Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30942
(563 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 35 0.002
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 32 0.011
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 32 0.011
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 32 0.015
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 31 0.034
AY846632-1|AAW31598.1| 412|Anopheles gambiae SAGLIN protein. 26 0.98
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 25 1.7
AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative acetyltr... 25 2.3
AY187044-1|AAO39758.1| 87|Anopheles gambiae putative antennal ... 23 5.2
AY263176-1|AAP78791.1| 705|Anopheles gambiae TmcB-like protein ... 23 6.9
AY263175-1|AAP78790.1| 814|Anopheles gambiae TmcA-like protein ... 23 9.1
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 23 9.1
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 34.7 bits (76), Expect = 0.002
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Frame = +1
Query: 73 KKMQAMKLEKDNALDRAA--MCEQQAKDANLRAEKAEEEA--RQLQKKIQTIENELDQTQ 240
KK+Q L + L + A + E + ++ LR E +LQK I+ + +LDQ +
Sbjct: 754 KKLQQELLTNEQQLQQLAGVVFEGETEETTLREELEHSRTILAKLQKGIEEEQAKLDQVR 813
Query: 241 ESLMQVNGKLEEKEKALQNAESEVAALNRRI 333
++ Q + K+ A+ E+E+A + I
Sbjct: 814 RTVQQEEQTAQAKKDAMGAVEAEIARIQASI 844
Score = 30.7 bits (66), Expect = 0.034
Identities = 23/109 (21%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Frame = +1
Query: 40 KNKTTKMDAIKKKMQAMKLEKD-NALDRAAMCEQQAKDANLRAEKAEEEAR--QLQKKIQ 210
+N + ++ I+K A ++E+D +R + + + + + EKA+ + R +L I
Sbjct: 406 RNASERVTRIQK--DARQIEQDLQERNRDGLSQVEQRKQAVETEKAQLKERNDELASMIA 463
Query: 211 TIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIPTAGGGPR 357
+ + E+D ++ V EEK +SE + +++ PR
Sbjct: 464 SAQREVDLMYNTMAHVKDAREEKHHERCAKQSETTRIEKQLEQFESAPR 512
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 32.3 bits (70), Expect = 0.011
Identities = 26/118 (22%), Positives = 53/118 (44%)
Frame = +1
Query: 55 KMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQ 234
K I + + +LEK A DR A +Q+ + + + + + + K + E+++ +
Sbjct: 198 KKRGIAAERKEARLEKQEA-DRYASLKQECSEKQVHFQLFKLYHNEKEAK-RLKEDQISK 255
Query: 235 TQESLMQVNGKLEEKEKALQNAESEVAALNRRIPTAGGGPREVRGASRDRHRQAVRGQ 408
QE L + + EE ++ L+ + EV + R + REV RH ++ +
Sbjct: 256 QQE-LNIIEKRKEEADEVLKEKKKEVGKMTREMAKKEQEIREVEAEMSKRHPMFIKAK 312
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 32.3 bits (70), Expect = 0.011
Identities = 21/84 (25%), Positives = 41/84 (48%)
Frame = +1
Query: 61 DAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQ 240
D +++ +A+ NA D A Q A+D AE+A + A ++K+ +N
Sbjct: 1417 DLLQRAEEALYAASRNAED-ARKNAQTAQDKY--AEEASKLAENIKKRANATKNTARDLH 1473
Query: 241 ESLMQVNGKLEEKEKALQNAESEV 312
Q+NG+L + + L+ E+++
Sbjct: 1474 HEADQLNGRLAKTDNRLEEREAQI 1497
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 31.9 bits (69), Expect = 0.015
Identities = 22/97 (22%), Positives = 40/97 (41%)
Frame = +1
Query: 61 DAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQ 240
+ I+ K++ ++ E+++ ++ +C L QL K ++ E + Q
Sbjct: 201 EEIEPKLEKLRKEREHYIEFQKVCRDIEYLTRLYVSY---RYLQLCKGVEESERTIANLQ 257
Query: 241 ESLMQVNGKLEEKEKALQNAESEVAALNRRIPTAGGG 351
+ + K+E Q E E L RI T GGG
Sbjct: 258 SVIGESEQKIESNCATAQTLEQEAKELQERIDTEGGG 294
Score = 27.1 bits (57), Expect = 0.42
Identities = 23/124 (18%), Positives = 53/124 (42%), Gaps = 18/124 (14%)
Frame = +1
Query: 55 KMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRA-----------EKAEEEARQLQK 201
+++ + KK++ ++ A + C + KD + + AEE+ ++ +K
Sbjct: 742 EIEELNKKIETLQKTIVEARETQTQCSAKVKDLQAKIADGKGHRERELKSAEEDLKRSKK 801
Query: 202 KIQTIENELDQTQESLMQVNGKLEEKEKALQNA-------ESEVAALNRRIPTAGGGPRE 360
K + + ++ + ++EE +K + A E ++AAL +R+ G E
Sbjct: 802 KSEESRKNWKKHEQDFETLKLEIEELQKGIVTAKEQAVKLEEQIAALQQRLVEVSGTTDE 861
Query: 361 VRGA 372
+ A
Sbjct: 862 MTAA 865
Score = 25.4 bits (53), Expect = 1.3
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +1
Query: 73 KKMQAMKLEKDNALDRAAMC-----EQQAKDANLRAEKAEEEARQLQKKIQTIENELDQT 237
KK+Q K + +++ AM E+Q K+ R + E++ +KKIQ I +LD+
Sbjct: 968 KKLQDSKDKMSRNVNQKAMVLLEREEEQYKEVMRRKKVVEDD----KKKIQAIITDLDEE 1023
Query: 238 QESLMQV 258
++ ++V
Sbjct: 1024 KKKKLKV 1030
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 30.7 bits (66), Expect = 0.034
Identities = 17/94 (18%), Positives = 41/94 (43%)
Frame = +1
Query: 52 TKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELD 231
TK++ + K++ + E+ + + + E+E Q I+ +E
Sbjct: 900 TKINGLGKQIDKLSANISKLTVEIKTSERNVQKSKDKINSMEDEVEAAQSAIRKGNDERT 959
Query: 232 QTQESLMQVNGKLEEKEKALQNAESEVAALNRRI 333
Q +E ++ +LEE + A++ A +++ + I
Sbjct: 960 QLEEEANKLREELEEMKLAIEKAHEGSSSIKKEI 993
Score = 29.9 bits (64), Expect = 0.060
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 181 EARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALN 324
E ++K+Q NE + ++L V GKL+E A+Q+ S+ L+
Sbjct: 542 ELETAKQKLQENANEERELTQTLRAVQGKLQESMAAMQSTRSQGKVLD 589
Score = 29.1 bits (62), Expect = 0.10
Identities = 12/61 (19%), Positives = 37/61 (60%)
Frame = +1
Query: 67 IKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQES 246
++++++ MKL + A + ++ +++ R + + + + ++ +QTIE +L +T+++
Sbjct: 968 LREELEEMKLAIEKAHEGSSSIKKEIVALQKREAEGKMKRLEFEQILQTIETKLQETKDT 1027
Query: 247 L 249
L
Sbjct: 1028 L 1028
>AY846632-1|AAW31598.1| 412|Anopheles gambiae SAGLIN protein.
Length = 412
Score = 25.8 bits (54), Expect = 0.98
Identities = 14/57 (24%), Positives = 28/57 (49%)
Frame = +1
Query: 121 AAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKAL 291
AA E+Q A ++ +E + LQK++ + + + L+ N + E ++AL
Sbjct: 116 AATLEEQLHAAQQETQQEQEMKKALQKQLDALTDSRNALYIDLLLANIAIGETKQAL 172
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
phosphoprotein protein.
Length = 1200
Score = 25.0 bits (52), Expect = 1.7
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3
Query: 174 RRRGETASEEDPDN*KRARPDTGVSHAG*RKARREGEGS 290
R+R + EED D +R S +G R R G GS
Sbjct: 1047 RKRRIASDEEDSDGSQRRSRSRSRSGSGSRSRSRSGSGS 1085
Score = 24.2 bits (50), Expect = 3.0
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 136 QQAKDANLRAEKAEEEARQLQKKIQTIENE 225
QQA+ RA K +EE R L++K Q +E E
Sbjct: 821 QQAQYHVSRARKIDEEERSLRQK-QELERE 849
>AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative
acetyltransferase protein.
Length = 471
Score = 24.6 bits (51), Expect = 2.3
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -1
Query: 467 PPTTCSRAPYVRARIHRRPGWPRTAWRWRSRDAPRT 360
PP S PY+ IHR P R + + PR+
Sbjct: 230 PPPPTSNEPYLVVPIHRHPELKEQCVRLINTEWPRS 265
>AY187044-1|AAO39758.1| 87|Anopheles gambiae putative antennal
carrier protein AP-2 protein.
Length = 87
Score = 23.4 bits (48), Expect = 5.2
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = +1
Query: 46 KTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAE----KAEEEARQLQKKI 207
K DA K L LD+ A+ KDA + E KA+++A ++ KK+
Sbjct: 24 KDAAKDATDKVKDKAALPDAPKLDKDAVTTPDPKDAAKKVEDAAGKAKDQAAEVGKKL 81
>AY263176-1|AAP78791.1| 705|Anopheles gambiae TmcB-like protein
protein.
Length = 705
Score = 23.0 bits (47), Expect = 6.9
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -3
Query: 156 VGVFGLLLTHGSAVERI 106
V +FG+LLTHG + ++
Sbjct: 527 VSLFGVLLTHGYLIMQV 543
>AY263175-1|AAP78790.1| 814|Anopheles gambiae TmcA-like protein
protein.
Length = 814
Score = 22.6 bits (46), Expect = 9.1
Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = +1
Query: 196 QKKIQ-TIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIPTAGGGPREVRGA 372
Q ++Q T +N D S + +KALQ S L AGGG + +
Sbjct: 742 QLRLQSTTDNATDSENSSSKRKELLQRMMKKALQKENSLTTELESTAAAAGGGLQSLTAE 801
Query: 373 S 375
S
Sbjct: 802 S 802
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 22.6 bits (46), Expect = 9.1
Identities = 12/54 (22%), Positives = 24/54 (44%)
Frame = +1
Query: 220 NELDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIPTAGGGPREVRGASRD 381
N + + + +V +L +++ N ++ +AAL R GP + S D
Sbjct: 1003 NSIQEAARKITKVLQQLWREDELQLNLQAHLAALPTRAAAVDAGPLDGEQVSVD 1056
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 435,644
Number of Sequences: 2352
Number of extensions: 7811
Number of successful extensions: 28
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52983882
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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