Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30942
         (563 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    26   0.26 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    26   0.26 
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    25   0.59 
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   4.2  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 25.8 bits (54), Expect = 0.26
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
 Frame = +1

Query: 202  KIQTIENE-LDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIPTAGGGPREVRGASR 378
            K    ENE L + QESL  +N K+E  EK +Q  +    A++       G    V+    
Sbjct: 1093 KADNKENEQLRKIQESLRDLNRKIESLEK-MQYPDLRSPAVSNVTTFMEGSKATVKNNVE 1151

Query: 379  DRHRQA 396
            D + +A
Sbjct: 1152 DNYMEA 1157


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 25.8 bits (54), Expect = 0.26
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
 Frame = +1

Query: 202  KIQTIENE-LDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIPTAGGGPREVRGASR 378
            K    ENE L + QESL  +N K+E  EK +Q  +    A++       G    V+    
Sbjct: 1093 KADNKENEQLRKIQESLRDLNRKIESLEK-MQYPDLRSPAVSNVTTFMEGSKATVKNNVE 1151

Query: 379  DRHRQA 396
            D + +A
Sbjct: 1152 DNYMEA 1157


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 24.6 bits (51), Expect = 0.59
 Identities = 20/67 (29%), Positives = 29/67 (43%)
 Frame = +1

Query: 76  KMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQ 255
           KM   K +KD   D+ A+ + + +      EKA+ +   + K   TIEN L     S   
Sbjct: 70  KMVKQKHKKDIRADKKALQKLRRE-----VEKAKRDLSSVHKTTLTIENLLADYDFSETL 124

Query: 256 VNGKLEE 276
              K EE
Sbjct: 125 TRAKFEE 131


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -3

Query: 150 VFGLLLTHGSAVERIV 103
           VFG LLT+ S+VE ++
Sbjct: 9   VFGALLTYVSSVEYLI 24


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,998
Number of Sequences: 336
Number of extensions: 1471
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)