Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30938
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    25   0.79 
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   3.2  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   7.4  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   7.4  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   7.4  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   9.7  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   9.7  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   9.7  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   9.7  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = +3

Query: 498 EDITTRHIFSYKILSCDE--CAMAGTLKDRSPGL 593
           E+  TRH+   +I+ CD+    +AG + +   GL
Sbjct: 250 EEYVTRHLIDGRIIGCDQRISFIAGYMTEEVSGL 283


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 13/65 (20%), Positives = 31/65 (47%)
 Frame = -3

Query: 456 AVIVFRVHAVLCDFSDFTVVKLLT*CKKRVCELSAKHETVFVLVIQLQTFQEIFIRSLVF 277
           +++   +  ++  FS +TV+  +   +++ C+L +K      LV    TF      +L +
Sbjct: 63  SIVAMVMGTIVNAFSCYTVLAPVLCKRQQYCQLMSKLLGNHQLVYNCHTFGRFLAPNLTY 122

Query: 276 VFLCL 262
           + + L
Sbjct: 123 LLVAL 127



 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/40 (22%), Positives = 21/40 (52%)
 Frame = -3

Query: 438 VHAVLCDFSDFTVVKLLT*CKKRVCELSAKHETVFVLVIQ 319
           ++ VL ++ DF+     +  K  + ++     T F+++IQ
Sbjct: 303 INVVLNNYPDFSAAGFFSINKTTLLQIIGNVTTFFIIIIQ 342


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 138 PWRSPESAQLKPHTGNH 188
           PW +    Q+K  +GNH
Sbjct: 141 PWFAEHMGQIKVASGNH 157


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 595 GTGAGSARGGLSSFRWRPQPARAP 666
           G G+G+    + +   RP PAR+P
Sbjct: 100 GAGSGNLSPQIQTQVARPPPARSP 123


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 595 GTGAGSARGGLSSFRWRPQPARAP 666
           G G+G+    + +   RP PAR+P
Sbjct: 100 GAGSGNLSPQIQTQVARPPPARSP 123


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 412 AEVTKDCMDPEDDDGMIPY 468
           A+ T +C DPED  G   Y
Sbjct: 205 ADGTGNCEDPEDVPGCEDY 223


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 412 AEVTKDCMDPEDDDGMIPY 468
           A+ T +C DPED  G   Y
Sbjct: 205 ADGTGNCEDPEDVPGCEDY 223


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 15/60 (25%), Positives = 30/60 (50%)
 Frame = -3

Query: 447 VFRVHAVLCDFSDFTVVKLLT*CKKRVCELSAKHETVFVLVIQLQTFQEIFIRSLVFVFL 268
           +F   A+ CDF    VV ++   +KR   ++ K   + ++V     F  ++  +++FV L
Sbjct: 74  IFFFFAICCDFIALIVVNIVHVFRKR--RVNYKDSNIGLVV--ANAFFLLWTPAVIFVVL 129


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -3

Query: 405 TVVKLLT*CKKRVCELSAKHETVFVLVIQLQTFQEIF 295
           T  K L   K+ V  L      +F+L   + TF +IF
Sbjct: 80  TKAKNLLYSKQIVTILKKTKSNIFILKESVDTFNDIF 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,627
Number of Sequences: 336
Number of extensions: 2780
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)