Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30966
(748 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g11430.1 68416.m01394 phospholipid/glycerol acyltransferase f... 43 2e-04
At5g06090.1 68418.m00676 phospholipid/glycerol acyltransferase f... 40 0.001
At4g00400.1 68417.m00054 phospholipid/glycerol acyltransferase f... 35 0.066
At1g01610.1 68414.m00078 phospholipid/glycerol acyltransferase f... 32 0.35
At5g60620.1 68418.m07608 phospholipid/glycerol acyltransferase f... 32 0.46
At2g38110.1 68415.m04678 phospholipid/glycerol acyltransferase f... 31 0.81
At4g34110.1 68417.m04839 polyadenylate-binding protein 2 (PABP2)... 30 1.9
At4g14980.1 68417.m02302 DC1 domain-containing protein contains ... 29 2.5
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 29 2.5
At5g13230.1 68418.m01520 pentatricopeptide (PPR) repeat-containi... 29 3.3
At3g11325.1 68416.m01377 hypothetical protein 29 4.3
At2g31090.1 68415.m03797 expressed protein 29 4.3
At5g54020.1 68418.m06719 expressed protein 28 5.7
At4g01950.1 68417.m00260 phospholipid/glycerol acyltransferase f... 28 7.6
At3g12240.1 68416.m01527 serine carboxypeptidase S10 family prot... 28 7.6
At5g61950.1 68418.m07776 ubiquitin carboxyl-terminal hydrolase-r... 27 10.0
At3g50170.1 68416.m05485 hypothetical protein contains Pfam prof... 27 10.0
>At3g11430.1 68416.m01394 phospholipid/glycerol acyltransferase
family protein contains Pfam profile: PF01553
acyltransferase
Length = 502
Score = 42.7 bits (96), Expect = 2e-04
Identities = 56/210 (26%), Positives = 89/210 (42%), Gaps = 15/210 (7%)
Frame = +3
Query: 159 ALQFLLYLPIGVILMVIRIFLGVILWIASIILPNKWAVSHMLTTLACWTFGVYVKLKGQ- 335
AL LL++P G+IL VIRIFLG +L + WA T FG ++ +KG+
Sbjct: 237 ALIILLWIPFGIILAVIRIFLGAVLPL--------WA-----TPYVSQIFGGHIIVKGKP 283
Query: 336 -RDPRCS----VLVANYVTCFDSLAAAHVFG------TISLKRWK--LPPFFASTL-GIK 473
+ P + V + T D + ++V G T S+ R L P L I+
Sbjct: 284 PQPPAAGKSGVLFVCTHRTLMDPVVLSYVLGRSIPAVTYSISRLSEILSPIPTVRLTRIR 343
Query: 474 NASQFSKKQHFSEVPTKPVLIQPESGPTNGKAVLRFTDWPFQIKSNVQPVAITVERAFTR 653
+ KQ S+ +++ PE +LRF+ ++ + PVA+ F
Sbjct: 344 DVDAAKIKQQLSK---GDLVVCPEGTTCREPFLLRFSALFAELTDRIVPVAMNYRVGFFH 400
Query: 654 ATVQRRQYSARFPWRDAAWFLLSPATVYTL 743
AT R + D +F ++P VY +
Sbjct: 401 ATTAR-----GWKGLDPIFFFMNPRPVYEI 425
>At5g06090.1 68418.m00676 phospholipid/glycerol acyltransferase
family protein contains Pfam profile PF01553:
Acyltransferase
Length = 500
Score = 40.3 bits (90), Expect = 0.001
Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 8/201 (3%)
Frame = +3
Query: 159 ALQFLLYLPIGVILMVIRIFLGVILWIASIILPNKWAVSHMLTTLACWTFGVYVKLKGQR 338
AL LL++P G+IL +IRIF+G +L + WA+ + ++ + F V K Q
Sbjct: 235 ALIILLWIPFGIILAMIRIFVGFLLPL--------WAIPY-VSRIFNTRFIVKGKPPAQA 285
Query: 339 DP-RCSVL-VANYVTCFDSLAAAHVFG------TISLKRWKLPPFFASTLGIKNASQFSK 494
VL V + T D + ++V G T S+ R T +
Sbjct: 286 TTGNPGVLFVCTHRTLMDPVVLSYVLGRSIPAVTYSISRLSEILSPIPTFRLTRIRDVDA 345
Query: 495 KQHFSEVPTKPVLIQPESGPTNGKAVLRFTDWPFQIKSNVQPVAITVERAFTRATVQRRQ 674
+ E+ +++ PE +LRF+ ++ N+ PVA+ F AT R
Sbjct: 346 EMIKKELSNGDLVVYPEGTTCREPFLLRFSALFAELTDNIVPVAMNYRVGFFHATTAR-- 403
Query: 675 YSARFPWRDAAWFLLSPATVY 737
+ D +F ++P VY
Sbjct: 404 ---GWKGLDPIFFFMNPRPVY 421
>At4g00400.1 68417.m00054 phospholipid/glycerol acyltransferase
family protein
Length = 500
Score = 34.7 bits (76), Expect = 0.066
Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 14/208 (6%)
Frame = +3
Query: 156 NALQFLLYLPIGVILMVIRIFLGVILWIASIILPNKWAVSHMLTTLACWTFGVYVKLKGQ 335
NA+ L+LP G IL +IR++ ++ LP ++ V + L G+++ ++G
Sbjct: 246 NAIITYLWLPFGFILSIIRVYF-------NLPLPERF-VRYTYEML-----GIHLTIRGH 292
Query: 336 RDPRCS------VLVANYVTCFDSLAAAHVFG------TISLKRWK--LPPFFASTLGIK 473
R P S + V N+ T D + A G T S+ R L P A L
Sbjct: 293 RPPPPSPGTLGNLYVLNHRTALDPIIVAIALGRKICCVTYSVSRLSLMLSPIPAVALTRD 352
Query: 474 NASQFSKKQHFSEVPTKPVLIQPESGPTNGKAVLRFTDWPFQIKSNVQPVAITVERAFTR 653
A+ + + E ++I PE + +LRF+ ++ + PVA+ ++
Sbjct: 353 RATDAANMRKLLE--KGDLVICPEGTTCREEYLLRFSALFAELSDRIVPVAMNCKQGMFN 410
Query: 654 ATVQRRQYSARFPWRDAAWFLLSPATVY 737
T R +F W D +F ++P Y
Sbjct: 411 GTTVR---GVKF-W-DPYFFFMNPRPSY 433
>At1g01610.1 68414.m00078 phospholipid/glycerol acyltransferase
family protein similar to unknown protein GI:3335359
from [Arabidopsis thaliana]
Length = 503
Score = 32.3 bits (70), Expect = 0.35
Identities = 50/208 (24%), Positives = 86/208 (41%), Gaps = 14/208 (6%)
Frame = +3
Query: 156 NALQFLLYLPIGVILMVIRIFLGVILWIASIILPNKWAVSHMLTTLACWTFGVYVKLKGQ 335
NAL L+LP G +L V R++ ++ LP ++ V + L G+++ ++G
Sbjct: 247 NALIIYLWLPFGFMLSVFRVYF-------NLPLPERF-VRYTYEIL-----GIHLTIRGH 293
Query: 336 RDPRCS------VLVANYVTCFDSLAAAHVFG------TISLKRWK--LPPFFASTLGIK 473
R P S + V N+ T D + A G T S+ R L P A L
Sbjct: 294 RPPPPSPGKPGNLYVLNHRTALDPIIIAIALGRKITCVTYSVSRLSLMLSPIPAVALTRD 353
Query: 474 NASQFSKKQHFSEVPTKPVLIQPESGPTNGKAVLRFTDWPFQIKSNVQPVAITVERAFTR 653
+ ++ + E ++I PE +LRF+ ++ + PVA+ ++
Sbjct: 354 RVADAARMRQLLE--KGDLVICPEGTTCREPYLLRFSALFAELSDRIVPVAMNCKQGMFN 411
Query: 654 ATVQRRQYSARFPWRDAAWFLLSPATVY 737
T R +F W D +F ++P Y
Sbjct: 412 GTTVR---GVKF-W-DPYFFFMNPRPSY 434
>At5g60620.1 68418.m07608 phospholipid/glycerol acyltransferase
family protein contains Pfam PF01553: Acyltransferase
Length = 376
Score = 31.9 bits (69), Expect = 0.46
Identities = 17/62 (27%), Positives = 26/62 (41%)
Frame = +3
Query: 495 KQHFSEVPTKPVLIQPESGPTNGKAVLRFTDWPFQIKSNVQPVAITVERAFTRATVQRRQ 674
+ H + P+LI PE N + F F++ V P+AI + F A R+
Sbjct: 229 RDHVQGADSNPLLIFPEGTCVNNNYTVMFKKGAFELDCTVCPIAIKYNKIFVDAFWNSRK 288
Query: 675 YS 680
S
Sbjct: 289 QS 290
>At2g38110.1 68415.m04678 phospholipid/glycerol acyltransferase
family protein low similarity to SP|O87707 CicA protein
{Caulobacter crescentus}; contains Pfam profile PF01553:
Acyltransferase
Length = 501
Score = 31.1 bits (67), Expect = 0.81
Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 8/178 (4%)
Frame = +3
Query: 159 ALQFLLYLPIGVILMVIRIFLGVILWIASIILPNKWA-VSHMLTTLACWTFGVYVKLKGQ 335
AL L+LP+G +L +IR++ +I LP + A ++ LT + G
Sbjct: 250 ALLTFLWLPVGFVLSIIRVY-------TNIPLPERIARYNYKLTGIKLVVNGHPPPPPKP 302
Query: 336 RDPRCSVLVANYVTCFDSLAAAHVFGT-ISLKRWKLPPFFASTLGIKNASQFSKKQHFSE 512
P +LV N+ T D + A G IS + + F IK A ++++
Sbjct: 303 GQPG-HLLVCNHRTVLDPVVTAVALGRKISCVTYSISKFSELISPIK-AVALTRQREKDA 360
Query: 513 VPTKPVL------IQPESGPTNGKAVLRFTDWPFQIKSNVQPVAITVERAFTRATVQR 668
K +L I PE +LRF+ ++ + PVAI +++ T R
Sbjct: 361 ANIKRLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSMFNGTTTR 418
>At4g34110.1 68417.m04839 polyadenylate-binding protein 2 (PABP2)
non-consensus TA donor splice site at exon 2,
polyadenylate-binding protein - Triticum aestivum
(common wheat),PIR:T06979
Length = 443
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/83 (25%), Positives = 33/83 (39%)
Frame = +3
Query: 306 FGVYVKLKGQRDPRCSVLVANYVTCFDSLAAAHVFGTISLKRWKLPPFFASTLGIKNASQ 485
FG K RDP + + +V A +S K + P + + K +
Sbjct: 155 FGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQRKEDRR 214
Query: 486 FSKKQHFSEVPTKPVLIQPESGP 554
+ FS+V +PV +QP GP
Sbjct: 215 VRLQAQFSQV--RPVAMQPSVGP 235
>At4g14980.1 68417.m02302 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 470
Score = 29.5 bits (63), Expect = 2.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 445 HFSHRRWV*RTPHNFLKSNISLRCQ 519
HFSH V R N++ N+++RC+
Sbjct: 189 HFSHEEHVLRLDENYVTDNVNMRCR 213
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 109 AITEYVDRCFVEYLRCLPYIFYKILDEFMITP 14
A+ Y +C YLRC P Y +L E +TP
Sbjct: 100 AMERYWQQCIFNYLRCDPEDHYFLLTESPLTP 131
>At5g13230.1 68418.m01520 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 822
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 610 LLLIWNGQSVKRNTALPFVGPLSGCINTGFVGTSEKC 500
+L I + K N L F+G LSGC N G + ++C
Sbjct: 537 ILDIMKDRDCKPN-GLTFLGVLSGCSNAGLIDQGQEC 572
>At3g11325.1 68416.m01377 hypothetical protein
Length = 401
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 159 ALQFLLYLPIGVILMVIRIFLGVILWIASIILPNKWAVSHMLTTLAC 299
AL L+++P G++L IRI G ILP W +H ++ L C
Sbjct: 158 ALLILIWIPFGMVLSPIRILSG-------FILP-MWIRTHAMSILGC 196
>At2g31090.1 68415.m03797 expressed protein
Length = 75
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 162 LQFLLYLPIGVILMVIRIFLGVILWIASIIL 254
L FLL LP + +++ I +GVI+WI ++L
Sbjct: 9 LGFLLGLPFAFLSLLLSI-IGVIIWIVGLLL 38
>At5g54020.1 68418.m06719 expressed protein
Length = 556
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 433 GSCHHFSHRRWV*RTPHNFLKSNISLRCQ 519
G HF H V R N++ N+++RC+
Sbjct: 265 GDIVHFCHEEHVLRLDENYVTDNVNMRCR 293
>At4g01950.1 68417.m00260 phospholipid/glycerol acyltransferase
family protein contains Pfam profile PF01553:
Acyltransferase
Length = 520
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +3
Query: 528 VLIQPESGPTNGKAVLRFTDWPFQIKSNVQPVAITVERAFTRATVQRRQYSARFPWRDAA 707
+++ PE +LRF+ ++ + PVA+TV F T ++ D
Sbjct: 394 LVVCPEGTTCREPYLLRFSPLFTEVSDVIVPVAVTVHVTFFYGTT-----ASGLKALDPL 448
Query: 708 WFLLSPATVYTL 743
+FLL P YT+
Sbjct: 449 FFLLDPYPTYTI 460
>At3g12240.1 68416.m01527 serine carboxypeptidase S10 family protein
contains Pfam profile: PF00450 serine carboxypeptidase;
similar to serine carboxypeptidase I precursor
(SP:P37890) [Oryza sativa]
Length = 436
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 616 CTLLLIWNGQSVKRNTALP-FVGPLSGCINTGFVGTSEK 503
C L+LI + S LP F GPL + TG++G +K
Sbjct: 14 CVLVLIQHADSSSIIRYLPGFEGPLPFELETGYIGVGQK 52
>At5g61950.1 68418.m07776 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of unknown
function (DUF627)
Length = 1132
Score = 27.5 bits (58), Expect = 10.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 107 GSCGRKVNQQREIQWRKCIAIFTVFTNWSYSDGDQNI 217
G CG+K I R+C IFT+ W S+ ++ I
Sbjct: 1004 GGCGKKSYVDHII--RRCPPIFTIVLEWEKSETEKEI 1038
>At3g50170.1 68416.m05485 hypothetical protein contains Pfam profile
PF03140: Plant protein of unknown function
Length = 541
Score = 27.5 bits (58), Expect = 10.0
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 11/58 (18%)
Frame = -3
Query: 479 GVLYTQRRCEKWWQLPSFQTY----------GTKDMCS-CKRIETCHIVSNQHTTSWV 339
GV + +R+ +++W + Y GTK + S E CHI S+ H TS++
Sbjct: 368 GVKFRKRKTDRFWDIEFKNGYLEIPKLLIHDGTKSLFSNLIAFEQCHIESSNHITSYI 425
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,946,310
Number of Sequences: 28952
Number of extensions: 385582
Number of successful extensions: 1049
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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