Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30968
         (800 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.1  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   3.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.0  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +2

Query: 626  KRRNSPWKRKTKRKSLTGRRASRGDQKVKEEEVE 727
            K++    KRK K+KSL G   S G     E  +E
Sbjct: 1077 KKQAEEAKRKAKQKSLLGFLQSGGTSDDDEGSIE 1110


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +2

Query: 626  KRRNSPWKRKTKRKSLTGRRASRGDQKVKEEEVE 727
            K++    KRK K+KSL G   S G     E  +E
Sbjct: 1077 KKQAEEAKRKAKQKSLLGFLQSGGTSDDDEGSIE 1110


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +2

Query: 626  KRRNSPWKRKTKRKSLTGRRASRGDQKVKEEEVE 727
            K++    KRK K+KSL G   S G     E  +E
Sbjct: 1077 KKQAEEAKRKAKQKSLLGFLQSGGTSDDDEGSIE 1110


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +2

Query: 626  KRRNSPWKRKTKRKSLTGRRASRGDQKVKEEEVE 727
            K++    KRK K+KSL G   S G     E  +E
Sbjct: 1077 KKQAEEAKRKAKQKSLLGFLQSGGTSDDDEGSIE 1110


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 15/52 (28%), Positives = 28/52 (53%)
 Frame = +1

Query: 526 KPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWS 681
           KP ++ V + E++  K + K  +       K +K+K +T +EE  + KP W+
Sbjct: 244 KPKIEDVGEDEDEDTKKEDKKKK-------KTIKEK-YTEDEELNKTKPIWT 287


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 400 DYHERIARLEDEKFDLEYIVKR 465
           DYH    R     F +EY+V R
Sbjct: 835 DYHGAWERQTGHNFTMEYLVSR 856



 Score = 21.8 bits (44), Expect = 6.5
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = +2

Query: 632  RNSPWKRKTKRKSLTGRRASRGDQKVKEEEVEA*TS*YPIIKT 760
            RN  W         TG  A  GDQ V  E++++       IKT
Sbjct: 914  RNQRWIVNRDTSGATGPFAYHGDQWVGFEDIKSVRDKAEYIKT 956


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,224
Number of Sequences: 336
Number of extensions: 2420
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)