Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30941
         (595 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q08738 Cluster: Larval cuticle protein LCP-30 precursor...   276   2e-73
UniRef50_UPI0000D56367 Cluster: PREDICTED: similar to CG30042-PA...    49   7e-05
UniRef50_Q290D6 Cluster: GA15599-PA; n=1; Drosophila pseudoobscu...    39   0.077
UniRef50_Q7PK07 Cluster: ENSANGP00000023169; n=1; Anopheles gamb...    37   0.31 
UniRef50_A1Z8Y3 Cluster: CG30042-PA; n=4; Diptera|Rep: CG30042-P...    37   0.41 
UniRef50_UPI0000D56366 Cluster: PREDICTED: similar to CG30042-PA...    34   2.2  

>UniRef50_Q08738 Cluster: Larval cuticle protein LCP-30 precursor;
           n=1; Bombyx mori|Rep: Larval cuticle protein LCP-30
           precursor - Bombyx mori (Silk moth)
          Length = 239

 Score =  276 bits (677), Expect = 2e-73
 Identities = 136/184 (73%), Positives = 136/184 (73%)
 Frame = +1

Query: 13  MRVFLAICLSLTVALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGR 192
           MRVFLAICLSLTVALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGR
Sbjct: 1   MRVFLAICLSLTVALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGR 60

Query: 193 YIPDNSGAYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEDLSKYLGDAYKGSSIXXXX 372
           YIPDNSGAYN                             KEDLSKYLGDAYKGSSI    
Sbjct: 61  YIPDNSGAYNGDRGDRGAAGGFYTGSGTAGGPGGAYVGTKEDLSKYLGDAYKGSSIVPLP 120

Query: 373 XXXXXXXXXXXXXXXASKVVTPTYVASKVVPPSGAGYDYKYGIIRYDNDVAPEGYHYLYE 552
                          ASKVVTPTYVASKVVPPSGAGYDYKYGIIRYDNDVAPEGYHYLYE
Sbjct: 121 VVKPTIPVPVTPTYVASKVVTPTYVASKVVPPSGAGYDYKYGIIRYDNDVAPEGYHYLYE 180

Query: 553 TENK 564
           TENK
Sbjct: 181 TENK 184


>UniRef50_UPI0000D56367 Cluster: PREDICTED: similar to CG30042-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG30042-PA - Tribolium castaneum
          Length = 275

 Score = 49.2 bits (112), Expect = 7e-05
 Identities = 25/43 (58%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
 Frame = +1

Query: 442 YVASKVVPPSGAGY--DYKYGIIRYDNDVAPEGYHYLYETENK 564
           YVA+ V   SGAGY  +  Y IIR +  V P+GYHY+YETENK
Sbjct: 158 YVATPV-QGSGAGYYDNRNYAIIRKEEQVEPDGYHYVYETENK 199


>UniRef50_Q290D6 Cluster: GA15599-PA; n=1; Drosophila
           pseudoobscura|Rep: GA15599-PA - Drosophila pseudoobscura
           (Fruit fly)
          Length = 264

 Score = 39.1 bits (87), Expect = 0.077
 Identities = 15/23 (65%), Positives = 19/23 (82%)
 Frame = +1

Query: 493 YGIIRYDNDVAPEGYHYLYETEN 561
           + IIR ++DV  +GYHYLYETEN
Sbjct: 164 WAIIRLEDDVEQDGYHYLYETEN 186


>UniRef50_Q7PK07 Cluster: ENSANGP00000023169; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000023169 - Anopheles gambiae
           str. PEST
          Length = 232

 Score = 37.1 bits (82), Expect = 0.31
 Identities = 19/45 (42%), Positives = 25/45 (55%)
 Frame = +1

Query: 427 VVTPTYVASKVVPPSGAGYDYKYGIIRYDNDVAPEGYHYLYETEN 561
           V T   +A   V P  A     + IIR +N V  +GYHY++ETEN
Sbjct: 151 VPTLARIAQVKVAPKPAYAPDGWKIIRLENQVENDGYHYVFETEN 195


>UniRef50_A1Z8Y3 Cluster: CG30042-PA; n=4; Diptera|Rep: CG30042-PA -
           Drosophila melanogaster (Fruit fly)
          Length = 259

 Score = 36.7 bits (81), Expect = 0.41
 Identities = 14/23 (60%), Positives = 19/23 (82%)
 Frame = +1

Query: 493 YGIIRYDNDVAPEGYHYLYETEN 561
           + IIR ++DV  +GYHYL+ETEN
Sbjct: 159 WAIIRQEDDVEVDGYHYLWETEN 181


>UniRef50_UPI0000D56366 Cluster: PREDICTED: similar to CG30042-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG30042-PA - Tribolium castaneum
          Length = 210

 Score = 34.3 bits (75), Expect = 2.2
 Identities = 15/25 (60%), Positives = 18/25 (72%)
 Frame = +1

Query: 490 KYGIIRYDNDVAPEGYHYLYETENK 564
           K+ IIR   DV  +GYH+ YETENK
Sbjct: 110 KWKIIRQLGDVDTDGYHWEYETENK 134


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 491,893,848
Number of Sequences: 1657284
Number of extensions: 8339267
Number of successful extensions: 26061
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25993
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)