Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30949
(687 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 452 e-128
SB_56| Best HMM Match : Actin (HMM E-Value=0) 452 e-127
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 452 e-127
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 451 e-127
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 450 e-127
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 349 9e-97
SB_54| Best HMM Match : Actin (HMM E-Value=0) 251 5e-67
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 231 4e-61
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 211 3e-55
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 202 2e-52
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 134 6e-32
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 110 9e-25
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 71 9e-13
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 68 8e-12
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5) 32 0.38
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 32 0.38
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 32 0.38
SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054) 32 0.50
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_55729| Best HMM Match : YajC (HMM E-Value=0.56) 29 4.7
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 4.7
SB_7681| Best HMM Match : Annexin (HMM E-Value=0) 29 4.7
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 28 8.1
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 28 8.1
SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 28 8.1
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 452 bits (1115), Expect = e-128
Identities = 215/228 (94%), Positives = 224/228 (98%)
Frame = +2
Query: 2 FETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 181
FETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGR
Sbjct: 87 FETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGR 146
Query: 182 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELP 361
DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAA+S+SLEKSYELP
Sbjct: 147 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELP 206
Query: 362 DGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGT 541
DGQVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYANTV+SGGT
Sbjct: 207 DGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGT 266
Query: 542 TMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 685
TMYPGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 267 TMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLST 314
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 452 bits (1114), Expect = e-127
Identities = 215/228 (94%), Positives = 224/228 (98%)
Frame = +2
Query: 2 FETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 181
FETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGR
Sbjct: 124 FETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGR 183
Query: 182 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELP 361
DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAA+S+SLEKSYELP
Sbjct: 184 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELP 243
Query: 362 DGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGT 541
DGQVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYANTV+SGG+
Sbjct: 244 DGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGS 303
Query: 542 TMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 685
TMYPGIADRMQKEIT+LAP T+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 304 TMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLST 351
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 452 bits (1114), Expect = e-127
Identities = 215/228 (94%), Positives = 224/228 (98%)
Frame = +2
Query: 2 FETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 181
FETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGR
Sbjct: 125 FETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 182 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELP 361
DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAA+S+SLEKSYELP
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMTTAASSSSLEKSYELP 244
Query: 362 DGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGT 541
DGQVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYANTV+SGG+
Sbjct: 245 DGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGS 304
Query: 542 TMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 685
TMYPGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 305 TMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLST 352
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 451 bits (1112), Expect = e-127
Identities = 214/228 (93%), Positives = 224/228 (98%)
Frame = +2
Query: 2 FETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 181
FETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGR
Sbjct: 125 FETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGR 184
Query: 182 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELP 361
DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAA+S+SLEKSYELP
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMETAASSSSLEKSYELP 244
Query: 362 DGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGT 541
DGQVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYANTV+SGG+
Sbjct: 245 DGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGS 304
Query: 542 TMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 685
TMYPGIADRMQKEIT+LAP T+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 305 TMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLST 352
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 450 bits (1108), Expect = e-127
Identities = 215/228 (94%), Positives = 224/228 (98%)
Frame = +2
Query: 2 FETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 181
FETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGR
Sbjct: 124 FETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGR 183
Query: 182 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELP 361
DLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVALDFEQEMATAAAS+SLEKSYELP
Sbjct: 184 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMATAAASSSLEKSYELP 243
Query: 362 DGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGT 541
DGQVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYANTV+SGG+
Sbjct: 244 DGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGS 303
Query: 542 TMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 685
TM+PGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 304 TMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLST 351
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 349 bits (859), Expect = 9e-97
Identities = 181/228 (79%), Positives = 190/228 (83%)
Frame = +2
Query: 2 FETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 181
FETFNSPAMYVAIQAVLSLYASGRTTGIV+DS G + H +
Sbjct: 125 FETFNSPAMYVAIQAVLSLYASGRTTGIVMDS------------GDGVSHTV-------- 164
Query: 182 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELP 361
I ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAA+S+S+EKSYELP
Sbjct: 165 -------PIYEERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSIEKSYELP 217
Query: 362 DGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGT 541
DGQVITIGNERFRCPEAL QPSFLGMES GIHET YNSIMKCDVDIRKDLYANTVMSGGT
Sbjct: 218 DGQVITIGNERFRCPEALLQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVMSGGT 277
Query: 542 TMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 685
TMYPG+ADRMQKEI+ALAPST+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 278 TMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSILASLST 325
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 251 bits (614), Expect = 5e-67
Identities = 112/178 (62%), Positives = 141/178 (79%)
Frame = +2
Query: 2 FETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 181
FE+FN P MYVA+QAV++LYASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGR
Sbjct: 2169 FESFNVPCMYVAVQAVMALYASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGR 2228
Query: 182 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELP 361
DLT YL +++TERGYSF +TAE++I+RD+KE LCY A+D+E+E+ A S E Y LP
Sbjct: 2229 DLTHYLQRLVTERGYSFQSTAEQQIIRDLKETLCYCAMDYERELKEAETSDDCEAPYMLP 2288
Query: 362 DGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSG 535
DGQ I IG+ERFR E LFQPS LG + GIHE+++ SI KCD+D+R +L+ N V+SG
Sbjct: 2289 DGQSIRIGSERFRAAEPLFQPSLLGRDIDGIHESIFKSIKKCDIDLRAELFHNIVLSG 2346
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 231 bits (565), Expect = 4e-61
Identities = 102/197 (51%), Positives = 140/197 (71%)
Frame = +2
Query: 2 FETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 181
FE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AGR
Sbjct: 128 FENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGR 187
Query: 182 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELP 361
D+T YL+K++ RGY+F TA+ E VR +KEKLCYV + EQE A +T L + Y LP
Sbjct: 188 DITKYLIKLMLLRGYAFNHTADFETVRMMKEKLCYVGYNIEQEQKLALETTVLVEQYTLP 247
Query: 362 DGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGT 541
DG+V+ + ERF PEALFQP + +E G+ E ++N+I D+D R + Y + V+SGG+
Sbjct: 248 DGRVVKLSGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGS 307
Query: 542 TMYPGIADRMQKEITAL 592
TMYPG+ R+++EI L
Sbjct: 308 TMYPGLPSRLEREIKQL 324
Score = 36.7 bits (81), Expect = 0.018
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 503 KDLYANTVMSGGTTMYPGIADRMQKEITA-LAPSTIKIKIIAPPERKYSVWIGGSILASL 679
K LY V+ G T+ Q +TA KI+I PP RK+ V++GG++LA +
Sbjct: 322 KQLYLERVLKGDTSKLSSGMGMEQIPLTADYLLQKFKIRIEDPPRRKHMVFMGGAVLADI 381
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 211 bits (516), Expect = 3e-55
Identities = 96/121 (79%), Positives = 111/121 (91%)
Frame = +2
Query: 323 AASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIR 502
A S LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGME+ GIHE +YN IMKCDVDIR
Sbjct: 5 ANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIR 64
Query: 503 KDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLS 682
KDLY+N V+SGG+TM+PGIADRMQKEI LA +++K+K+IAPPERKYSVWIGGSILASLS
Sbjct: 65 KDLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLS 124
Query: 683 T 685
T
Sbjct: 125 T 125
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 202 bits (494), Expect = 2e-52
Identities = 95/104 (91%), Positives = 100/104 (96%)
Frame = +2
Query: 2 FETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 181
FE FNSPA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLAGR
Sbjct: 3 FEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGR 62
Query: 182 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 313
DLTDYLMK++TERGYSFTTTAEREIVRDIKEKLCYVALDF QE+
Sbjct: 63 DLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLCYVALDFYQEI 106
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 134 bits (324), Expect = 6e-32
Identities = 58/92 (63%), Positives = 81/92 (88%)
Frame = +2
Query: 2 FETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 181
FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I+R D+AGR
Sbjct: 150 FETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAGR 209
Query: 182 DLTDYLMKILTERGYSFTTTAEREIVRDIKEK 277
D++ YL +L + G+ F +++E EIVR IKE+
Sbjct: 210 DVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE 241
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = +2
Query: 452 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPG 556
I E + +I K D+D+R+ LY+N V+SGG+T++ G
Sbjct: 257 IIEVLAFAIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 110 bits (265), Expect = 9e-25
Identities = 57/132 (43%), Positives = 81/132 (61%), Gaps = 1/132 (0%)
Frame = +2
Query: 41 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE- 217
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 218 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 397
RG++FT+++ +IV DIKEK+CY++ D +E+ + L K Y LPDGQ+I+IG E
Sbjct: 827 RGHNFTSSSGWQIVNDIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMISIGYECI 886
Query: 398 RCPEALFQPSFL 433
E LF+P L
Sbjct: 887 SSMEPLFRPDLL 898
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 70.9 bits (166), Expect = 9e-13
Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 8/102 (7%)
Frame = +2
Query: 35 AIQAVLSLYASG-------RT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 190
A +AVL+L AS RT TG V+DSGDGV+H +P+ EGY + I + +AGRD+T
Sbjct: 40 ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 99
Query: 191 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA 316
++ ++L ER E + IKE+ Y+ D +E A
Sbjct: 100 FFVQQLLREREMGIPPEQSMETAKTIKERWGYICPDIAKEFA 141
Score = 69.3 bits (162), Expect = 3e-12
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 17/118 (14%)
Frame = +2
Query: 374 ITIGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMY 550
+ + ERF PE F P F + + + E V N I C +D+R+ LY N V+SGG+TM+
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMF 255
Query: 551 PGIADRMQKEIT----------------ALAPSTIKIKIIAPPERKYSVWIGGSILAS 676
R+Q++I + P I+ ++I+ ++Y+VW GGS+LAS
Sbjct: 256 RDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQRYAVWFGGSMLAS 313
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 67.7 bits (158), Expect = 8e-12
Identities = 29/85 (34%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Frame = +2
Query: 434 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 613
G + G+ + V S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P ++++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205
Query: 614 KII---APPERKYSVWIGGSILASL 679
K+I + E++++ WIGGSILASL
Sbjct: 206 KLISNNSSVEKRFNPWIGGSILASL 230
Score = 62.1 bits (144), Expect = 4e-10
Identities = 28/72 (38%), Positives = 46/72 (63%)
Frame = +2
Query: 2 FETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 181
FE +N PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG
Sbjct: 57 FEKYNVPAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGD 116
Query: 182 DLTDYLMKILTE 217
+T ++ E
Sbjct: 117 FITAQCRQMFEE 128
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 49.6 bits (113), Expect = 2e-06
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Frame = +2
Query: 440 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST----- 604
E + + +S++ C +D RK L N V+ GGT M PG R+ +EI L S
Sbjct: 54 EEKSLATALLDSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDK 113
Query: 605 --IK-IKIIAPP-ERKYSVWIGGSILASL 679
IK +K+ PP + W+GG+I SL
Sbjct: 114 LFIKTVKMHQPPVNANITAWLGGAIFGSL 142
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 32.7 bits (71), Expect = 0.29
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 404 PEALFQPSFLGMESCGIHETV 466
PE +FQPS LG+E GI ET+
Sbjct: 3 PEIIFQPSMLGLEQAGITETM 23
>SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5)
Length = 257
Score = 32.3 bits (70), Expect = 0.38
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = -3
Query: 253 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGV----GDTISGVEH 86
F +SG + D H++ + +TS V+ + G + D + T S E
Sbjct: 134 FGISGTANTEEQIDVDKHQITNKASTSSVEKANTAGTTGGTQDQHATQGNKASTCSFEEA 193
Query: 85 DTGGTTGGVQ 56
+T GTTGG Q
Sbjct: 194 NTAGTTGGTQ 203
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 32.3 bits (70), Expect = 0.38
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 77 TGIVLDSGDGVSHTVPI 127
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 32.3 bits (70), Expect = 0.38
Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 9/130 (6%)
Frame = +2
Query: 2 FETFNSPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 163
FE +N A+ A LS Y S +V+D+G +H VP++ G + A+ R
Sbjct: 326 FEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVIKKAVRR 385
Query: 164 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA---AAST 334
+ +L E +F ++ +KE CYV+ F ++M A
Sbjct: 386 -----------QLHVLDE---TF-------VINQVKEDTCYVSSQFYKDMEIARQRGKEN 424
Query: 335 SLEKSYELPD 364
++ + Y LPD
Sbjct: 425 TIVREYVLPD 434
>SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)
Length = 1079
Score = 31.9 bits (69), Expect = 0.50
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +1
Query: 448 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 627
R P+DR + HH RR H +HR H R++R+ +G+ L+ +D
Sbjct: 830 RPPQDRHRRHHHRRRHHN----NKHRKHSREHSRRRHQRKHHKGNDAQETLEEIFED--D 883
Query: 628 PREEVLRMDRWIHPG 672
R+E +D +++ G
Sbjct: 884 ARDEKENVDEFVNGG 898
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +1
Query: 424 FLPGYGIVRHP-RDRVQLHHEV-RRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRA 597
F+ G G++ H + Q+ E R + G +HRH R +HH ++ R+ + + A
Sbjct: 894 FVNGGGMMEHELQSDSQISQETGARENDPGKKHKHRHRRHHHHRRQHNRKIKKHRRKHSA 953
Query: 598 LDHQ 609
H+
Sbjct: 954 RKHE 957
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -3
Query: 217 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGVGDTISGVEHDTGG 74
L E + +V Q + GV S G+G G TISG D+GG
Sbjct: 1474 LQEAMMPIVSQQTCAAAMRRWGVVTSRMICGGFGAGSTISGCFGDSGG 1521
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = -1
Query: 177 PAKSRRRMAWGRA*PS*MGTVWETPSPESSTIPVVRPEAYSESTAW 40
P+ + +W P T W +PSP+ T P ++T+W
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSW 138
>SB_55729| Best HMM Match : YajC (HMM E-Value=0.56)
Length = 654
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -3
Query: 160 EDGVGQSVTFVDGYGVGDTISGVEHDTGGTTGG 62
+DG G VDG GVGD G + D G GG
Sbjct: 9 DDGDGGGDDGVDGGGVGDDGDGDDSDCGDDGGG 41
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -1
Query: 666 MDPPIHTEYFLSGGAMILILMVEGARAVISFCILSAIPGYMV-VPPD 529
+DPP+ +Y L+GG ++ ++ FCI G++V PP+
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCIFQ---GFVVPTPPE 801
>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
Length = 426
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Frame = +1
Query: 451 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH--R 624
HP ++ HHE R P H H P ++ E P DH++++
Sbjct: 316 HPPEQ---HHEEEERGVHPPGEHHEEEERGAHPPGQDLEEEERGAHPPGQDHEEEERGAH 372
Query: 625 SPREEVLRMDRWIHP 669
P + +R +HP
Sbjct: 373 PPEQHHEEEERGVHP 387
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 518 NTVMSGGTTMYPGIADRMQKEITALAP 598
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Frame = +1
Query: 448 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYR--RQDAEGDHRPR--ALDHQDQ 615
RH R R + R RH RH H R++ R + R R H+
Sbjct: 23 RHERSRHETRQHERSRHKTSRHESSRHKTSRHERSRHKTSRHETSRHERSRHETRQHERS 82
Query: 616 DHRSPREEVLRMDRWIH 666
H++ R E R ++ H
Sbjct: 83 RHKTSRHETSRHEKSRH 99
>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/69 (26%), Positives = 27/69 (39%)
Frame = +1
Query: 403 SRGSLPAFLPGYGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGD 582
+R ++P LPG H R R HH ++H ++ HH Q +
Sbjct: 930 ARPNMPGTLPGNYPESHKRHRHSHHHH------------YQHYQYNHHHDHQSHQHHDSH 977
Query: 583 HRPRALDHQ 609
H LDH+
Sbjct: 978 HHREVLDHK 986
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = +1
Query: 454 PRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 624
PRDR + E RRR P R+ R + Y PR RR+ R R D R
Sbjct: 854 PRDRRRRSPEHRRRREASPPRRDR--KRYDSPPRRRRRSPSPPPRRRRRDSYSPSRR 908
>SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 515 ANTVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 634
AN V+ + + +R+ KE+ L +K KIIAPPE
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNRLTELGIVKEKIIAPPE 84
>SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/73 (24%), Positives = 27/73 (36%)
Frame = +1
Query: 448 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 627
RH R R + R RH RH H R++ E R+ H+ + H
Sbjct: 63 RHERSRHETRQHERSRHKTSRHESSRHKTSRHGRSRHKTSRHETSRHERS-RHETRQHER 121
Query: 628 PREEVLRMDRWIH 666
R + R ++ H
Sbjct: 122 SRHKTSRHEKSRH 134
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 269 KEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPE 409
+EK+ L+ E E A + LEK +L + +G+ER RC +
Sbjct: 2983 REKIVTSDLESELETERALQANELEKQNKLLEKLSADLGHERSRCED 3029
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 27.9 bits (59), Expect = 8.1
Identities = 24/67 (35%), Positives = 30/67 (44%)
Frame = +1
Query: 445 VRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 624
V HPR V +H HP V HR +H RQD DH + DH QD
Sbjct: 606 VVHPRRDV-VHPRQDVVHPRQDVDHHRQDVDHH------RQDV--DHHRQDADHHRQDVV 656
Query: 625 SPREEVL 645
PR++V+
Sbjct: 657 HPRQDVV 663
>SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Frame = +1
Query: 475 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH--RSPREEVLR 648
HHE R P + H H P ++ E P H++++ P E
Sbjct: 154 HHEEEERGVHPPGQHHEEEERGVHPPGQHHEEEERGVHPPGQHHEEEERGVHPPEEHHEE 213
Query: 649 MDRWIHP 669
+R +HP
Sbjct: 214 EERGVHP 220
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/65 (23%), Positives = 29/65 (44%)
Frame = +1
Query: 445 VRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 624
++HP ++ H + ++ P + HHVP + +A G+ R Q+ D+
Sbjct: 550 IQHPVEKAIQHAQEKKYQP----ELEKKTIKSHHVPGQDKTEARGEERIAVWSTQNGDYY 605
Query: 625 SPREE 639
R+E
Sbjct: 606 DQRDE 610
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,586,017
Number of Sequences: 59808
Number of extensions: 413480
Number of successful extensions: 1624
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1599
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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