Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30947
(570 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 330 5e-91
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 329 7e-91
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 329 7e-91
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 329 9e-91
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 329 9e-91
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 328 1e-90
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 328 1e-90
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 328 1e-90
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 328 1e-90
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 304 3e-83
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 243 8e-65
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 213 7e-56
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 184 5e-47
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 135 2e-32
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 132 2e-31
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 104 5e-23
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 93 2e-19
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 82 2e-16
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 79 3e-15
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 43 2e-04
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 43 2e-04
At4g27520.1 68417.m03952 plastocyanin-like domain-containing pro... 31 0.41
At2g19780.1 68415.m02311 leucine-rich repeat family protein / ex... 29 2.2
At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2 (... 29 2.2
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 2.2
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 2.2
At3g04570.1 68416.m00485 DNA-binding protein-related contains Pf... 28 5.0
At1g73880.1 68414.m08556 UDP-glucoronosyl/UDP-glucosyl transfera... 28 5.0
At5g25280.2 68418.m02999 serine-rich protein-related contains so... 27 6.7
At5g25280.1 68418.m02998 serine-rich protein-related contains so... 27 6.7
At3g15730.1 68416.m01993 phospholipase D alpha 1 / PLD alpha 1 (... 27 6.7
At1g13830.1 68414.m01623 beta-1,3-glucanase-related similar to b... 27 6.7
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 27 8.8
At4g26670.1 68417.m03842 mitochondrial import inner membrane tra... 27 8.8
At3g32904.1 68416.m04164 hypothetical protein 27 8.8
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 8.8
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 330 bits (810), Expect = 5e-91
Identities = 151/164 (92%), Positives = 158/164 (96%)
Frame = +1
Query: 79 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 258
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 259 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 438
GILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 439 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVCHTVPIY 570
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV HTVPIY
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 168
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 329 bits (809), Expect = 7e-91
Identities = 151/164 (92%), Positives = 157/164 (95%)
Frame = +1
Query: 79 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 258
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 259 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 438
GILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 439 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVCHTVPIY 570
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV HTVPIY
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 168
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 329 bits (809), Expect = 7e-91
Identities = 151/164 (92%), Positives = 157/164 (95%)
Frame = +1
Query: 79 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 258
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 259 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 438
GILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 439 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVCHTVPIY 570
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV HTVPIY
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 168
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 329 bits (808), Expect = 9e-91
Identities = 150/164 (91%), Positives = 157/164 (95%)
Frame = +1
Query: 79 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 258
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 259 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 438
GILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 439 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVCHTVPIY 570
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV HTVPIY
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 168
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 329 bits (808), Expect = 9e-91
Identities = 150/164 (91%), Positives = 157/164 (95%)
Frame = +1
Query: 79 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 258
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 259 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 438
GILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 439 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVCHTVPIY 570
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV HTVPIY
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 168
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 328 bits (807), Expect = 1e-90
Identities = 151/164 (92%), Positives = 157/164 (95%)
Frame = +1
Query: 79 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 258
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 259 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 438
GILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 439 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVCHTVPIY 570
MFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV HTVPIY
Sbjct: 125 MFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 168
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 328 bits (807), Expect = 1e-90
Identities = 148/164 (90%), Positives = 157/164 (95%)
Frame = +1
Query: 79 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 258
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 259 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 438
GILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 439 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVCHTVPIY 570
MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV HTVPIY
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 168
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 328 bits (807), Expect = 1e-90
Identities = 148/164 (90%), Positives = 157/164 (95%)
Frame = +1
Query: 79 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 258
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 259 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 438
GILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 439 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVCHTVPIY 570
MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV HTVPIY
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 168
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 328 bits (807), Expect = 1e-90
Identities = 148/164 (90%), Positives = 157/164 (95%)
Frame = +1
Query: 79 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 258
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 259 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 438
GILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 439 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVCHTVPIY 570
MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV HTVPIY
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 168
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 304 bits (746), Expect = 3e-83
Identities = 133/164 (81%), Positives = 153/164 (93%)
Frame = +1
Query: 79 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 258
D+ A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 259 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 438
GIL+LKYPIEHG+++NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMTQI
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQI 125
Query: 439 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVCHTVPIY 570
MFE+F P+MY+ IQAVLSLY+SGRTTGIVLDSGDGV HTVPIY
Sbjct: 126 MFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIY 169
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 243 bits (594), Expect = 8e-65
Identities = 110/159 (69%), Positives = 131/159 (82%)
Frame = +1
Query: 94 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 273
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 274 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 453
K P+EHGI+ NWDDMEKIWH+TFYNELRV PEEHPVLLTEAP NPKANREKMTQIMFE+F
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESF 118
Query: 454 NSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVCHTVPIY 570
+ PAMYV++Q+VL LY+SGRTTG+VLD G+ V HTVP+Y
Sbjct: 119 DVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHTVPVY 157
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 213 bits (520), Expect = 7e-56
Identities = 93/123 (75%), Positives = 111/123 (90%)
Frame = +1
Query: 202 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 381
MVGM + D +VGD+A+++ GILTL YP+EHG+++NWDDMEKIW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 382 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVCHTV 561
LLTEAPLNPKA+REKMTQIMFETF P+MY+ +QA LSL+ASGRTTG VLDSGDGV + V
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIV 120
Query: 562 PIY 570
PIY
Sbjct: 121 PIY 123
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 184 bits (447), Expect = 5e-47
Identities = 81/165 (49%), Positives = 112/165 (67%), Gaps = 2/165 (1%)
Frame = +1
Query: 79 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQS 252
D+ +V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 2 DNKNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSE 61
Query: 253 KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 432
R L + YP+ +GI+ NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM
Sbjct: 62 LRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMI 121
Query: 433 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVCHTVPI 567
+ MFE +N +++ IQAVL+LYA G TG+V+DSGDGV H VP+
Sbjct: 122 ETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPV 166
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 135 bits (327), Expect = 2e-32
Identities = 73/186 (39%), Positives = 109/186 (58%), Gaps = 22/186 (11%)
Frame = +1
Query: 79 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGQKDS-- 228
D+V+A+VVD GS CKAG+AG+DAP+AVFPS++G M +DS
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 229 -----------YVGDEAQS-KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEE 372
YVG +A S +R + + PI+ GI+++WD ++ IW H F + L + P E
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTE 124
Query: 373 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVC 552
HP+LL E PLN + REK ++MFE + PA+++A VL+ +A+GR T +V+D G G
Sbjct: 125 HPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGST 184
Query: 553 HTVPIY 570
P++
Sbjct: 185 TISPVH 190
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 132 bits (318), Expect = 2e-31
Identities = 77/185 (41%), Positives = 106/185 (57%), Gaps = 26/185 (14%)
Frame = +1
Query: 91 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 216
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 217 QKDSYVGDEAQSK-RGILT--LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 387
D Y+GDEA +K R T L YPIEHG + +WD ME+ W +N LR PE+H LL
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLL 124
Query: 388 TEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVC 552
TE+PL P +RE +I+FETFN P +Y+A+ +VL+L A T TG+V+D GDG
Sbjct: 125 TESPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGAT 184
Query: 553 HTVPI 567
H VP+
Sbjct: 185 HVVPV 189
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 104 bits (249), Expect = 5e-23
Identities = 54/132 (40%), Positives = 79/132 (59%), Gaps = 16/132 (12%)
Frame = +1
Query: 79 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------M 213
D+V+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 214 GQKDSYVGDEAQS-KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 390
G++ Y G +A + +R + + P + GI+T+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 391 EAPLNPKANREK 426
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 92.7 bits (220), Expect = 2e-19
Identities = 64/161 (39%), Positives = 83/161 (51%), Gaps = 2/161 (1%)
Frame = +1
Query: 91 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 267
ALVVD GS KAG A D +P + PS + R MV G + D + +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDV 53
Query: 268 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMF 444
TL PIE G+I +WD ME + + Y L E +L T+ PKA RE++ Q+MF
Sbjct: 54 TLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMF 112
Query: 445 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVCHTVPI 567
ETFN Y + QAVLSLYA GR +G +D G G P+
Sbjct: 113 ETFNVSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPV 153
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 82.2 bits (194), Expect = 2e-16
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 11/168 (6%)
Frame = +1
Query: 94 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 273
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD S
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 274 -----KYPIEHGIITNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQ 435
+ P + ++ ++ ME I + F + +HP+L+TE NP +R KM +
Sbjct: 78 TRSGPRSPFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAE 137
Query: 436 IMFETFNSPAMYVAIQAVLS-----LYASGRTTGIVLDSGDGVCHTVP 564
++FET+ PA+ + A S L+ + GIVL G H++P
Sbjct: 138 LLFETYGVPAVAFGVDAAFSYKYNQLHGICKKDGIVLCPGFTTTHSIP 185
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 78.6 bits (185), Expect = 3e-15
Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 10/168 (5%)
Frame = +1
Query: 94 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 273
+V+DNG G+ KAG G+ P V P+ + +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 274 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 453
+ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE F
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDF 121
Query: 454 NSPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVCHTVPI 567
++Y+A Q+++ LY + R +V+D G H VP+
Sbjct: 122 GFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPV 169
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 42.7 bits (96), Expect = 2e-04
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Frame = +1
Query: 337 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NSPAMYVAIQA 486
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 487 VLSLYASGRTTGIVLDSGDGVCHTVPI 567
VL+LYA+ RT+GIV++ G V +PI
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPI 267
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 42.7 bits (96), Expect = 2e-04
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Frame = +1
Query: 337 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NSPAMYVAIQA 486
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 487 VLSLYASGRTTGIVLDSGDGVCHTVPI 567
VL+LYA+ RT+GIV++ G V +PI
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPI 267
>At4g27520.1 68417.m03952 plastocyanin-like domain-containing
protein similar to PIR|JC7196 phytocyanin-related
protein Pn14 {Ipomoea nil}; contains Pfam profile
PF02298: Plastocyanin-like domain
Length = 349
Score = 31.5 bits (68), Expect = 0.41
Identities = 21/61 (34%), Positives = 26/61 (42%)
Frame = +2
Query: 2 PPGCRLP*SQYQRPQHKHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPSWV 181
PPG P P H+ S A + +MAP PVSP T+ PAP S V
Sbjct: 174 PPGSTTP------PGGAHSPKSSSAVSPATSPPGSMAPKSGSPVSPTTSPPAPPKSTSPV 227
Query: 182 A 184
+
Sbjct: 228 S 228
>At2g19780.1 68415.m02311 leucine-rich repeat family protein /
extensin family protein contains leucine rich-repeat
(LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar
to leucine-rich repeat/extensin 1 (GI:13809918)
[Arabidopsis thaliana]; contains similarity to disease
resistance protein [Lycopersicon esculentum]
gi|3894383|gb|AAC78591
Length = 402
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 432 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPD 325
G+ + VG+G+ GG G+ GV +GG G P+
Sbjct: 28 GYSIGVGVGIGGGDGDDGGVWIGGGNPNSNPGSAPN 63
>At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2
(PLDALPHA2) (PLD2) / choline phosphatase 2 identical to
phospholipase D alpha 2 ( PLD alpha 2) SP:Q9SSQ9 from
[Arabidopsis thaliana]
Length = 810
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -1
Query: 444 KHDL-GHLL--PVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLL 319
+HDL GHLL P+G+ EG E G DT+ + GV D +
Sbjct: 760 EHDLPGHLLRYPIGIASEGNITELPGCEFFPDTKARILGVKSDYM 804
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.2
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +1
Query: 238 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 417
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 418 REK 426
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.2
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +1
Query: 238 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 417
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 418 REK 426
REK
Sbjct: 225 REK 227
>At3g04570.1 68416.m00485 DNA-binding protein-related contains Pfam
domain PF03479: Domain of unknown function (DUF296),
found in AT-hook motifs Pfam:PF02178
Length = 315
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = -2
Query: 197 PWWRGRPTMDG--KTARGASSPAKPALHM 117
PWW G+ + G T G+S KP LH+
Sbjct: 4 PWWTGQVNLSGLETTPPGSSQLKKPDLHI 32
>At1g73880.1 68414.m08556 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 473
Score = 27.9 bits (59), Expect = 5.0
Identities = 37/125 (29%), Positives = 50/125 (40%), Gaps = 7/125 (5%)
Frame = -1
Query: 393 FGEQHGVLLGGDTQLIVEGVVPDLLHVI-----PVGDDTVLDGVLQSEDTSLA-LGLVTH 232
FG Q VL T + G+ +H I PV D+ +L D +A GLV
Sbjct: 287 FGSQV-VLTKEQTLALASGLEKSGVHFIWAVKEPVEKDSTRGNILDGFDDRVAGRGLVIR 345
Query: 231 VGV-FLAHTDHHALVARATHDGREDGAGRVVAGETGLAHAGAIVDYKRSNIVVAHLELCV 55
+A H A+ A TH G VVAG L Y +++VV L++ V
Sbjct: 346 GWAPQVAVLRHRAVGAFLTHCGWNSVVEAVVAGVLMLTWPMRADQYTDASLVVDELKVGV 405
Query: 54 CLCWG 40
C G
Sbjct: 406 RACEG 410
>At5g25280.2 68418.m02999 serine-rich protein-related contains some
similarity to serine-rich proteins
Length = 220
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 27 VNTSVPNTNTHKVQDVRRRCCCA 95
V+++ P+ N HK+ D RRRC C+
Sbjct: 108 VSSNKPS-NHHKIPDSRRRCMCS 129
>At5g25280.1 68418.m02998 serine-rich protein-related contains some
similarity to serine-rich proteins
Length = 220
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 27 VNTSVPNTNTHKVQDVRRRCCCA 95
V+++ P+ N HK+ D RRRC C+
Sbjct: 108 VSSNKPS-NHHKIPDSRRRCMCS 129
>At3g15730.1 68416.m01993 phospholipase D alpha 1 / PLD alpha 1
(PLDALPHA1) (PLD1) / choline phosphatase 1 identical to
SP:Q38882 Phospholipase D alpha 1 (EC 3.1.4.4)
(AtPLDalpha1) (PLD alpha 1) (Choline phosphatase 1)
(Phosphatidylcholine-hydrolyzing phospholipase D 1)
(PLDalpha) [Arabidopsis thaliana]
Length = 810
Score = 27.5 bits (58), Expect = 6.7
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 444 KHDL-GHLL--PVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLL 319
+HDL GHLL P+G+ EG E G DT+ + G D L
Sbjct: 760 EHDLPGHLLRYPIGVASEGDITELPGFEFFPDTKARILGTKSDYL 804
>At1g13830.1 68414.m01623 beta-1,3-glucanase-related similar to
beta-1,3-glucanase-like protein (GI:14279169) [Olea
europaea] similar to Glucan endo-1,3-beta-glucosidase
precursor (EC 3.2.1.39) ((1-3)-beta- glucan
endohydrolase) ((1-3)-beta-glucanase) (Beta-1,3-
endoglucanase) (Swiss-Prot:P52409) [Triticum aestivum]
Length = 197
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 101 STMAPACARPVSPATTRPAPSSRP 172
S +A C P SP++TR PS+ P
Sbjct: 98 SNLANGCIYPSSPSSTRSPPSTTP 121
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/80 (22%), Positives = 32/80 (40%)
Frame = +1
Query: 304 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 483
NW +E + + + P LL EA + PK+ E Q +++TF + + +
Sbjct: 494 NWSYIEFVDNKDVLELIEKKPGGVIALLDEACMFPKSTHETFAQKLYQTFKNYKRFTKPK 553
Query: 484 AVLSLYASGRTTGIVLDSGD 543
+ +A G V D
Sbjct: 554 LSRTSFAISHYAGEVTYQAD 573
>At4g26670.1 68417.m03842 mitochondrial import inner membrane
translocase subunit Tim17/Tim22/Tim23 family protein
weak similarity to SP|Q9Z0V8 Mitochondrial import inner
membrane translocase subunit TIM17 A {Mus musculus};
contains Pfam profile PF02466: Mitochondrial import
inner membrane translocase subunit Tim17
Length = 210
Score = 27.1 bits (57), Expect = 8.8
Identities = 23/66 (34%), Positives = 28/66 (42%)
Frame = +1
Query: 76 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
+D ALV +C FAGD A AV SI G G+ G K S+ D QS
Sbjct: 32 NDSSKALVTIPAPAVCLFRFAGDAAGGAVMGSIFG--YGSGLFKKKGFKGSF-ADAGQSA 88
Query: 256 RGILTL 273
+ L
Sbjct: 89 KTFAVL 94
>At3g32904.1 68416.m04164 hypothetical protein
Length = 330
Score = 27.1 bits (57), Expect = 8.8
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 242 SSPT*ESFWPIPTITPWWRGRPTMDGKTARGASSPAKPALHMP 114
+SP+ W IP TP W G P+ + +SSP P L P
Sbjct: 287 NSPSNVPQWTIPPTTPQW-GTPS---SMPQWSSSPTAPQLSSP 325
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 304 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 453
NW +E + + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,233,510
Number of Sequences: 28952
Number of extensions: 261520
Number of successful extensions: 974
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1102220672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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