVGTVVIVVGGEHQGKRAVVVADQGAGIVKIAGPVV----PVNEISQDYLIATSTS 108
Query: 288 ISL 280
I +
Sbjct: 109 IEV 111
>UniRef50_A0EZZ8 Cluster: 60S ribosomal protein L6; n=5;
Euteleostomi|Rep: 60S ribosomal protein L6 -
Scophthalmus maximus (Turbot)
Length = 54
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/55 (47%), Positives = 34/55 (61%)
Frame = -3
Query: 168 KEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHRLRF 4
KEKY +EQRK DQK VD ++ + P LRGYL+++F L YPH+L F
Sbjct: 3 KEKYQLTEQRKEDQKAVDAQLLTLVKKTPQ---LRGYLRSSFCLSGGVYPHKLVF 54
>UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L6 -
Encephalitozoon cuniculi
Length = 155
Score = 48.4 bits (110), Expect = 2e-04
Identities = 31/82 (37%), Positives = 45/82 (54%)
Frame = -3
Query: 525 EKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAF 346
EK +A + +P VRR +L G V ++L G A +RVV + L + L GP +
Sbjct: 10 EKYKARTARKP---RVRRT--DLVKGMVVVVLEGVFASRRVVYLKGLEDNIALCAGPKSI 64
Query: 345 NSCPLRRIPQRYVIGTSTRISL 280
N PL RI +RY++ TST + L
Sbjct: 65 NGIPLFRIDERYLLATSTVLDL 86
>UniRef50_Q98RL7 Cluster: 60S ribosomal protein L6B; n=1; Guillardia
theta|Rep: 60S ribosomal protein L6B - Guillardia theta
(Cryptomonas phi)
Length = 169
Score = 44.0 bits (99), Expect = 0.004
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = -3
Query: 462 NLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRIS 283
+ KIG + I+ + GK+ V +G G LL++G FN +I +YV+ + +
Sbjct: 41 DFKIGDILIIKKRNNYGKKCVFLGHTDDGNLLLSGIMKFNGIGYLKIHWKYVVKSGVSLK 100
Query: 282 LGNFKLPKHFNDDY 241
NF L KH N DY
Sbjct: 101 GLNF-LTKHTNKDY 113
>UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5;
Archaea|Rep: 50S ribosomal protein L14e - Pyrococcus
furiosus
Length = 83
Score = 40.7 bits (91), Expect = 0.037
Identities = 18/53 (33%), Positives = 33/53 (62%)
Frame = -3
Query: 465 PNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYV 307
P + +G + +++AGR AG++VV+V I+ +LVTG N RR+ +++
Sbjct: 2 PAIDVGRIAVVIAGRRAGQKVVVVDIIDKNFVLVTGA-GLNKVKRRRMNIKHI 53
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 39.9 bits (89), Expect = 0.065
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = -3
Query: 468 RPNLKIGTVCILLAGRHAGKRVVLVGILP 382
+P +K G VCI+L GRHAGK+ V+V LP
Sbjct: 3 QPIIKPGLVCIVLQGRHAGKKAVIVEALP 31
>UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L14e -
Methanococcus jannaschii
Length = 80
Score = 39.5 bits (88), Expect = 0.086
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = -3
Query: 465 PNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRI 322
P +++G VCI AGR AGK V+V IL ++V G C ++ +
Sbjct: 2 PAIEVGRVCIKTAGREAGKVCVIVDILDKNFVIVDGLVKRRRCNIKHL 49
>UniRef50_A7QIH5 Cluster: Chromosome chr12 scaffold_103, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_103, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 345
Score = 39.1 bits (87), Expect = 0.11
Identities = 26/69 (37%), Positives = 39/69 (56%)
Frame = -3
Query: 540 FYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVT 361
FYP + ++ + +K ++ +R ++ GTV I+LAGR VV + L SGLLL+T
Sbjct: 207 FYPADD-VKKPLINKHKAKPIK-LRASITPGTVLIILAGR-----VVFLKQLSSGLLLIT 259
Query: 360 GPFAFNSCP 334
G F N P
Sbjct: 260 GSFKINDVP 268
>UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14;
Archaea|Rep: 50S ribosomal protein L14e - Pyrobaculum
aerophilum
Length = 103
Score = 38.3 bits (85), Expect = 0.20
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = -3
Query: 459 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISL 280
+ IG V + + GR AG++ V+V I+ +++TGP RR+ ++ T +I +
Sbjct: 5 IDIGRVVVKVLGREAGRKAVVVDIVDENYVVITGPKPITGVKRRRVNINHIEPTDKKIDI 64
>UniRef50_A2RKU3 Cluster: Cation-transporting ATPase; n=2;
Lactococcus lactis subsp. cremoris|Rep:
Cation-transporting ATPase - Lactococcus lactis subsp.
cremoris (strain MG1363)
Length = 841
Score = 35.9 bits (79), Expect = 1.1
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = -3
Query: 408 RVVLVGILPSGLLLVTGPFAFNSCPLRRIPQR--YVIGTSTRIS 283
+++++GI+P +L++ F F+S L IPQR +IGT+ I+
Sbjct: 215 KIIVIGIIPISILVLLNQFVFSSLDLSVIPQRKTAIIGTAATIT 258
>UniRef50_Q4ZTN3 Cluster: Sensor protein; n=5; Pseudomonas|Rep:
Sensor protein - Pseudomonas syringae pv. syringae
(strain B728a)
Length = 676
Score = 33.9 bits (74), Expect = 4.3
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = -3
Query: 501 GRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFN 343
GR ++ R++RP LK+ + + G +A V G L +G+ L+T PFAF+
Sbjct: 617 GRQLAEIARQLRPELKV----LFITG-YAEHAAVRGGFLDTGMQLITKPFAFD 664
>UniRef50_A7ET80 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 752
Score = 33.9 bits (74), Expect = 4.3
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = -3
Query: 585 KNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLK 454
K R LK SF P + + ASS GRP K +R+R LK
Sbjct: 128 KEDHNREEELKAMVSFMPHRPAVDASSSGRPMKKDSKRMRNGLK 171
>UniRef50_Q6IMG0 Cluster: GRP21; n=11; Eukaryota|Rep: GRP21 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 1193
Score = 33.5 bits (73), Expect = 5.7
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = -1
Query: 305 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLS--SAKP 132
S P S+ + +S I+ +S S S + ++ P+ K ++ S S+KP
Sbjct: 1048 STKPKSKPSSKPTSKPSSKPISKPSTKSTSKPSSKSTSKPSTKPKSKPSSKPTSKPSSKP 1107
Query: 131 IRRQSTRL*SKPSEPDPTRRCSADTSKRPS 42
I + ST+ SKPS PT + S ++ +PS
Sbjct: 1108 ISKPSTKSTSKPSS-KPTSKPSTVSASKPS 1136
>UniRef50_A0JCX9 Cluster: Putative uncharacterized protein; n=1;
Glyptapanteles indiensis|Rep: Putative uncharacterized
protein - Glyptapanteles indiensis
Length = 1065
Score = 33.5 bits (73), Expect = 5.7
Identities = 24/83 (28%), Positives = 44/83 (53%)
Frame = -1
Query: 290 EFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTR 111
++ S N ++I S + N QSN++ + T++P K+N+ H S+ P+ Q++
Sbjct: 523 QYMSINQNSFKQDLLIGSPE-NNIYNHQSNSRTIRTTIPSMKQNSTHPSN--PM-HQTSE 578
Query: 110 L*SKPSEPDPTRRCSADTSKRPS 42
L S+ + P ++ S S RPS
Sbjct: 579 L-SQQRQSQPNQQDSQQHSHRPS 600
>UniRef50_Q5KML3 Cluster: VpsB, putative; n=2; Basidiomycota|Rep:
VpsB, putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 686
Score = 33.5 bits (73), Expect = 5.7
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 386 RIPTSTTLLPACLPARRMQTVPIFRLGRILRTCLLNGRPPDEARI 520
R+P+ L A L A R Q P ++ +++ T + NG PP+ AR+
Sbjct: 397 RVPSPNKLRLAILYALRYQKSPSAQIPQVVSTLISNGVPPERARL 441
>UniRef50_Q2HF67 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 240
Score = 33.5 bits (73), Expect = 5.7
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = -1
Query: 278 ATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTRL*S- 102
A + T ++ SRR S V S R+ S+P + RN +P ++Q T S
Sbjct: 20 APTRTSATLSLLCSRRHLPVS-VASTTTRLAHSIP-RPRNGSPFGQKQPQQQQQTITPSP 77
Query: 101 KPSEPDPTRRCSADTSKRP 45
PSEP PT +A +S +P
Sbjct: 78 SPSEPSPTAPATATSSPQP 96
>UniRef50_A7E738 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 331
Score = 33.5 bits (73), Expect = 5.7
Identities = 29/89 (32%), Positives = 42/89 (47%)
Frame = -1
Query: 302 APPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRR 123
AP S+TS+ QN S +SR ++++S+ S AKR K T SS+ P +R
Sbjct: 15 APSSTNGSSTSSAQNASGT-SSRTVKTSSS--SPAKRGDVKESSKPSRTVTASSSSPAKR 71
Query: 122 QSTRL*SKPSEPDPTRRCSADTSKRPSDS 36
SKPS T+ S+ S D+
Sbjct: 72 DDVNESSKPSR---TKAASSSNSAGGGDN 97
>UniRef50_Q66GS5 Cluster: At1g78120; n=2; Arabidopsis thaliana|Rep:
At1g78120 - Arabidopsis thaliana (Mouse-ear cress)
Length = 530
Score = 33.1 bits (72), Expect = 7.5
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = -1
Query: 227 RSASNVQSNAKRVMTS---LPQKKRNTFHLSSAKPIRRQSTRL*SKPSEPDPTRRCSADT 57
R+ N+ S + +T+ LP+K +T S++P + S + KP + R S+++
Sbjct: 41 RAKDNLSSKSSTTVTNPKILPRKSTDT----SSQPKKSDSQKPQQKPKPDENHPRKSSES 96
Query: 56 SKRPSDSARANIPIG 12
+++ SDSAR +I G
Sbjct: 97 ARKSSDSARKSISSG 111
>UniRef50_Q5QLZ3 Cluster: Gastric mucin-like protein; n=4; Oryza
sativa|Rep: Gastric mucin-like protein - Oryza sativa
subsp. japonica (Rice)
Length = 579
Score = 33.1 bits (72), Expect = 7.5
Identities = 25/84 (29%), Positives = 40/84 (47%)
Frame = -1
Query: 293 PEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQST 114
P ++ S S +I+S S N ++ + P K+ +T LSS+KP S
Sbjct: 73 PARSNSVSRPSIQSTLISSNNRSSVVNASISSVCSPPTTPSKRTST--LSSSKPSVPASR 130
Query: 113 RL*SKPSEPDPTRRCSADTSKRPS 42
++ ++PS P TR C+ RPS
Sbjct: 131 QVPTRPSTPTKTRPCT-PVKPRPS 153
>UniRef50_Q7NID4 Cluster: Gll2249 protein; n=8; Cyanobacteria|Rep:
Gll2249 protein - Gloeobacter violaceus
Length = 544
Score = 32.7 bits (71), Expect = 9.9
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -3
Query: 411 KRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDD 244
+ +V G + GL+L F S PL Q + +G +T +G LP+HFNDD
Sbjct: 41 QEIVTCGQVLKGLIL--NGLGFVSAPLYLFEQ-FFVGKATEHLIGPGVLPEHFNDD 93
>UniRef50_A1WYA8 Cluster: TonB-dependent receptor precursor; n=2;
Halorhodospira halophila SL1|Rep: TonB-dependent
receptor precursor - Halorhodospira halophila (strain
DSM 244 / SL1) (Ectothiorhodospirahalophila (strain DSM
244 / SL1))
Length = 693
Score = 32.7 bits (71), Expect = 9.9
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = -3
Query: 195 EGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGY-LKAAFGLRSSQYP 19
E DD + T + +P ++R D ++ + RPD LRGY L+AA+G+ Y
Sbjct: 504 ERDDPWGTPHQHNLPPDRRHDAFWDEDAPLVGGVRNRPDPVRLRGYELRAAWGV--GPYD 561
Query: 18 HRLRF 4
RL F
Sbjct: 562 ARLSF 566
>UniRef50_Q0J1B9 Cluster: Os09g0451700 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Os09g0451700 protein -
Oryza sativa subsp. japonica (Rice)
Length = 180
Score = 32.7 bits (71), Expect = 9.9
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -1
Query: 104 SKPSEPDPTRRCSADTSKRPS 42
++ S P+PTR CSA+ SKRPS
Sbjct: 13 TRSSPPNPTRTCSAEHSKRPS 33
>UniRef50_Q55S59 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 986
Score = 32.7 bits (71), Expect = 9.9
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = -1
Query: 230 IRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTRL*SKPSEPDPTRRCSADTSK 51
+RS+S ++ + +RV+ S+ F +A P+R S+ KP E P +S
Sbjct: 563 LRSSSAIRKHRRRVIESVSDDDDPRFTTDTALPLREPSSNFIRKPQETAPLPSPPPTSSV 622
Query: 50 RPSDSARANI 21
PS A++
Sbjct: 623 APSSPPIASL 632
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 782,261,483
Number of Sequences: 1657284
Number of extensions: 16086591
Number of successful extensions: 48999
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 46576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48901
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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