Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30933
         (780 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g35794.1 68418.m04297 hypothetical protein contains Pfam prof...    31   1.1  
At3g29710.1 68416.m03745 hypothetical protein contains Pfam prof...    29   2.6  
At2g04330.1 68415.m00429 hypothetical protein contains Pfam prof...    28   6.0  
At1g11680.1 68414.m01341 obtusifoliol 14-demethylase (CYP51) ide...    28   6.0  
At5g34970.1 68418.m04127 hypothetical protein similar to At5g368...    28   8.0  

>At5g35794.1 68418.m04297 hypothetical protein contains Pfam profile
           PF03384: Drosophila protein of unknown function, DUF287
          Length = 662

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +1

Query: 604 PARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLTKTVFVADGAHIP 750
           PA++   A  T A+ +  +  T APT +PT  + +L  + F     HIP
Sbjct: 42  PAQTTATAMATNAAPTTAAPTTTAPTTAPTTESPMLDDSTFYDALKHIP 90


>At3g29710.1 68416.m03745 hypothetical protein contains Pfam profile
           PF03384: Drosophila protein of unknown function, DUF287
          Length = 669

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +1

Query: 598 KKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLTKTVFVADGAHIP 750
           + P ++   A  T A+ +  +  T APT +PT  + +L  + F     HIP
Sbjct: 71  QSPTQTTATAMATNAAPTTAAPTTTAPTTAPTTESPMLDDSTFYDALKHIP 121


>At2g04330.1 68415.m00429 hypothetical protein contains Pfam profile
           PF03384: Drosophila protein of unknown function, DUF287
          Length = 564

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
 Frame = +1

Query: 553 KATTTCTRPRTRFSLKKPARSRTLAPK--TKASRSRDSTNTLAPTVSPTE*TTLLTKTVF 726
           K      + + +   K  A ++T+A    T A+ +  +  T APT +PT  + +L  + F
Sbjct: 53  KVQAPAKKAKVQAPAKTTATAQTIATAMATNAAPTTAALTTTAPTTAPTTESPMLDDSTF 112

Query: 727 VADGAHIP 750
                HIP
Sbjct: 113 YDALKHIP 120


>At1g11680.1 68414.m01341 obtusifoliol 14-demethylase (CYP51)
           identical to obtusifoliol 14-demethylase (GI:14624983)
           [Arabidopsis thaliana]
          Length = 488

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/57 (26%), Positives = 24/57 (42%)
 Frame = +3

Query: 75  ALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAYN 245
           ++ A  GK        + +T   F  +      DP  YDP R + GR     +GA++
Sbjct: 366 SVTARDGKTYDIPKGHIVATSPAFANRLPHIFKDPDTYDPERFSPGREEDKAAGAFS 422


>At5g34970.1 68418.m04127 hypothetical protein similar to At5g36850,
           At1g27780, At2g05560, At3g42730, At1g52020, At2g14770,
           At3g43390, At3g24390, At1g34740, At1g25886, At4g03300,
           At4g05280
          Length = 478

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +1

Query: 577 PRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTL 708
           PR +   +K  R   ++P+ K S ++ +    +P+V+PTE  T+
Sbjct: 11  PRKQHGQRKEKRVLRVSPRRKRSATKATEELGSPSVAPTEDLTV 54


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,968,480
Number of Sequences: 28952
Number of extensions: 257944
Number of successful extensions: 862
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1746037600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)