Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30972
(449 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF217994-1|AAG17236.1| 353|Homo sapiens unknown protein. 33 0.34
L46721-1|AAC41774.1| 164|Homo sapiens mucin protein. 31 2.4
X15218-1|CAA33288.1| 728|Homo sapiens protein ( Human ski oncog... 30 4.2
AY334557-1|AAP97864.1| 168|Homo sapiens ski oncoprotein protein. 30 4.2
AL590822-8|CAI12482.1| 728|Homo sapiens v-ski sarcoma viral onc... 30 4.2
Z34281-1|CAA84035.1| 62|Homo sapiens mucin protein. 29 9.7
Z34277-1|CAA84031.1| 477|Homo sapiens mucin protein. 29 9.7
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 29 9.7
AJ292079-1|CAC44892.1| 67|Homo sapiens MUC5AC protein protein. 29 9.7
>AF217994-1|AAG17236.1| 353|Homo sapiens unknown protein.
Length = 353
Score = 33.5 bits (73), Expect = 0.34
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +2
Query: 386 RKKKKKNSRGGPVPNS 433
+KKKKKNSRGGPVP +
Sbjct: 45 KKKKKKNSRGGPVPGN 60
>L46721-1|AAC41774.1| 164|Homo sapiens mucin protein.
Length = 164
Score = 30.7 bits (66), Expect = 2.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 147 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPT 278
P TT+ T T + P S T AP T + ++ TLAPT
Sbjct: 41 PVPTTSTTSAPTTSTTSAPTTSTTSAPTTSTPSAPTTSTTLAPT 84
>X15218-1|CAA33288.1| 728|Homo sapiens protein ( Human ski oncogene
mRNA. ).
Length = 728
Score = 29.9 bits (64), Expect = 4.2
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 147 PKATTTCTRPRTR-FSLKKPARSRTLAPKTKASRSRDS 257
P+ TCT+PR R ++ P TLAP +DS
Sbjct: 443 PEPLATCTQPRKRKLTVDTPGAPETLAPVAAPEEDKDS 480
>AY334557-1|AAP97864.1| 168|Homo sapiens ski oncoprotein protein.
Length = 168
Score = 29.9 bits (64), Expect = 4.2
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 147 PKATTTCTRPRTR-FSLKKPARSRTLAPKTKASRSRDS 257
P+ TCT+PR R ++ P TLAP +DS
Sbjct: 120 PEPLATCTQPRKRKLTVDTPGAPETLAPVAAPEEDKDS 157
>AL590822-8|CAI12482.1| 728|Homo sapiens v-ski sarcoma viral
oncogene homolog (avian) protein.
Length = 728
Score = 29.9 bits (64), Expect = 4.2
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 147 PKATTTCTRPRTR-FSLKKPARSRTLAPKTKASRSRDS 257
P+ TCT+PR R ++ P TLAP +DS
Sbjct: 443 PEPLATCTQPRKRKLTVDTPGAPETLAPVAAPEEDKDS 480
>Z34281-1|CAA84035.1| 62|Homo sapiens mucin protein.
Length = 62
Score = 28.7 bits (61), Expect = 9.7
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 156 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPT 278
TT+ T T + P S T P+T S + S+ T APT
Sbjct: 12 TTSTTSAPTTSTTSAPTTSTTSTPQTSISSAPTSSTTSAPT 52
>Z34277-1|CAA84031.1| 477|Homo sapiens mucin protein.
Length = 477
Score = 28.7 bits (61), Expect = 9.7
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 156 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPT 278
TT+ T T + P S T P+T S + S+ T APT
Sbjct: 179 TTSTTSAPTTSTTSAPTTSTTSTPQTSISSAPTSSTTSAPT 219
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 28.7 bits (61), Expect = 9.7
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 156 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPT 278
TT+ T T + P S T P+T S + S+ T APT
Sbjct: 355 TTSTTSAPTTSTTSAPTTSTTSTPQTSISSAPTSSTTSAPT 395
Score = 28.7 bits (61), Expect = 9.7
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 156 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPT 278
TT+ T T + P S T P+T S + S+ T APT
Sbjct: 669 TTSTTSAPTTSTTSAPTTSTTSTPQTTTSSAPTSSTTSAPT 709
Score = 28.7 bits (61), Expect = 9.7
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 156 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPT 278
TT+ T T + P S T P+T S + S+ T APT
Sbjct: 804 TTSTTSAPTTSTTSAPTTSTTSTPQTSISSAPTSSTTSAPT 844
Score = 28.7 bits (61), Expect = 9.7
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 144 LPKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPT 278
+P +T + T T + P S T AP + + ++ TLAPT
Sbjct: 1090 IPASTPSTTSAPTTSTTSAPTTSTTSAPTHRTTSGPTTSTTLAPT 1134
>AJ292079-1|CAC44892.1| 67|Homo sapiens MUC5AC protein protein.
Length = 67
Score = 28.7 bits (61), Expect = 9.7
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 156 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPT 278
TT+ T T + P S T P+T S + S+ T APT
Sbjct: 16 TTSTTSAPTTSTTSAPTTSTTSTPQTTTSSAPTSSTTSAPT 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,457,165
Number of Sequences: 237096
Number of extensions: 1025681
Number of successful extensions: 6376
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6362
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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