Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30956
         (490 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    24   0.64 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.5  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   2.6  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   2.6  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   4.5  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   7.9  

>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 24.2 bits (50), Expect = 0.64
 Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = +2

Query: 284 GMFVRLVHF*FQNETIKRTNALVRSVV-YVILYVPCAILKFYSLKRIIIFHMVFLFKHYM 460
           G+F  ++ F      + +T   V +V  +V  Y P A + FY L        + + KH++
Sbjct: 82  GLFC-ILKFALDGLMLDKTGICVSNVFDFVHFYYPVATMSFYVLNFFGSIQFIIISKHWV 140


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 13/52 (25%), Positives = 28/52 (53%)
 Frame = +1

Query: 31  SIHLSYISCPVRSLTYIH*GEEETFVIGRINFLVLEILKFFICSLVLRVACV 186
           ++HL  + C +    Y+H      F+I  ++ L L  + +F C+L++ + C+
Sbjct: 249 TVHLLLLVC-IYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALII-LLCI 298


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 320 NETIKRTNALVRSVVYVILYVPCAILKFY 406
           +ET    N  V+  VYVILY+   +   Y
Sbjct: 127 HETNLLRNVSVQFFVYVILYILATVFLAY 155


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 320 NETIKRTNALVRSVVYVILYVPCAILKFY 406
           +ET    N  V+  VYVILY+   +   Y
Sbjct: 127 HETNLLRNVSVQFFVYVILYILATVFLAY 155


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +1

Query: 70  LTYIH*GEEETFVIGRINFLVLEILKFFICSLVLRV 177
           + YI   E ET   G +   VLE++    CS   RV
Sbjct: 249 IPYIQYTETETKTWGSVFNTVLELMPKHACSEYCRV 284


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +2

Query: 356 SVVYVILYVPCAILKFYSLKRIIIFHMVFLFKHYMF 463
           SVVYV++      L +   K +++  + F+ K  +F
Sbjct: 267 SVVYVLILYILESLLYMVTKLVVVTFLKFIKKIQIF 302


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,983
Number of Sequences: 336
Number of extensions: 1855
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)