Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30968
(800 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 37 0.018
At3g29075.1 68416.m03637 glycine-rich protein 35 0.055
At4g02640.2 68417.m00359 bZIP transcription factor family protei... 34 0.13
At4g02640.1 68417.m00358 bZIP transcription factor family protei... 34 0.13
At5g41780.1 68418.m05087 myosin heavy chain-related weak similar... 33 0.22
At4g01780.1 68417.m00233 XH/XS domain-containing protein contain... 31 0.67
At3g28770.1 68416.m03591 expressed protein 31 0.67
At1g56660.1 68414.m06516 expressed protein 31 0.89
At5g57830.1 68418.m07232 expressed protein contains Pfam profile... 31 1.2
At3g26050.1 68416.m03244 expressed protein 30 1.6
At3g04960.1 68416.m00538 expressed protein low similarity to SP|... 30 1.6
At2g22795.1 68415.m02704 expressed protein 30 2.1
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 30 2.1
At4g02250.1 68417.m00304 invertase/pectin methylesterase inhibit... 29 2.7
At3g05110.1 68416.m00555 hypothetical protein 29 2.7
At5g65180.2 68418.m08199 expressed protein contains Pfam domain,... 29 4.7
At5g65180.1 68418.m08198 expressed protein contains Pfam domain,... 29 4.7
At4g19550.1 68417.m02875 expressed protein 29 4.7
At4g15490.1 68417.m02367 UDP-glucoronosyl/UDP-glucosyl transfera... 29 4.7
At1g47900.1 68414.m05334 expressed protein 29 4.7
At5g57970.1 68418.m07253 methyladenine glycosylase family protei... 28 6.3
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 28 6.3
At1g80070.1 68414.m09373 splicing factor, putative strong simila... 28 6.3
At5g63640.1 68418.m07990 VHS domain-containing protein / GAT dom... 28 8.3
At2g41170.1 68415.m05085 F-box family protein contains Pfam PF00... 28 8.3
At2g34730.1 68415.m04265 myosin heavy chain-related low similari... 28 8.3
At1g77550.1 68414.m09030 tubulin-tyrosine ligase family protein ... 28 8.3
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 36.7 bits (81), Expect = 0.018
Identities = 22/90 (24%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Frame = +1
Query: 409 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKA 588
+++A L+ ++ +LE +++K EIS+ SQ+ +L+ + + KV +E+ ++ +
Sbjct: 879 QQVASLDSQRAELEIQLEKKSEEISEYLSQITNLKEEII----NKVKVHESILEEINGLS 934
Query: 589 AEFNFRN-QLKVVKKKEFTLEEEDKEKKPD 675
+ R +L+ + K+ L+EE + KK +
Sbjct: 935 EKIKGRELELETLGKQRSELDEELRTKKEE 964
>At3g29075.1 68416.m03637 glycine-rich protein
Length = 294
Score = 35.1 bits (77), Expect = 0.055
Identities = 27/107 (25%), Positives = 56/107 (52%)
Frame = +1
Query: 361 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLK 540
DD ++ K KDY + DEK + K+KD + NS+ ++ + K K K
Sbjct: 140 DDGDDGHKKHSGKDYDDG-----DEKSKKKEKEKKKDKKKDGNNSEDDEFKKKKKKEQYK 194
Query: 541 KVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWS 681
+ ++ + + +KK ++N ++ K KKK + ++++K+KK +++
Sbjct: 195 EHHD-DDDYDEKKKKKKDYNDDDEKK--KKKHYNDDDDEKKKKHNYN 238
>At4g02640.2 68417.m00359 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 417
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +1
Query: 352 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKP 531
+++D+ NE T +D ++ R+ + +RK + SDL +QVNDL+G+
Sbjct: 205 EDLDEENETTGSLKPEDV-KKSRRMLSNRESARRSRRRKQEQTSDLETQVNDLKGEH-SS 262
Query: 532 TLKKVSKYENKF 567
LK++S +K+
Sbjct: 263 LLKQLSNMNHKY 274
>At4g02640.1 68417.m00358 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 411
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +1
Query: 352 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKP 531
+++D+ NE T +D ++ R+ + +RK + SDL +QVNDL+G+
Sbjct: 199 EDLDEENETTGSLKPEDV-KKSRRMLSNRESARRSRRRKQEQTSDLETQVNDLKGEH-SS 256
Query: 532 TLKKVSKYENKF 567
LK++S +K+
Sbjct: 257 LLKQLSNMNHKY 268
>At5g41780.1 68418.m05087 myosin heavy chain-related weak similarity
to M protein, serotype 5 precursor (SP:P02977)
{Streptococcus pyogenes} and to Myosin heavy chain,
non-muscle (SP:Q99323) (Zipper protein) (Myosin II)
{Drosophila melanogaster}
Length = 537
Score = 33.1 bits (72), Expect = 0.22
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Frame = +1
Query: 352 KNIDDANEDTIKRVCKDY--HERIA---RLEDEKFDLEYIVKRKDMEISDLNSQVNDLRG 516
K + NE+ ++ ++ H +IA +ED+ LEY VK ++ I L+ ++ D
Sbjct: 228 KKRKEFNEEMKSKITENQKLHTKIAVIDEIEDKSKKLEYQVKEQEDIIQRLSMEIKD--- 284
Query: 517 KFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQL--KVVKKKEFTLEEEDKEKKPD 675
K LK+ +KF++ QK ++F ++L +++KK L E+ + K D
Sbjct: 285 --QKKLLKEQKDAIDKFSEDQKLMKRWSFGSKLNTNLLEKKMEELAEDFRMKMED 337
>At4g01780.1 68417.m00233 XH/XS domain-containing protein contains
Pfam profiles PF03469: XH domain, PF03468: XS domain
Length = 456
Score = 31.5 bits (68), Expect = 0.67
Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Frame = +1
Query: 370 NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVS 549
+ED +R ++ HE+I RLE + ++ I ++E+ L Q+N ++ + V
Sbjct: 219 SEDLEQRQKEELHEKIIRLERQIDQVQAI----ELEVEQLKGQLNVMKHMASDGDAQVVK 274
Query: 550 KYENKFAKLQKKAAE---FNFRNQLKVVKKKEFTLEEEDKEKK 669
+ + F L +K AE N NQ +++++ E ++ K+
Sbjct: 275 EVDIIFKDLVEKEAELADLNKFNQTLILRERRTNDELQEARKE 317
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 31.5 bits (68), Expect = 0.67
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Frame = +1
Query: 352 KNIDDANEDTIKRVCKDYHERIARLE-DEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVK 528
+N + ED ++ K H ++ + E D+K E K + EI SQ N++ K K
Sbjct: 1126 QNSNKKKEDKNEKK-KSQHVKLVKKESDKKEKKENEEKSETKEIESSKSQKNEVDKKEKK 1184
Query: 529 PTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKK 669
+ + K E + + ++K + N + +KK+ ++EE K+K+
Sbjct: 1185 SSKDQQKKKEKEMKESEEKKLKKNEED-----RKKQTSVEENKKQKE 1226
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 31.1 bits (67), Expect = 0.89
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 7/117 (5%)
Frame = +1
Query: 346 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFV 525
K + +++ E K+ K+ E +++K D E +K ++S ++ + GK
Sbjct: 122 KHEELEEEKEGKKKKNKKEKDESGPEEKNKKADKE----KKHEDVSQEKEELEEEDGKKN 177
Query: 526 KPTLKKVSKYENKFAK--LQKKAAEFNFRNQLKVVK-KKEF----TLEEEDKEKKPD 675
K K S E K K +KK E + N+ K VK KKE LE+ED+EKK +
Sbjct: 178 KKKEKDESGTEEKKKKPKKEKKQKEESKSNEDKKVKGKKEKGEKGDLEKEDEEKKKE 234
>At5g57830.1 68418.m07232 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 387
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +1
Query: 409 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKA 588
E++ E E ++ +K+MEI+ L QV R K + + ENKF + +
Sbjct: 78 EKMCHAETSLVLFEDLIYQKEMEIASLEFQVQAYRCKLLSLGCSDPAVIENKFPETLIFS 137
Query: 589 AEFNFRNQLKVVKK 630
E + NQ + +K+
Sbjct: 138 GENSRGNQKRKMKR 151
>At3g26050.1 68416.m03244 expressed protein
Length = 533
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/71 (25%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +1
Query: 460 KRKDMEI-SDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKE 636
KRK++ + S ++ ++++ + + +S + AK ++ F FR+ + K+KE
Sbjct: 355 KRKNISVRSSVSCRISNNEQRKPSVGCENLSTHSRTKAKSLTVSSPFVFRSDERAEKRKE 414
Query: 637 FTLEEEDKEKK 669
F + E+K KK
Sbjct: 415 FFKKVEEKNKK 425
>At3g04960.1 68416.m00538 expressed protein low similarity to
SP|P32380 NUF1 protein (Spindle poly body spacer protein
SPC110) {Saccharomyces cerevisiae}
Length = 556
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/79 (29%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Frame = +1
Query: 442 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAE--FNFRNQL 615
DLE + +RK+ E+ ++ + D ++ +LK + +++F L+++A E + RNQ+
Sbjct: 6 DLEGLDQRKE-EMRNIFDDIQDKASLILQFSLKW-EEIDDRFGFLKQRAMEKEVSVRNQI 63
Query: 616 KVVKKKEFTLE-EEDKEKK 669
++KKE L E++E+K
Sbjct: 64 LELEKKEERLRLVEERERK 82
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/103 (23%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Frame = +1
Query: 364 DANEDT-IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLK 540
+ NED +++ + E EDE + E ++ E + ++ N+ + K
Sbjct: 483 EKNEDKETEKIESSFLEETKEKEDETKEKEESSSQEKTEEKETETKDNEESSSQEETKDK 542
Query: 541 KVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKK 669
+ K E + A Q+++ E N+ + +K+E + +EE KEK+
Sbjct: 543 ENEKIEKEEASSQEESKE----NETETKEKEESSSQEETKEKE 581
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = +1
Query: 415 IARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT---LKKVSKYENKFAKLQKK 585
++ L K L ++++KD EIS+ NS + K VK T +K ++ A+L +
Sbjct: 117 MSELHKSKRQLMELLEQKDAEISEKNSTIKSYLDKIVKLTDTSSEKEARLAEATAELARS 176
Query: 586 AAEFNFRNQLKVVKKKEFTLEEEDKEKKPD 675
A + +Q K + ++ +E+ K D
Sbjct: 177 QAMCSRLSQEKELTERHAKWLDEELTAKVD 206
>At4g02250.1 68417.m00304 invertase/pectin methylesterase inhibitor
family protein low similarity to SP|P83326
Pectinesterase inhibitor (Pectin methylesterase
inhibitor) (PMEI) {Actinidia chinensis}, pistil-specific
gene sts15 [Solanum tuberosum] GI:1616628; contains Pfam
profile PF04043: Plant invertase/pectin methylesterase
inhibitor
Length = 145
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 346 KPKNIDDANEDTIKRVCKDYHERIARLED 432
K KN++ A EDT+ K+Y + +A+L+D
Sbjct: 53 KQKNLEPALEDTLDDCSKNYLDAVAQLDD 81
>At3g05110.1 68416.m00555 hypothetical protein
Length = 372
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/76 (22%), Positives = 37/76 (48%)
Frame = +1
Query: 442 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKV 621
DLE I K E S+ + ++ +LK++ EN+ +++ K F+ + +
Sbjct: 35 DLEQIQKEDSSEEICTESERMRKETELIETSLKQLEARENELREVEAKRKFFDLKEKELE 94
Query: 622 VKKKEFTLEEEDKEKK 669
K+KE L++ +++
Sbjct: 95 EKEKELELKQRQVQER 110
>At5g65180.2 68418.m08199 expressed protein contains Pfam domain,
PF04818: Protein of unknown function, DUF618
Length = 311
Score = 28.7 bits (61), Expect = 4.7
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Frame = +1
Query: 361 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVK--RKDMEISDLNSQVNDLRGKFVKPT 534
+++NE+T CK RI ++E + D K RK+ +L + N LR K
Sbjct: 53 ENSNEETEMNKCKSAVRRIRKMEKDVEDACSTAKDPRKESLAKELEEEENILRQSVEK-- 110
Query: 535 LKKVSKYENKFAK-----LQKKAAEF-NFRNQLKVVKKKEFTLEEEDKEKK 669
LK V + L+++ +E N ++Q++V +E T E ++ +K+
Sbjct: 111 LKSVEESRTSLVNHLREALREQESELENLQSQIQVA--QEQTEEAQNMQKR 159
>At5g65180.1 68418.m08198 expressed protein contains Pfam domain,
PF04818: Protein of unknown function, DUF618
Length = 439
Score = 28.7 bits (61), Expect = 4.7
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Frame = +1
Query: 361 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVK--RKDMEISDLNSQVNDLRGKFVKPT 534
+++NE+T CK RI ++E + D K RK+ +L + N LR K
Sbjct: 181 ENSNEETEMNKCKSAVRRIRKMEKDVEDACSTAKDPRKESLAKELEEEENILRQSVEK-- 238
Query: 535 LKKVSKYENKFAK-----LQKKAAEF-NFRNQLKVVKKKEFTLEEEDKEKK 669
LK V + L+++ +E N ++Q++V +E T E ++ +K+
Sbjct: 239 LKSVEESRTSLVNHLREALREQESELENLQSQIQVA--QEQTEEAQNMQKR 287
>At4g19550.1 68417.m02875 expressed protein
Length = 212
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 7/56 (12%)
Frame = +1
Query: 535 LKKVSKYEN--KFAKLQKKAA-----EFNFRNQLKVVKKKEFTLEEEDKEKKPDWS 681
L K+ EN K AKL K E++ +N + + K +++ EEE++ ++PDW+
Sbjct: 119 LDKLFDPENSPKRAKLDKPVVVGDQIEYSKQNSEESLLKSQYSEEEEEEAEEPDWN 174
>At4g15490.1 68417.m02367 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase ;simalr to
UDP-glucose:sinapate glucosyltransferase GI:9794913 from
[Brassica napus]
Length = 479
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Frame = -2
Query: 748 WVL*CSCLNLFFFY---LLISPACPSTSQAFSL-CLPLPR--*IPSFSRPSIGY 605
WV C+CL +++Y L+ P + + CLPL + IPSF PS Y
Sbjct: 142 WVQSCACLTAYYYYHHRLVKFPTKTEPDISVEIPCLPLLKHDEIPSFLHPSSPY 195
>At1g47900.1 68414.m05334 expressed protein
Length = 1054
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/89 (24%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +1
Query: 397 KDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFV--KPTLKKVSKY-ENKF 567
KD+ E+I +++ + E V++ + ++ DLN +++ + V + +K+ SK E+
Sbjct: 88 KDFEEQIDAYDEKVHEYEEQVQKLNEDVEDLNEKLSVANEEIVTKEALVKQHSKVAEDAV 147
Query: 568 AKLQKKAAE-FNFRNQLKVVKKKEFTLEE 651
+ +K AE +N L+ V + T E+
Sbjct: 148 SGWEKADAEALALKNTLESVTLSKLTAED 176
>At5g57970.1 68418.m07253 methyladenine glycosylase family protein
similar to SP|P05100 DNA-3-methyladenine glycosylase I
(EC 3.2.2.20) (3-methyladenine-DNA glycosylase I,
constitutive) {Escherichia coli}; contains Pfam profile
PF03352: Methyladenine glycosylase
Length = 347
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +2
Query: 299 NVKLLKGGASSRRGAVNLRTLTTPTKILLRGFAKTTMNASLVLKMKNSIWNTSL 460
+++ L+ +S R G+ + TPT+ + K T+NA+ +L+ N++L
Sbjct: 40 SLRKLERSSSGRTGSDEKTSYATPTETVSSSSQKHTLNAASILRRHEQNLNSNL 93
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 356 TLTTPTKILLRGFAKTTMNASLVLKMKNSIWNTSLKGKIW 475
TLT TK+ G ++ + AS + + + S+WNTS W
Sbjct: 577 TLTPITKLCFAGKSEFLVAASHIPRPELSVWNTSKLSLSW 616
>At1g80070.1 68414.m09373 splicing factor, putative strong similarity
to splicing factor Prp8 [Homo sapiens] GI:3661610;
contains Pfam profile PF01398: Mov34/MPN/PAD-1 family
Length = 2382
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/70 (21%), Positives = 34/70 (48%)
Frame = +1
Query: 442 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKV 621
DL Y K+ D+ ++ S ++ + + + + +E++F Q+ AE+ + Q
Sbjct: 1386 DLRYS-KQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQ 1444
Query: 622 VKKKEFTLEE 651
+ + TLE+
Sbjct: 1445 AQNRRLTLED 1454
>At5g63640.1 68418.m07990 VHS domain-containing protein / GAT
domain-containing protein weak similarity to hepatocyte
growth factor-regulated tyrosine kinase substrate HRS
isoform 2 [Homo sapiens] GI:9022389; contains Pfam
profiles PF00790: VHS domain, PF03127: GAT domain
Length = 447
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 535 LKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPD 675
L+ V N K + KA+ N + + + LEEED+E++P+
Sbjct: 285 LEPVRPISNGDQKRELKASNANTESSSFISNRAHLKLEEEDEEEEPE 331
>At2g41170.1 68415.m05085 F-box family protein contains Pfam
PF00646: F-box domain; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 371
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/100 (20%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = +1
Query: 385 KRVCKDYHERIARLEDEKFDLEYIVKR-KDMEISDLNSQVNDLRGKFVKPTLKKVSKYEN 561
K+ ++ +++ L+ L+ I+++ E+ + S ++LR K V L + E
Sbjct: 47 KKKNQEDENKMSLLDLPDLTLDCILEKLSPSELCAMTSVCSELRDKCVSDHLWE-KHMET 105
Query: 562 KFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWS 681
K+ +L AA +++ + + + + ++ KP+WS
Sbjct: 106 KWGRLMGDAAIQEWKSHVATIMRCLTSSSSSSRKSKPNWS 145
>At2g34730.1 68415.m04265 myosin heavy chain-related low similarity
to SP|P14105 Myosin heavy chain, nonmuscle (Cellular
myosin heavy chain) {Gallus gallus}
Length = 825
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 457 VKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAE 594
+K ++SDL+ Q+N+++GK T K+ + E K L+K AE
Sbjct: 729 LKNMQSQLSDLSHQINEVKGK--ASTYKQ--RLEKKCCDLKKAEAE 770
>At1g77550.1 68414.m09030 tubulin-tyrosine ligase family protein
contains tubulin-tyrosine ligase family domain,
Pfam:PF03133
Length = 867
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 376 DTIKRVCKDYHERIARLEDEKFDLEYIV 459
+T ++C+ Y E A + KFDL Y+V
Sbjct: 674 ETGPKICQKYIEHPALFKGNKFDLRYVV 701
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,154,029
Number of Sequences: 28952
Number of extensions: 220490
Number of successful extensions: 846
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1814318400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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