Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30946
(569 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protei... 202 9e-52
BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a ... 202 9e-52
BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a ... 202 9e-52
BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a ... 202 9e-52
BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a ... 202 9e-52
BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein. 202 9e-52
BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a ... 202 9e-52
BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a ... 202 9e-52
BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a ... 202 9e-52
AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a ... 202 9e-52
AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a ... 200 4e-51
AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA seq... 192 7e-49
BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein. 152 1e-36
AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a ... 150 3e-36
BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for MG... 77 4e-14
BC004907-1|AAH04907.2| 551|Homo sapiens EPS8-like 1 protein. 31 2.9
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein. 30 5.0
>X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protein
protein.
Length = 203
Score = 202 bits (492), Expect = 9e-52
Identities = 90/169 (53%), Positives = 120/169 (71%)
Frame = +3
Query: 15 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHK 194
KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHK
Sbjct: 32 KVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHK 91
Query: 195 TERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRD 374
T+RG+ AL RL+ +DG PPP+D LKP R + ++GRL+HE+GWKY+
Sbjct: 92 TKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQA 151
Query: 375 VVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFTTIIQSYG 521
V LE+KRK KA +K+L R+ K A + V K +T +++++G
Sbjct: 152 VTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 202 bits (492), Expect = 9e-52
Identities = 90/169 (53%), Positives = 120/169 (71%)
Frame = +3
Query: 15 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHK 194
KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHK
Sbjct: 32 KVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHK 91
Query: 195 TERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRD 374
T+RG+ AL RL+ +DG PPP+D LKP R + ++GRL+HE+GWKY+
Sbjct: 92 TKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQA 151
Query: 375 VVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFTTIIQSYG 521
V LE+KRK KA +K+L R+ K A + V K +T +++++G
Sbjct: 152 VTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 202 bits (492), Expect = 9e-52
Identities = 90/169 (53%), Positives = 120/169 (71%)
Frame = +3
Query: 15 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHK 194
KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHK
Sbjct: 32 KVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHK 91
Query: 195 TERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRD 374
T+RG+ AL RL+ +DG PPP+D LKP R + ++GRL+HE+GWKY+
Sbjct: 92 TKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQA 151
Query: 375 VVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFTTIIQSYG 521
V LE+KRK KA +K+L R+ K A + V K +T +++++G
Sbjct: 152 VTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 202 bits (492), Expect = 9e-52
Identities = 90/169 (53%), Positives = 120/169 (71%)
Frame = +3
Query: 15 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHK 194
KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHK
Sbjct: 32 KVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHK 91
Query: 195 TERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRD 374
T+RG+ AL RL+ +DG PPP+D LKP R + ++GRL+HE+GWKY+
Sbjct: 92 TKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQA 151
Query: 375 VVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFTTIIQSYG 521
V LE+KRK KA +K+L R+ K A + V K +T +++++G
Sbjct: 152 VTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 202 bits (492), Expect = 9e-52
Identities = 90/169 (53%), Positives = 120/169 (71%)
Frame = +3
Query: 15 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHK 194
KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHK
Sbjct: 32 KVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHK 91
Query: 195 TERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRD 374
T+RG+ AL RL+ +DG PPP+D LKP R + ++GRL+HE+GWKY+
Sbjct: 92 TKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQA 151
Query: 375 VVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFTTIIQSYG 521
V LE+KRK KA +K+L R+ K A + V K +T +++++G
Sbjct: 152 VTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein.
Length = 201
Score = 202 bits (492), Expect = 9e-52
Identities = 90/169 (53%), Positives = 120/169 (71%)
Frame = +3
Query: 15 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHK 194
KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHK
Sbjct: 30 KVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHK 89
Query: 195 TERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRD 374
T+RG+ AL RL+ +DG PPP+D LKP R + ++GRL+HE+GWKY+
Sbjct: 90 TKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQA 149
Query: 375 VVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFTTIIQSYG 521
V LE+KRK KA +K+L R+ K A + V K +T +++++G
Sbjct: 150 VTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 198
>BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 202 bits (492), Expect = 9e-52
Identities = 90/169 (53%), Positives = 120/169 (71%)
Frame = +3
Query: 15 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHK 194
KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHK
Sbjct: 32 KVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHK 91
Query: 195 TERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRD 374
T+RG+ AL RL+ +DG PPP+D LKP R + ++GRL+HE+GWKY+
Sbjct: 92 TKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQA 151
Query: 375 VVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFTTIIQSYG 521
V LE+KRK KA +K+L R+ K A + V K +T +++++G
Sbjct: 152 VTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 202 bits (492), Expect = 9e-52
Identities = 90/169 (53%), Positives = 120/169 (71%)
Frame = +3
Query: 15 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHK 194
KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHK
Sbjct: 32 KVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHK 91
Query: 195 TERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRD 374
T+RG+ AL RL+ +DG PPP+D LKP R + ++GRL+HE+GWKY+
Sbjct: 92 TKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQA 151
Query: 375 VVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFTTIIQSYG 521
V LE+KRK KA +K+L R+ K A + V K +T +++++G
Sbjct: 152 VTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 202 bits (492), Expect = 9e-52
Identities = 90/169 (53%), Positives = 120/169 (71%)
Frame = +3
Query: 15 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHK 194
KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHK
Sbjct: 32 KVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHK 91
Query: 195 TERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRD 374
T+RG+ AL RL+ +DG PPP+D LKP R + ++GRL+HE+GWKY+
Sbjct: 92 TKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQA 151
Query: 375 VVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFTTIIQSYG 521
V LE+KRK KA +K+L R+ K A + V K +T +++++G
Sbjct: 152 VTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 202 bits (492), Expect = 9e-52
Identities = 90/169 (53%), Positives = 120/169 (71%)
Frame = +3
Query: 15 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHK 194
KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHK
Sbjct: 32 KVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHK 91
Query: 195 TERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRD 374
T+RG+ AL RL+ +DG PPP+D LKP R + ++GRL+HE+GWKY+
Sbjct: 92 TKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQA 151
Query: 375 VVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFTTIIQSYG 521
V LE+KRK KA +K+L R+ K A + V K +T +++++G
Sbjct: 152 VTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a
variant protein.
Length = 203
Score = 200 bits (487), Expect = 4e-51
Identities = 89/169 (52%), Positives = 119/169 (70%)
Frame = +3
Query: 15 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHK 194
KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHK
Sbjct: 32 KVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHK 91
Query: 195 TERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRD 374
T+RG+ AL L+ +DG PPP+D LKP R + ++GRL+HE+GWKY+
Sbjct: 92 TKRGQAALDHLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQA 151
Query: 375 VVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFTTIIQSYG 521
V LE+KRK KA +K+L R+ K A + V K +T +++++G
Sbjct: 152 VTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA
sequence from clone RP11-365K22 on chromosome 13
Contains a novel gene similar to ribosomal protein L13a
(RPL13A). ).
Length = 203
Score = 192 bits (468), Expect = 7e-49
Identities = 86/169 (50%), Positives = 117/169 (69%)
Frame = +3
Query: 15 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHK 194
KVVVV CE INISGNF+RNKL ++FLRKR N +P+RGP+HFRAPS++ W+TVRGM+PHK
Sbjct: 32 KVVVVCCEGINISGNFYRNKLNYLAFLRKRMNTSPSRGPYHFRAPSRVFWRTVRGMLPHK 91
Query: 195 TERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRD 374
T+RG+ AL RL+ DG PPP+D LKP R + ++GRL+HE+GWKY+
Sbjct: 92 TKRGQAALDRLKVSDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQA 151
Query: 375 VVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFTTIIQSYG 521
V LE+KRK KA +K+L R+ K A + V K +T +++++G
Sbjct: 152 VTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein.
Length = 142
Score = 152 bits (368), Expect = 1e-36
Identities = 66/138 (47%), Positives = 92/138 (66%)
Frame = +3
Query: 108 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 287
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Query: 288 XXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAG 467
LKP R + ++GRL+HE+GWKY+ V LEDKRK KA +K+L R+ K A
Sbjct: 62 ALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEDKRKEKAKIHYRKKKQLMRLRKQAE 121
Query: 468 EKVSKATTPFTTIIQSYG 521
+ V K +T +++++G
Sbjct: 122 KNVEKKIDKYTEVLKTHG 139
>AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a
protein.
Length = 142
Score = 150 bits (364), Expect = 3e-36
Identities = 65/138 (47%), Positives = 92/138 (66%)
Frame = +3
Query: 108 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 287
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Query: 288 XXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAG 467
LKP R + ++GRL+HE+GWKY+ V LE+KRK KA +K+L R+ K A
Sbjct: 62 ALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAE 121
Query: 468 EKVSKATTPFTTIIQSYG 521
+ V K +T +++++G
Sbjct: 122 KNVEKKIDKYTEVLKTHG 139
>BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for
MGC:87657) protein.
Length = 102
Score = 77.0 bits (181), Expect = 4e-14
Identities = 39/101 (38%), Positives = 55/101 (54%)
Frame = +3
Query: 180 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 359
M+ HKT+RG +L L+ +DG PPP+D LKP R + +GR + E+
Sbjct: 1 MLRHKTKRGHASLDCLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFALLGRQAQEVR 60
Query: 360 WKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSK 482
WKY+ V LE+KRK KA +K+L R+ K A + V K
Sbjct: 61 WKYQAVTATLEEKRKEKAKIHYWKKKQLMRLRKQAEKNVKK 101
>BC004907-1|AAH04907.2| 551|Homo sapiens EPS8-like 1 protein.
Length = 551
Score = 31.1 bits (67), Expect = 2.9
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 321 NYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLK 446
NY R S E+ K RDV+ LEDK K ++ V ++K K
Sbjct: 500 NYDFQARNSSELSVKQRDVLEVLEDKEKVSELEAVMEKQKKK 541
>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
Length = 1134
Score = 30.3 bits (65), Expect = 5.0
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +3
Query: 387 LEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFTTIIQSYGYN*D*E 539
L+ R+GK KR A +K++ K G+ S A +PF + + SY YN D E
Sbjct: 566 LKSSREGKH-KRAAKTRKMEVGFKARGQPKS-AHSPFASEVSSYSYNTDSE 614
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,401,614
Number of Sequences: 237096
Number of extensions: 1887234
Number of successful extensions: 11154
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 11055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11139
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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