Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30966
         (748 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L23648-6|AAA28032.2|  390|Caenorhabditis elegans Hypothetical pr...    85   7e-17
Z49207-8|CAJ85773.1|  455|Caenorhabditis elegans Hypothetical pr...    35   0.070
Z49207-7|CAA89072.1|  512|Caenorhabditis elegans Hypothetical pr...    35   0.070
AC006642-3|AAF39832.2|  410|Caenorhabditis elegans Acyltransfera...    33   0.16 
AC006642-2|AAF39831.1|  617|Caenorhabditis elegans Acyltransfera...    33   0.16 
Z29094-7|CAA82342.2|  453|Caenorhabditis elegans Hypothetical pr...    33   0.21 
Z78410-9|CAB01637.2|  304|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z50806-1|CAA90689.1|  179|Caenorhabditis elegans Hypothetical pr...    29   2.6  
U80838-7|AAC71112.3|  581|Caenorhabditis elegans Hypothetical pr...    28   8.1  
AF045642-10|AAC02587.1|  459|Caenorhabditis elegans Hypothetical...    28   8.1  
AF016433-10|AAB65387.1|  338|Caenorhabditis elegans Seven tm rec...    28   8.1  

>L23648-6|AAA28032.2|  390|Caenorhabditis elegans Hypothetical
           protein F44B9.5 protein.
          Length = 390

 Score = 84.6 bits (200), Expect = 7e-17
 Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 10/221 (4%)
 Frame = +3

Query: 111 LAAEKLINKERFNGENALQF-LLYLPIGVILMVIRIFLGVILWIASIILPNKWAVSHMLT 287
           L  E L +++R     A  F ++Y P+G+I+++IR+FLG   +I + +L    A+     
Sbjct: 15  LRIEDLFHQKRNEDTIAKIFSIIYAPVGLIILLIRVFLGFHTFIVACLLRKSAALRMHTL 74

Query: 288 TLACWTFGVYVKLKGQRDPRCSVLVANYVTCFDSLAAAHVFGTISLKRWKLPPFFASTLG 467
            + C   G+ V+  G RD    VL AN+V+  D LA   +   +    W +P       G
Sbjct: 75  RIMCSILGIVVEKSGHRDESARVLCANHVSILDHLAVDILTPCLLPSVWDIPSIIRWCFG 134

Query: 468 ------IKNASQF-SKKQHFSEVPTKPVLIQPESGPTNG-KAVLRFTDWPFQIKSNVQPV 623
                  +   Q  S+ +        P+L  PE   T+G KA+++F  W F++ S VQPV
Sbjct: 135 YVDLGATRGRDQLVSRAKQLLTREQMPLLAFPEGIITSGEKALIKFNTWCFEVSSVVQPV 194

Query: 624 AITVERAFT-RATVQRRQYSARFPWRDAAWFLLSPATVYTL 743
           ++ V R +  + +V     S    W D  +F   P TV T+
Sbjct: 195 SVRVWRPYPWKVSVSVLGSSW---WTDLFYFFALPFTVITV 232


>Z49207-8|CAJ85773.1|  455|Caenorhabditis elegans Hypothetical
           protein R07E3.5b protein.
          Length = 455

 Score = 34.7 bits (76), Expect = 0.070
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = +3

Query: 495 KQHFSEVPTKPVLIQPESGPTNGKAVLRFTDWPFQIKSNVQPVAITVERAFTRA 656
           ++H ++    P++I PE    N  +V+ F    F+I S + P+A+  +   T A
Sbjct: 245 REHVNDENKLPIIIFPEGTCINNTSVMMFKKGSFEIGSTIYPIAVKYDTRLTDA 298


>Z49207-7|CAA89072.1|  512|Caenorhabditis elegans Hypothetical
           protein R07E3.5a protein.
          Length = 512

 Score = 34.7 bits (76), Expect = 0.070
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = +3

Query: 495 KQHFSEVPTKPVLIQPESGPTNGKAVLRFTDWPFQIKSNVQPVAITVERAFTRA 656
           ++H ++    P++I PE    N  +V+ F    F+I S + P+A+  +   T A
Sbjct: 302 REHVNDENKLPIIIFPEGTCINNTSVMMFKKGSFEIGSTIYPIAVKYDTRLTDA 355


>AC006642-3|AAF39832.2|  410|Caenorhabditis elegans
           Acyltransferase-like protein 4,isoform b protein.
          Length = 410

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = +3

Query: 495 KQHFSEVPTKPVLIQPESGPTNGKAVLRFTDWPFQIKSNVQPVAITVERAF 647
           K+H +     P+LI PE    N  +V+ F    F+I + + P+A+  +  F
Sbjct: 185 KEHCTNPDKLPILIFPEGTCINNTSVMMFKKGSFEIGTTIYPIAMKYDSRF 235


>AC006642-2|AAF39831.1|  617|Caenorhabditis elegans
           Acyltransferase-like protein 4,isoform a protein.
          Length = 617

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = +3

Query: 495 KQHFSEVPTKPVLIQPESGPTNGKAVLRFTDWPFQIKSNVQPVAITVERAF 647
           K+H +     P+LI PE    N  +V+ F    F+I + + P+A+  +  F
Sbjct: 395 KEHCTNPDKLPILIFPEGTCINNTSVMMFKKGSFEIGTTIYPIAMKYDSRF 445


>Z29094-7|CAA82342.2|  453|Caenorhabditis elegans Hypothetical
           protein C07A9.8 protein.
          Length = 453

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
 Frame = +3

Query: 516 PTKPVLIQPESGPTNGKAVLRFTDWPFQIKSNVQPVAITVERAFTRATVQRRQYSAR-FP 692
           P   V+ +P+  P     +  FTDWPF+I    +   ++    +  AT +        F 
Sbjct: 7   PKCVVIEEPDDVPVKPPKIFDFTDWPFEIPDIFKRKELSYNYNYDLATSKSLMIVRMIFK 66

Query: 693 WRDAAW 710
           WR + W
Sbjct: 67  WRGSLW 72


>Z78410-9|CAB01637.2|  304|Caenorhabditis elegans Hypothetical
           protein C51E3.5 protein.
          Length = 304

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +3

Query: 192 VILMVIRIFLGVILWIASIILPNKWAVSHMLTTLACWTFGVYV 320
           +I++ + IF  VI+ I   + P   +  H+L TL C   G++V
Sbjct: 17  LIIIPVGIFSNVIMIICFFVNPRLRSPFHILLTLTCLADGIHV 59


>Z50806-1|CAA90689.1|  179|Caenorhabditis elegans Hypothetical
           protein M79.3 protein.
          Length = 179

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +3

Query: 525 PVLIQPESGPTNGKAVLRFTDWPFQIKSNVQPVAI 629
           PVL+ PE   +N   VL+F    F+   N+ PVAI
Sbjct: 9   PVLLFPEGYCSNNSKVLQFRKAIFEENVNIYPVAI 43


>U80838-7|AAC71112.3|  581|Caenorhabditis elegans Hypothetical
           protein F47F6.3 protein.
          Length = 581

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 20/90 (22%), Positives = 32/90 (35%)
 Frame = +3

Query: 378 CFDSLAAAHVFGTISLKRWKLPPFFASTLGIKNASQFSKKQHFSEVPTKPVLIQPESGPT 557
           CF  +  +  F  + L+ W+    F +    K   +  +K        KP  I  +   T
Sbjct: 114 CFALVLDSFAFNFMFLRLWQFSAGFVALFWSKIEQKLPEKNSEKSETAKPTWISEDDQVT 173

Query: 558 NGKAVLRFTDWPFQIKSNVQPVAITVERAF 647
               VL     P+ +   V    +TV  AF
Sbjct: 174 VALVVLGVCIMPYDVNVLVIRPLVTVVTAF 203


>AF045642-10|AAC02587.1|  459|Caenorhabditis elegans Hypothetical
           protein C17H12.9 protein.
          Length = 459

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -3

Query: 467 TQRRCEKWWQLPSFQTYGTKDMCSCKRIE 381
           T RR  KW + P FQ      + +CKR E
Sbjct: 280 TFRRMAKWLEEPEFQRMSALRLAACKRKE 308


>AF016433-10|AAB65387.1|  338|Caenorhabditis elegans Seven tm
           receptor protein 130 protein.
          Length = 338

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 20/99 (20%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
 Frame = +3

Query: 171 LLYLPIGVI-LMVIRIFLGVILWIASIILPNKWAVSHMLTTLACWTFGVYVKLKGQRDPR 347
           ++Y  I ++ L V+ +    IL+  + +L +  +   +++T+ C +F   + +       
Sbjct: 52  IIYATIEILTLPVMHLHGSGILFYVNSVLKDHISAGVIISTMYCGSFAFCISMLATH--- 108

Query: 348 CSVLVANYVTCFDSLAAAHVFGTISLKRWKLPPFFASTL 464
               +  Y+    +    H F  I++  W +PPFF  T+
Sbjct: 109 ---FIFRYIAVCKN-NKLHYFEGINVYLWLIPPFFFFTI 143


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,258,907
Number of Sequences: 27780
Number of extensions: 431001
Number of successful extensions: 1153
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)