Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30947
(570 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 357 5e-99
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 352 1e-97
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 349 7e-97
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 349 7e-97
SB_56| Best HMM Match : Actin (HMM E-Value=0) 348 2e-96
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 1e-47
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 174 5e-44
SB_54| Best HMM Match : Actin (HMM E-Value=0) 129 1e-30
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 114 5e-26
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 87 1e-17
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 85 3e-17
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 59 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 56 2e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 2e-08
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 52 3e-07
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 8e-07
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.002
SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 32 0.38
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.88
SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6) 30 1.2
SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09) 30 1.5
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 29 2.0
SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27) 29 2.7
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 28 4.7
SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29) 28 6.2
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 28 6.2
SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 28 6.2
SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9) 28 6.2
SB_31099| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08) 27 8.2
SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 27 8.2
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 357 bits (877), Expect = 5e-99
Identities = 164/167 (98%), Positives = 166/167 (99%)
Frame = +1
Query: 70 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 429
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 430 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVCHTVPIY 570
TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV HTVPIY
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIY 167
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 352 bits (866), Expect = 1e-97
Identities = 161/167 (96%), Positives = 165/167 (98%)
Frame = +1
Query: 70 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
M DDD+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 429
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 430 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVCHTVPIY 570
TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV HTVPIY
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIY 167
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 349 bits (859), Expect = 7e-97
Identities = 161/167 (96%), Positives = 165/167 (98%)
Frame = +1
Query: 70 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
M DD++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 429
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 430 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVCHTVPIY 570
TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV HTVPIY
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIY 167
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 349 bits (859), Expect = 7e-97
Identities = 161/165 (97%), Positives = 164/165 (99%)
Frame = +1
Query: 76 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
+DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 256 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 435
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 436 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVCHTVPIY 570
IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV HTVPIY
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIY 166
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 348 bits (855), Expect = 2e-96
Identities = 160/165 (96%), Positives = 164/165 (99%)
Frame = +1
Query: 76 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
+D+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 256 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 435
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 436 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVCHTVPIY 570
IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV HTVPIY
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIY 166
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 186 bits (452), Expect = 1e-47
Identities = 84/89 (94%), Positives = 86/89 (96%)
Frame = +1
Query: 76 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
DDDVAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 256 RGILTLKYPIEHGIITNWDDMEKIWHHTF 342
RGILTLKYPIEHGI+TNWDDMEKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 95.9 bits (228), Expect = 2e-20
Identities = 45/52 (86%), Positives = 48/52 (92%)
Frame = +1
Query: 415 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVCHTVPIY 570
N + M +IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV HTVPIY
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIY 129
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 174 bits (423), Expect = 5e-44
Identities = 80/164 (48%), Positives = 111/164 (67%), Gaps = 3/164 (1%)
Frame = +1
Query: 88 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 261
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 262 ILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 438
+L + YP+++GI+ NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 439 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVCHTVPIY 570
MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV H P+Y
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVY 170
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 129 bits (312), Expect = 1e-30
Identities = 58/83 (69%), Positives = 69/83 (83%)
Frame = +1
Query: 322 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 501
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 502 ASGRTTGIVLDSGDGVCHTVPIY 570
ASGRTTG V D GDGV HTVP+Y
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVY 2211
Score = 62.5 bits (145), Expect = 2e-10
Identities = 32/64 (50%), Positives = 42/64 (65%)
Frame = +1
Query: 4 PGLQAAVESIPASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGR 183
PG A +I AS T+ F+ V +V+DNGSG CKAG + D++PR VFP+IVGR
Sbjct: 2070 PGPPAVAMNI-ASVTKQQAAFEQNGGTV--VVIDNGSGFCKAGLSTDESPRVVFPAIVGR 2126
Query: 184 PRHQ 195
PRH+
Sbjct: 2127 PRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 114 bits (274), Expect = 5e-26
Identities = 48/67 (71%), Positives = 61/67 (91%)
Frame = +1
Query: 370 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 549
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 550 CHTVPIY 570
H+VPIY
Sbjct: 186 SHSVPIY 192
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 86.6 bits (205), Expect = 1e-17
Identities = 37/97 (38%), Positives = 63/97 (64%)
Frame = +1
Query: 280 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 459
PI+ G+I +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 460 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVCHTVPIY 570
PA ++ +VL+ +A+GR+ G+V+DSG VP++
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVH 99
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 85.4 bits (202), Expect = 3e-17
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = +1
Query: 436 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVCHTVPIY 570
IMFE FNSPA+YVAIQAVLSLYASGRTTG+V DSGDGV H VPIY
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIY 45
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +1
Query: 94 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 195
LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1359 LVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 56.4 bits (130), Expect = 2e-08
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Frame = +1
Query: 31 IPASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 210
IP + + ++ FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 683 IPRTKKRRYS-FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
Query: 211 --MGQKD-SYVGDEAQSKRGILTL 273
+ KD GD A +K G++ L
Sbjct: 742 DNVNVKDYKKYGDAAVAKSGVMHL 765
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +1
Query: 481 QAVLSLYASGRTTGIVLDSGDGVCHTVPIY 570
Q LSLYASG T G+ L SG IY
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIY 796
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +1
Query: 208 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 387
G+ D ++GDEA K T K+PI H I+ +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 31.5 bits (68), Expect = 0.50
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 517 TGIVLDSGDGVCHTVPI 567
TG V+DSGDGV H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 52.0 bits (119), Expect = 3e-07
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 8/170 (4%)
Frame = +1
Query: 85 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 264
+A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 233 MATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKDY 284
Query: 265 LTLKY--PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 438
L Y P + G + NWD ++IW +TF E + M +I
Sbjct: 285 SALFYVLPFQKGFLVNWDVEKQIWDYTFGKE--------------------GLEDAMDEI 324
Query: 439 MFETFNSPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVCHTVPIY 570
+FE +N A+ A LS Y S +V+D+G H VP++
Sbjct: 325 LFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVF 374
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 50.8 bits (116), Expect = 8e-07
Identities = 21/39 (53%), Positives = 31/39 (79%)
Frame = -1
Query: 192 VARATHDGREDGAGRVVAGETGLAHAGAIVDYKRSNIVV 76
+AR+ DG E+G+G +V+GETGLAH GAI+D + +I+V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +1
Query: 325 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 504
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 505 SGRTTGIV 528
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +2
Query: 101 STMAPACARPVSPATTRPAPSSRPSWVALATRA*WSVWARKTPTWVTRP 247
S P+ R TT+P P +PSWV + + W TW RP
Sbjct: 36 SPSKPSDTRIADTTTTKPFPGYQPSWVKVK----YGAWYLNPKTWKARP 80
>SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1974
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +1
Query: 415 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVCHTVP 564
NR + +++ E S ++ + +L+LY RT D+ + CHT P
Sbjct: 437 NRVEFVKLLLENGVSMGQFLTPERLLALYRGVRTCNATPDNNNRACHTTP 486
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 31.9 bits (69), Expect = 0.38
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 65 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 169
S C T+L+R T+ APA +P+SPAT P +R
Sbjct: 632 SSCLATLLVRPLETIPAPAPTKPISPATPASGPPTR 667
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 31.9 bits (69), Expect = 0.38
Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 8/39 (20%)
Frame = +1
Query: 475 AIQAVLSLYASG-------RT-TGIVLDSGDGVCHTVPI 567
A +AVL+L AS RT TG V+DSGDGV H +P+
Sbjct: 40 ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPV 78
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.1 bits (67), Expect = 0.66
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 271 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANRE 423
L+ P + ++T+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 30.7 bits (66), Expect = 0.88
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 412 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 528
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6)
Length = 697
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 65 SRCATTMLLR-L*STMAPACARPVSPATTRPAPSSR 169
S C T+L+R L +T APA P SPAT P R
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPATPASGPPIR 56
>SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09)
Length = 645
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = -1
Query: 432 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSL 253
G +L V LG+ GFG V G + + GV+P L+ I + D ++ + +D SL
Sbjct: 157 GGILAVALGILAGFGLAMAV---GTPFISLAGVLPFLILGIGIDDMFIIINEMDRQDNSL 213
Query: 252 AL 247
++
Sbjct: 214 SV 215
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 56 TQSSRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 169
T S C T+L+R T+ APA P SPAT P R
Sbjct: 109 TSLSSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 147
>SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27)
Length = 522
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +2
Query: 17 LP*SQYQRPQHKHTQSSRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 169
LP + P T S C +L+R T+ APA P SPAT P R
Sbjct: 397 LPADRRSEPLSAKTIVSSCLAPLLVRPLETIPAPAPTTPTSPATPASGPPIR 448
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +1
Query: 400 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 528
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 50 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 175
K T ++ ATT + +T PA P +P TT P ++ P+
Sbjct: 63 KPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 50 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 175
K T ++ ATT + +T PA P P TT P ++ P+
Sbjct: 133 KPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPT 174
>SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 65 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 169
S C T+L+R T+ APA P SPAT P R
Sbjct: 72 SSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 107
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 197 PWWRGRPTMDGKTARGASSPAKPALHMPEP 108
P W + G T R PAKP+L++P P
Sbjct: 530 PKWLQQVKDGGNTNRRTRIPAKPSLNLPSP 559
>SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29)
Length = 1851
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 65 SRCATTMLLR-L*STMAPACARPVSPAT 145
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 27.9 bits (59), Expect = 6.2
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = -2
Query: 557 VWQ--TPSPESSTIPVVRPE-------AYSESTAWMATYMAGELKVSNMIWVIFSLLALG 405
VW+ T P + T+P + + Y S +W+ L N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 404 LRGASVSSTGCSSGATRSSL*KVWCQIFSMSSQLVMIPCSMGYFRVRIPLLLWAS 240
L A + T C T +L ++ ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1411
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 65 SRCATTMLLR-L*STMAPACARPVSPAT 145
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9)
Length = 461
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 65 SRCATTMLLR-L*STMAPACARPVSPAT 145
S C T+L+R L +T APA P SPAT
Sbjct: 14 SSCLATLLVRPLETTPAPAPTTPTSPAT 41
>SB_31099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 319
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = -2
Query: 491 STAWMATYMAGELKVSNMIWV---IFSLLALGL 402
S AW+ + + EL+ S +WV IFS+L +G+
Sbjct: 163 SVAWLCSLLYLELEASLYVWVPSLIFSILIIGV 195
>SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08)
Length = 1258
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +2
Query: 5 PGCRLP*SQYQRPQHKHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAP 160
P +LP +Q Q + + + L+L ST+ P+ P++PA P P
Sbjct: 157 PITQLPSTQLPSTQAPINPTPINSNSHQLQLLSTLIPSTTAPINPAAINPTP 208
>SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1077
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +1
Query: 67 KMCDDDVAALVVDNG-SGMCKAGFAGD 144
++CD D + +N MCKAG+ GD
Sbjct: 487 RLCDKDAVCRLENNAIKCMCKAGYTGD 513
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 191 WRGRPTMDGKTARGASSPAKPALHMPEP 108
W + G T R PAKPAL++P P
Sbjct: 72 WLQQVKDGGNTNRRTRIPAKPALNLPSP 99
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,954,312
Number of Sequences: 59808
Number of extensions: 379863
Number of successful extensions: 1399
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1394
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1349364063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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