Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30970
(839 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97013-4|AAB52339.1| 968|Caenorhabditis elegans Alanyl trna syn... 62 4e-10
Z66521-16|CAA91396.2| 793|Caenorhabditis elegans Hypothetical p... 53 3e-07
AF188715-1|AAF05590.1| 793|Caenorhabditis elegans alanyl-tRNA s... 53 3e-07
Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z68221-6|CAB97237.1| 583|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z68217-12|CAA92468.2| 583|Caenorhabditis elegans Hypothetical p... 29 3.1
AL032658-4|CAA21746.1| 283|Caenorhabditis elegans Hypothetical ... 29 4.1
Z81119-1|CAB03331.1| 363|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical pr... 28 7.2
U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical pr... 28 7.2
U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z68333-3|CAA92726.2| 1694|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z54284-4|CAA91061.1| 1001|Caenorhabditis elegans Hypothetical pr... 28 9.5
U41538-5|AAG00012.2| 762|Caenorhabditis elegans Hypothetical pr... 28 9.5
AY726541-1|AAU25950.1| 1694|Caenorhabditis elegans GTL-1 protein. 28 9.5
AJ276019-1|CAC81667.1| 1681|Caenorhabditis elegans putative TRP ... 28 9.5
AF045642-3|AAC02581.1| 588|Caenorhabditis elegans Hypothetical ... 28 9.5
>U97013-4|AAB52339.1| 968|Caenorhabditis elegans Alanyl trna
synthetase protein 2 protein.
Length = 968
Score = 62.5 bits (145), Expect = 4e-10
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
Frame = +2
Query: 281 FKETVSKL--NTSIIPGELIFKLYDTHGLQEELINRIAELNNMTTDKEGFQKLLSKHKHR 454
F+ V L T PG++ ++LYDT+G +L +AE ++ D F++ ++ K
Sbjct: 393 FQRAVQSLPEGTMTFPGDVSWRLYDTYGFPADLTQLMAEEKGLSVDNTAFEE--ARRKAI 450
Query: 455 HKTAFKEQALNKTI-LFNDAIDRLIKNGISRTNDNFKYNYEIT----DSKLELGTLTTKL 619
++ T+ L A+ L + G+ T+D+ KY Y T D+ + K+
Sbjct: 451 ETSSAGTGKFRDTLDLDVHALAELQQKGVPTTDDSPKYAYTFTGEGSDAVYKFEPCVGKI 510
Query: 620 CAILNEDCQWIDVLDTIENRPYYLVTEDTNFYCEEGGQISDSGV 751
AI D +++D L E ++ + TNFY E+GGQI D GV
Sbjct: 511 LAI-RRDGKFVDQLAAGEEGA--ILLDRTNFYAEQGGQIYDVGV 551
>Z66521-16|CAA91396.2| 793|Caenorhabditis elegans Hypothetical
protein W02B12.6a protein.
Length = 793
Score = 52.8 bits (121), Expect = 3e-07
Identities = 47/176 (26%), Positives = 75/176 (42%)
Frame = +2
Query: 275 KEFKETVSKLNTSIIPGELIFKLYDTHGLQEELINRIAELNNMTTDKEGFQKLLSKHKHR 454
K F ++ + II G F L++THGL + +A D+ F++
Sbjct: 396 KMFDSVAAESKSPIISGRKAFNLFETHGLPLAVTVELARNIGREVDETEFERC---RLEA 452
Query: 455 HKTAFKEQALNKTILFNDAIDRLIKNGISRTNDNFKYNYEITDSKLELGTLTTKLCAILN 634
K + K I +D +D KY+Y + K E + T++ +
Sbjct: 453 QKVSQKASQFKLPISADD---------FPSHSDKEKYSYVFRNGKYEFPQVKTRILQVY- 502
Query: 635 EDCQWIDVLDTIENRPYYLVTEDTNFYCEEGGQISDSGVARIDEHLSF*VDSGFKI 802
+D Q + L+ N +LV E+ FY E+GGQ SD+G ID F V++ KI
Sbjct: 503 KDQQKAESLEA--NDRGFLVLEECQFYGEQGGQTSDTGHLLIDGREVFEVENAKKI 556
>AF188715-1|AAF05590.1| 793|Caenorhabditis elegans alanyl-tRNA
synthetase protein.
Length = 793
Score = 52.8 bits (121), Expect = 3e-07
Identities = 47/176 (26%), Positives = 75/176 (42%)
Frame = +2
Query: 275 KEFKETVSKLNTSIIPGELIFKLYDTHGLQEELINRIAELNNMTTDKEGFQKLLSKHKHR 454
K F ++ + II G F L++THGL + +A D+ F++
Sbjct: 396 KMFDSVAAESKSPIISGRKAFNLFETHGLPLAVTVELARNIGREVDETEFERC---RLEA 452
Query: 455 HKTAFKEQALNKTILFNDAIDRLIKNGISRTNDNFKYNYEITDSKLELGTLTTKLCAILN 634
K + K I +D +D KY+Y + K E + T++ +
Sbjct: 453 QKVSQKASQFKLPISADD---------FPSHSDKEKYSYVFRNGKYEFPQVKTRILQVY- 502
Query: 635 EDCQWIDVLDTIENRPYYLVTEDTNFYCEEGGQISDSGVARIDEHLSF*VDSGFKI 802
+D Q + L+ N +LV E+ FY E+GGQ SD+G ID F V++ KI
Sbjct: 503 KDQQKAESLEA--NDRGFLVLEECQFYGEQGGQTSDTGHLLIDGREVFEVENAKKI 556
>Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical protein
C44H9.4 protein.
Length = 1099
Score = 31.5 bits (68), Expect = 0.77
Identities = 23/83 (27%), Positives = 34/83 (40%)
Frame = +2
Query: 20 KICSDVFNNPHLLSNLYDEVAATLSSTYPELVSNKSSAKLIIEHEAQAYAKMRAGLAKKW 199
KI SD+F N L+S + P++ N S L++ HE Y +
Sbjct: 831 KILSDLFYNGQLISGVEKNQRDEFMRMRPDIWPNSSFPILVLNHEKDGYRMGTSVANNSE 890
Query: 200 KDLVTRYPEVESLNDVETPGFAL 268
KD V R + SL + G+ L
Sbjct: 891 KDQVVR---IVSLLTKKVKGYGL 910
>Z68221-6|CAB97237.1| 583|Caenorhabditis elegans Hypothetical
protein F58G6.6 protein.
Length = 583
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 398 NMTTDKEGFQKLLSKHKHRHKTAFKEQALNKT 493
NMT D Q ++++HR K K+Q +KT
Sbjct: 88 NMTVDSISIQSSFAEYQHRRKERLKKQEAHKT 119
>Z68217-12|CAA92468.2| 583|Caenorhabditis elegans Hypothetical
protein F58G6.6 protein.
Length = 583
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 398 NMTTDKEGFQKLLSKHKHRHKTAFKEQALNKT 493
NMT D Q ++++HR K K+Q +KT
Sbjct: 88 NMTVDSISIQSSFAEYQHRRKERLKKQEAHKT 119
>AL032658-4|CAA21746.1| 283|Caenorhabditis elegans Hypothetical
protein Y76A2B.5 protein.
Length = 283
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Frame = +2
Query: 617 LCAILNEDCQWIDVLDTIENRPY------YLVTEDTNFYCEEGGQISDSGVARIDEH 769
+C+ L+ W D +D RPY + + E + Y + G +I D G ++ +H
Sbjct: 191 ICSTLHRFGYWADFIDPSSGRPYMGDYTNHTLFETNDAYKQMGFKIEDLGCCKVLQH 247
>Z81119-1|CAB03331.1| 363|Caenorhabditis elegans Hypothetical
protein T10H4.2 protein.
Length = 363
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +2
Query: 671 ENRPYYLVTEDTNFYCEEGGQISDSGVARIDEHLSF*VDSGFKIRDFVFPKGCFL 835
EN+ Y L E YC E + S G EH +DS +IR+ +F FL
Sbjct: 161 ENKDYELKLEFEEAYCLEPDEYSYVGPQYFYEHRKI-IDSNEEIREKIFHLPSFL 214
>Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical
protein F21G4.6 protein.
Length = 1885
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = +3
Query: 666 QSKIDLIIW*QKTRISIARRVVRYQTLVLQESTNIYH----FKSIVVLKF 803
Q ID+I + T ++++ +++ LVLQ T IY+ FKS+ ++
Sbjct: 328 QLMIDVICYSTSTDDQLSQQAIKFMFLVLQRGTEIYNGLDLFKSVKKFRY 377
>U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical
protein F56C9.10b protein.
Length = 1031
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Frame = -3
Query: 153 SCSIISFA---LDLLLTSSG*VELKVAATSSYKF 61
SC ++++A LDL L SSG + +V ATSS K+
Sbjct: 392 SCQLLAYADTSLDLNLQSSGGLAAEVEATSSEKY 425
>U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical
protein F56C9.10a protein.
Length = 1028
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Frame = -3
Query: 153 SCSIISFA---LDLLLTSSG*VELKVAATSSYKF 61
SC ++++A LDL L SSG + +V ATSS K+
Sbjct: 389 SCQLLAYADTSLDLNLQSSGGLAAEVEATSSEKY 422
>Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical
protein C27H6.2 protein.
Length = 458
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/45 (24%), Positives = 24/45 (53%)
Frame = +2
Query: 353 HGLQEELINRIAELNNMTTDKEGFQKLLSKHKHRHKTAFKEQALN 487
HG+ E+++R+ + M ++E +K+L F+E+A +
Sbjct: 366 HGIPPEMLDRLMIIPTMKYNEEDIRKILVHRTEAENVQFEEKAFD 410
>Z68333-3|CAA92726.2| 1694|Caenorhabditis elegans Hypothetical protein
C05C12.3 protein.
Length = 1694
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = -1
Query: 680 VYFRLY---LKRQSIDSPHSKWHIILLSKFQVQVY 585
V+ LY L RQSI P+ WH IL+ +Q Y
Sbjct: 1226 VFITLYAFGLLRQSITYPYEDWHWILVRNIFLQPY 1260
>Z54284-4|CAA91061.1| 1001|Caenorhabditis elegans Hypothetical
protein D2085.4 protein.
Length = 1001
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +2
Query: 302 LNTSIIPGELIFKLYDTHGLQEELINRIAELNNMTTDKEGFQKLLSKHKH----RHKTAF 469
L +I +L+ Y+T+ +E L+ ++EL + T + F+K + + + R F
Sbjct: 66 LEETIKMAQLLVNFYETNKDEERLVMTLSELVKLKTSDKEFEKRIRETQRLLLARCCIKF 125
Query: 470 KEQALNKTILFN 505
+ A TI F+
Sbjct: 126 LKNATENTIFFH 137
>U41538-5|AAG00012.2| 762|Caenorhabditis elegans Hypothetical
protein R04E5.2 protein.
Length = 762
Score = 27.9 bits (59), Expect = 9.5
Identities = 22/74 (29%), Positives = 35/74 (47%)
Frame = +2
Query: 539 SRTNDNFKYNYEITDSKLELGTLTTKLCAILNEDCQWIDVLDTIENRPYYLVTEDTNFYC 718
SR + K N E ++L TL + A+ DV+ I++ ++++ED
Sbjct: 304 SRMVEMLKMNMENDACDIDLSTLKIAIGAMELTKKSVRDVMTDIDD--VFMLSEDQVLNA 361
Query: 719 EEGGQISDSGVARI 760
E +ISDSG RI
Sbjct: 362 ETMTKISDSGYTRI 375
>AY726541-1|AAU25950.1| 1694|Caenorhabditis elegans GTL-1 protein.
Length = 1694
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = -1
Query: 680 VYFRLY---LKRQSIDSPHSKWHIILLSKFQVQVY 585
V+ LY L RQSI P+ WH IL+ +Q Y
Sbjct: 1226 VFITLYAFGLLRQSITYPYEDWHWILVRNIFLQPY 1260
>AJ276019-1|CAC81667.1| 1681|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1681
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = -1
Query: 680 VYFRLY---LKRQSIDSPHSKWHIILLSKFQVQVY 585
V+ LY L RQSI P+ WH IL+ +Q Y
Sbjct: 1213 VFITLYAFGLLRQSITYPYEDWHWILVRNIFLQPY 1247
>AF045642-3|AAC02581.1| 588|Caenorhabditis elegans Hypothetical
protein C17H12.2 protein.
Length = 588
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +2
Query: 650 IDV-LDTIENRPYYLVTEDTNFYCEEGGQISDSGVA 754
+D+ LDT ENRPY++V+ + + +GG + DS V+
Sbjct: 444 VDIKLDT-ENRPYFMVSSSSQLFVCDGGCL-DSPVS 477
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,669,983
Number of Sequences: 27780
Number of extensions: 356440
Number of successful extensions: 1151
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -