Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30932
(541 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 40 3e-04
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 39 4e-04
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 36 0.003
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 33 0.020
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 33 0.036
SPAC222.15 |meu13|SPAC821.01|Tat binding protein 1|Schizosacchar... 32 0.062
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 32 0.062
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 29 0.33
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 29 0.44
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 29 0.44
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 28 1.0
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 28 1.0
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 28 1.0
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 27 1.3
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 27 1.3
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 27 1.3
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 27 1.8
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 1.8
SPAC4F10.09c |||ribosome biogenesis protein Noc1 |Schizosaccharo... 27 1.8
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 1.8
SPAC29A4.09 |||rRNA processing protein Rrp17|Schizosaccharomyces... 27 1.8
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 27 2.3
SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyce... 27 2.3
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 27 2.3
SPBC29A3.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 27 2.3
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 26 3.1
SPAC1486.09 |||ribosome biogenesis protein Nob1 |Schizosaccharom... 26 3.1
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 3.1
SPCC569.01c |||DUF1773 family protein 5|Schizosaccharomyces pomb... 26 4.1
SPCP20C8.01c |||B13958 domain|Schizosaccharomyces pombe|chr 3|||... 26 4.1
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 4.1
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 25 5.4
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 25 5.4
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 25 5.4
SPAC9.11 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Ma... 25 5.4
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 25 7.2
SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit |Sch... 25 7.2
SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 25 7.2
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 25 7.2
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 25 7.2
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 25 7.2
SPCC1672.02c |sap1||switch-activating protein Sap1|Schizosacchar... 25 9.5
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 25 9.5
SPBC14F5.08 |med7||mediator complex subunit Med7|Schizosaccharom... 25 9.5
SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 9.5
SPCC569.03 |||DUF1773 family protein 4|Schizosaccharomyces pombe... 25 9.5
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 25 9.5
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 39.5 bits (88), Expect = 3e-04
Identities = 20/82 (24%), Positives = 45/82 (54%)
Frame = +2
Query: 233 LEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKVL 412
L+ + + TEAE L+RKV+ +EE+LE +++ +K+ + A+ R + L
Sbjct: 69 LKADNEDIQKTEAE--QLSRKVELLEEELETNDKLLRETTEKMRQTDVKAEHFERRVQSL 126
Query: 413 ENRAQQDEERMDQLTNQLKEAR 478
E E++++++T++ + +
Sbjct: 127 ERERDDMEQKLEEMTDKYTKVK 148
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 39.1 bits (87), Expect = 4e-04
Identities = 28/103 (27%), Positives = 48/103 (46%)
Frame = +2
Query: 233 LEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKVL 412
LEE K L + +V +L + +Q ++EDL KSEE + LEA+ + + +
Sbjct: 670 LEESNKSLIKKQEDVDSLEKNIQTLKEDLRKSEE---ALRFSKLEAKNLREVIDNLKGKH 726
Query: 413 ENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVE 541
E Q + L++ +L+ + S++V R A VE
Sbjct: 727 ETLEAQRNDLHSSLSDAKNTNAILSSELTKSSEDVKRLTANVE 769
Score = 30.3 bits (65), Expect = 0.19
Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +2
Query: 239 EKEKQLTATEAEVAALNRKVQQIEEDLEKSE-ERSGTAQQKLLEAQQSADENNRMCKVLE 415
EKE ++ + +A L Q+E +L +S+ + + T ++ L + RM L+
Sbjct: 1570 EKESEILQFNSRLADLEYHKSQVESELGRSKLKLASTTEELQLAENERLSLTTRMLD-LQ 1628
Query: 416 NRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVE 541
N+ + D L+ L+ R L + E K VE
Sbjct: 1629 NQVKDLSNIKDSLSEDLRTLRSLEDSVASLQKECKIKSNTVE 1670
Score = 27.1 bits (57), Expect = 1.8
Identities = 18/87 (20%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Frame = +2
Query: 230 DLEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKV 409
D+E + +++ E E AL +++ +DL+ + E + Q ++ + + D+ V
Sbjct: 991 DIEHLKNKVSEVEVERNALLASNERLMDDLKNNGENIASLQTEIEKKRAENDDLQSKLSV 1050
Query: 410 LENR-------AQQDEERMDQLTNQLK 469
+ + + Q + ++ TNQLK
Sbjct: 1051 VSSEYENLLLISSQTNKSLEDKTNQLK 1077
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 36.3 bits (80), Expect = 0.003
Identities = 20/94 (21%), Positives = 51/94 (54%)
Frame = +2
Query: 230 DLEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKV 409
+L K K+LT+ AE A+ ++++ +++ + +E + + +++ + Q +
Sbjct: 1438 ELTNKNKELTSKNAENEAMQKEIESLKDSNHQLQESASSDAEQITKEQ---------FEQ 1488
Query: 410 LENRAQQDEERMDQLTNQLKEARLLAEDADGKSD 511
L++ ++ E+ + N+L+ + A DADGK++
Sbjct: 1489 LKSEKERTEKELADSKNELEHLQSEAVDADGKTE 1522
Score = 28.7 bits (61), Expect = 0.58
Identities = 22/105 (20%), Positives = 50/105 (47%), Gaps = 7/105 (6%)
Frame = +2
Query: 236 EEKEKQLTATEAEVAALNRKVQQIEEDLEKS-EERSG-----TAQQKLLEAQQSADENNR 397
E +E+ L + L + ++++ + L S +ER +KLL+ + +
Sbjct: 596 EIQEETLIKANETIDQLTKMLEEVSDQLRYSLKERDFFRSLVQENEKLLDMAPATPNSKL 655
Query: 398 MCKVLENRA-QQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKL 529
++E + Q+ R++QLTN+L+ + ++ + + K +E L
Sbjct: 656 NTNLIEQTSYQRSLIRLEQLTNELESLKSISRNKEKKFEEAISSL 700
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 33.5 bits (73), Expect = 0.020
Identities = 24/103 (23%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Frame = +2
Query: 236 EEKEKQ-LTATEAEVAALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKVL 412
E+ EK+ L E+E A + +I++++E T+ Q+ E ++ + + +
Sbjct: 105 EKPEKEDLAVIESEDKAA-KPDGEIKKNVETEVTSRSTSSQEKDELEKQVKTLHDLNEQK 163
Query: 413 ENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVE 541
+ + ++ +ER++ LT + + A+D++GK VS++ A +E
Sbjct: 164 DKKIKELKERINDLTYDYETLKANADDSEGKQTLVSKREAALE 206
Score = 30.7 bits (66), Expect = 0.14
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +2
Query: 233 LEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSADEN-NRMCKV 409
LEE + +L E E+ K+ E+DL+K E+ K+ E ++S +E ++ +
Sbjct: 205 LEEFQSKLLIRENEINKRELKMNGKEDDLKKREKDLENRLLKVEEHEKSLNERATKLSEA 264
Query: 410 LE---NRAQQDEERMDQLTNQLKE 472
E NR ++ EER Q KE
Sbjct: 265 NENFNNRFKEFEEREKSAIKQNKE 288
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 32.7 bits (71), Expect = 0.036
Identities = 31/149 (20%), Positives = 62/149 (41%)
Frame = +2
Query: 86 PTPANSRLETPTSVLRR*TRKSANXXXXXXXXXXXXXXXXXXXXXXXXDLEEKEKQLTAT 265
P+ NSR ETPT+ + + + A+ EEK + L A
Sbjct: 500 PSETNSRAETPTAAPPQISEEEASQRKDAIKLAIQQRIQEKAEAEAKRKAEEKAR-LEAE 558
Query: 266 EAEVAALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERM 445
E + ++ E+ K E ++ +A++ A+EN + + E +A+++ E
Sbjct: 559 ENAKREAEEQAKREAEEKAKREAEEKAKREAEEKAKREAEENAK--REAEEKAKREAEEK 616
Query: 446 DQLTNQLKEARLLAEDADGKSDEVSRKLA 532
+ + K R E A +++E +++ A
Sbjct: 617 AKREAEEKAKREAEEKAKREAEEKAKREA 645
>SPAC222.15 |meu13|SPAC821.01|Tat binding protein
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 216
Score = 31.9 bits (69), Expect = 0.062
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Frame = +2
Query: 245 EKQLTATEAEVAALNRKVQQIEEDLEKSEE-----RSGTAQQKLLEAQQSADENNRMCKV 409
E Q A + K+Q I++++E++ R+GT +Q EA Q D+N K
Sbjct: 116 ELQALNNSLSPAEIREKIQSIDKEIEETSSKLESLRNGTVKQISKEAMQKTDKNYDFAKK 175
Query: 410 -LENRAQQDEERMDQLTNQLKEARLLAE 490
NR + + +T+ L+ + L E
Sbjct: 176 GFSNRKKMFYDLWHLITDSLENPKQLWE 203
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 31.9 bits (69), Expect = 0.062
Identities = 25/83 (30%), Positives = 49/83 (59%)
Frame = +2
Query: 230 DLEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKV 409
D+ +KQ++ EA AA + +++I+ +++ R T +Q LEAQ S ++++ K
Sbjct: 1967 DVRMLQKQISDLEASFAASD--IERIK-GIDECRNRDRTIRQ--LEAQISKFDDDK--KR 2019
Query: 410 LENRAQQDEERMDQLTNQLKEAR 478
+++ + EER QL NQL++ +
Sbjct: 2020 IQSSVSRLEERNAQLRNQLEDVQ 2042
Score = 24.6 bits (51), Expect = 9.5
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +2
Query: 299 QQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQL 466
+++ +L ++ER L E Q A E + + + +R + ER+ L NQ+
Sbjct: 856 KEVANELTITKERVLQLTNDLQEEQALAHEKDILVERANSRVEVVHERLSSLENQV 911
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 29.5 bits (63), Expect = 0.33
Identities = 19/87 (21%), Positives = 39/87 (44%)
Frame = +2
Query: 233 LEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKVL 412
L E++L T+ +++Q+E+D+ KS E ++KLLE L
Sbjct: 856 LANNEQKLKLTKLNFQV--NELEQLEKDINKSSEDCDLQKKKLLEVSSKQGSQAPFLNEL 913
Query: 413 ENRAQQDEERMDQLTNQLKEARLLAED 493
E+ ++ E + ++ + + L A +
Sbjct: 914 ESEYEKLEADIQEMAQKSRTEILEANE 940
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 29.1 bits (62), Expect = 0.44
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +2
Query: 272 EVAALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSAD-ENNRMCKVLENRAQQDEERMD 448
E L +++Q +EE+ K++E S + LLE + + E + + K E Q +
Sbjct: 621 EFDELQKRLQTLEEENNKAKEDSTSKTSNLLEQLKMTEAEVDSLRKENEENKQVIALKES 680
Query: 449 QLTNQLKEARLLAEDADGKSDEVSR 523
+L LL E + +D++S+
Sbjct: 681 ELVKSNDNKLLLNEQIESLNDQLSQ 705
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 29.1 bits (62), Expect = 0.44
Identities = 19/74 (25%), Positives = 37/74 (50%)
Frame = +2
Query: 233 LEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKVL 412
L+ KEK++ AL+ K+Q+ +++ K EE A+ K E+ + ++ K L
Sbjct: 136 LDVKEKKMENRRLVFDALSTKIQKAKKEESKLEEDLRNARAKYEESLEEFEDRMVQLKEL 195
Query: 413 ENRAQQDEERMDQL 454
E ++ R+ Q+
Sbjct: 196 EPDRVENVVRLLQM 209
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 27.9 bits (59), Expect = 1.0
Identities = 15/66 (22%), Positives = 33/66 (50%)
Frame = +2
Query: 284 LNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQ 463
L + +Q + LEK E Q+KL Q +E+ + + ENR ++++E+ + +
Sbjct: 98 LRERERQFYDSLEKKENERDRLQEKLRALQ---EESANLRRQRENRLREEQEQSKRRKQE 154
Query: 464 LKEARL 481
+++
Sbjct: 155 TPSSKI 160
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 27.9 bits (59), Expect = 1.0
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 100 QQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKG 231
++ R A A+ E+ +E QK Q E+D + +KN++++ KG
Sbjct: 259 RRRRSAQNSAKLEKEKAKEKQKDKDQ-EQDTVSDKNQIDEIEKG 301
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 27.9 bits (59), Expect = 1.0
Identities = 22/84 (26%), Positives = 41/84 (48%)
Frame = +2
Query: 275 VAALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQL 454
+ A++ + Q+ E +EK + + + +L D + +++ R + +ER+D L
Sbjct: 173 LVAVSAEKTQLSEKVEKMKRSTDLGAEAVLPLDFQ-DLRVALLSLVDERNEM-QERLDIL 230
Query: 455 TNQLKEARLLAEDADGKSDEVSRK 526
TN L E LL E K DE ++
Sbjct: 231 TNLLDELTLLYE--TDKFDETMKE 252
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 27.5 bits (58), Expect = 1.3
Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Frame = +2
Query: 236 EEKEKQLTATEAEVAALNRKV----QQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMC 403
E E++ + E+EV +K + E D E SEE T ++ E ++ +
Sbjct: 54 ESSEEESESEESEVEVPKKKAVAASEDSESDSESSEEEEETESEEDSEVSDESESESESE 113
Query: 404 KVLENRAQQDEE 439
E ++ +EE
Sbjct: 114 SESEEESESEEE 125
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 27.5 bits (58), Expect = 1.3
Identities = 17/81 (20%), Positives = 34/81 (41%)
Frame = +2
Query: 230 DLEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKV 409
+L EK ++ +E L K+ E+DL ++ + ++ E N CK
Sbjct: 923 ELLEKTSKVETLLSEQNELKEKLSLEEKDLLDTKGELESLRENNATVLSEKAEFNEQCKS 982
Query: 410 LENRAQQDEERMDQLTNQLKE 472
L+ + +D+LT + +
Sbjct: 983 LQETIVTKDAELDKLTKYISD 1003
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 27.5 bits (58), Expect = 1.3
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 233 LEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQS 379
+ +KE ++T+ E L+ ++QQ+ +LEK E + A L+ +S
Sbjct: 743 ISQKEVEITSLRNEKDRLSTRLQQVLLELEKQHETNEEAMDIDLKVPES 791
>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
Brl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 692
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/68 (20%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LTATEAEVAALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQS-ADENNRMCKVLENRAQQ 430
L++ E ++ ++NR + + ED++ + Q+ +++ + + E ++ K LE+ Q
Sbjct: 300 LSSNEEKIESINRDLSSLFEDIQFFISQRTKRQKDIIDLKLACVKEKQQLIKTLESSLTQ 359
Query: 431 DEERMDQL 454
D L
Sbjct: 360 IRNERDSL 367
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 27.1 bits (57), Expect = 1.8
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 10/79 (12%)
Frame = +2
Query: 245 EKQLTATEAEVAALNRKVQQIEEDLEKS-EER--SGTAQQKLLEAQQSADE----NNR-- 397
E + + +E E L+ +V I EDL S E+ ++ LLE +Q ++E NN
Sbjct: 3971 ENENSDSEEENQDLDEEVNDIPEDLSNSLNEKLWDEPNEEDLLETEQKSNEQSAANNESD 4030
Query: 398 -MCKVLENRAQQDEERMDQ 451
+ K +N+A +D++R ++
Sbjct: 4031 LVSKEDDNKALEDKDRQEK 4049
>SPAC4F10.09c |||ribosome biogenesis protein Noc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 860
Score = 27.1 bits (57), Expect = 1.8
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Frame = +2
Query: 239 EKEKQLTATEAEVAALNRKVQQIEEDLEKSEERSGTAQQKLLE----AQQSADENNRMCK 406
++E ++ E A ++ K Q+E D E+S+ S + + + ++QSADEN+
Sbjct: 716 DEEGEIDEDEVWKALVDSK-PQLEMDEEESDFDSEEMDKAMTDMGSDSEQSADENDNESM 774
Query: 407 VLENRAQ-QDEERMDQLTNQLKE 472
E + DEE + ++ + E
Sbjct: 775 ASEEKPMFSDEENLSEIAHSEDE 797
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.1 bits (57), Expect = 1.8
Identities = 16/76 (21%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +2
Query: 272 EVAALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSA-DENNRMCKVLENRAQQDEERMD 448
++ +++ +++E++ E Q+ L + Q E + K LEN Q + D
Sbjct: 637 KMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAIRKELENSKYQQQLSTD 696
Query: 449 QLTNQLKEARLLAEDA 496
+LTN + ++A
Sbjct: 697 RLTNANNDVEAFKKEA 712
Score = 26.2 bits (55), Expect = 3.1
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Frame = +2
Query: 284 LNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTN- 460
++ + +++ LEKS + + L+ +QS E+NR K+L+N+ Q E ++ +L
Sbjct: 831 MSNDLHSLQKSLEKSGIEYSSRIKTLMLEKQSLSEDNR--KLLDNQ-QMMEIKLQELNGV 887
Query: 461 -QLKEAR---LLAEDADGKSDEVSRKLAFVE 541
+L++ R L A+ K+ S + A +E
Sbjct: 888 IELEKQRFSTLEAKFTQQKNTSYSEREALLE 918
>SPAC29A4.09 |||rRNA processing protein Rrp17|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 27.1 bits (57), Expect = 1.8
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +2
Query: 230 DLEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMC-- 403
D E++++ LT RK Q++ + +K EER A +K L Q+ + R+
Sbjct: 30 DKEKRKEYLTGFHKRKVE-RRKHAQVQLEQQKREER--LALRKSLREQRKRELAERLAFS 86
Query: 404 KVLENRAQQDEERMDQ 451
K L + + DEE Q
Sbjct: 87 KELNSSLENDEESSQQ 102
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 26.6 bits (56), Expect = 2.3
Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 14/113 (12%)
Frame = +2
Query: 230 DLEEKEKQLTATEAEVAALNRKVQ----QIEEDLEKSEERSGTAQQKLLEAQQSADENNR 397
D++E E L E + R Q ++ E R AQQ+ + + +E N+
Sbjct: 522 DVDEDELDLMTDEQRMEEGRRMFQIFAARLFEQRVLQAYREKVAQQRQAKLLEEIEEENK 581
Query: 398 ------MCKVLENRAQQDEERMDQLT----NQLKEARLLAEDADGKSDEVSRK 526
+ K+ E ++D+++ +L Q +EA LAE A K+ E R+
Sbjct: 582 RKQERELKKIREKEKKRDKKKQLKLAKEEERQRREAERLAEQAAQKALEAKRQ 634
>SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1112
Score = 26.6 bits (56), Expect = 2.3
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +2
Query: 278 AALNRKVQ-QIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQL 454
AAL+ KV+ ++ E L EE ++ ++ + E +R L R + +E +
Sbjct: 677 AALSSKVEPEVVEKLLDEEE-----EEMIIRMAEEEKEYDRFVSELNQRHETEEWNQEAF 731
Query: 455 TNQLKEARLLAEDADGKSDEVSR 523
+LKE + +DEV++
Sbjct: 732 EKRLKELKNQKRSEKRDADEVTQ 754
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 26.6 bits (56), Expect = 2.3
Identities = 17/72 (23%), Positives = 37/72 (51%)
Frame = +2
Query: 311 EDLEKSEERSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKEARLLAE 490
ED+ E T+Q++LLE Q E++ +E + Q + + Q+++ +E + +
Sbjct: 485 EDIADEVETDATSQRELLERQIQKAESSEDTSEIE--SLQGKLSLPQVSSTQQEIQPSSS 542
Query: 491 DADGKSDEVSRK 526
+ S+E++ K
Sbjct: 543 VPEAASNEIAEK 554
>SPBC29A3.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 398
Score = 26.6 bits (56), Expect = 2.3
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 248 KQLTATEAEVAALNRKVQQIEEDLEKSEERSGTA 349
K T + E+ A + K QQ+ +DL+++E++ T+
Sbjct: 38 KDPTTSMKELVACSEKTQQVFDDLKRTEKKFHTS 71
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/65 (20%), Positives = 33/65 (50%)
Frame = +2
Query: 278 AALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLT 457
A L+ ++++++ + + R+G + ++ E +A E + KVL R Q + +++
Sbjct: 913 AELDNEIERLQMQIAEWRNRTGVSVEQAAEDYLNAKEKHDQAKVLVARLTQLLQALEETL 972
Query: 458 NQLKE 472
+ E
Sbjct: 973 RRRNE 977
>SPAC1486.09 |||ribosome biogenesis protein Nob1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 388
Score = 26.2 bits (55), Expect = 3.1
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Frame = +2
Query: 311 EDLEKSEERSGTAQQKLLEAQQSADENNRMC--KVLENRAQQDEERMDQLTNQLKEARL- 481
++ E S+ +S A+ ++LE + + NN+ EN+ Q+D E D+ + + +
Sbjct: 141 KETENSDPKS--AENEVLEGETTQHSNNKEAHPNTEENKEQEDNEEDDEDDGWITPSNIR 198
Query: 482 --LAEDADGKS 508
AED G+S
Sbjct: 199 KKKAEDGVGES 209
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 428 AVPCSPTLCTYGCSRQPTAGPRAASV 351
AVP SPTL + QPT P +A+V
Sbjct: 263 AVPLSPTLAVWLPMTQPTFQPPSANV 288
>SPCC569.01c |||DUF1773 family protein 5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 323
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/69 (20%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +2
Query: 233 LEEK-EKQLTATEAEVAALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKV 409
LE+K E + + E +++++ I+ + E+R + QK+ + + + +
Sbjct: 175 LEQKTEARFQSIEQRFNSIDQRFNSIDRRFDSMEQRLDSMDQKMETIDARSCRSIMLTRK 234
Query: 410 LENRAQQDE 436
LEN + D+
Sbjct: 235 LENTTRSDQ 243
>SPCP20C8.01c |||B13958 domain|Schizosaccharomyces pombe|chr
3|||Manual
Length = 247
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/69 (20%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +2
Query: 233 LEEK-EKQLTATEAEVAALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKV 409
LE+K E + + E +++++ I+ + E+R + QK+ + + + +
Sbjct: 175 LEQKTEARFQSIEQRFNSIDQRFNSIDRRFDSMEQRLDSMDQKMETIDARSCRSIMLTRK 234
Query: 410 LENRAQQDE 436
LEN + D+
Sbjct: 235 LENTTRSDQ 243
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 417 TGHSRTRSVWTSSPTN*KRPVFSPRTLTENP-TRFRENW 530
+G RT+S+ SP ++P T + P T +E+W
Sbjct: 406 SGSERTKSLSKESPVEPEKPALPDATSSSTPTTENKESW 444
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 25.4 bits (53), Expect = 5.4
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +1
Query: 88 DTCEQQARDANLRAEKVNEEV 150
D C++ +DANL+ ++NE +
Sbjct: 361 DPCKRALKDANLQTSEINEVI 381
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 25.4 bits (53), Expect = 5.4
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +2
Query: 284 LNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKVLENR---AQQDEERMDQL 454
L Q +DL E + ++L+ +SA+E + +VLE R Q+DE +
Sbjct: 259 LKATFNQQNQDLYNQTEALKSTNEELINQIKSAEELDSAIQVLEERYRTMQRDEVKFQSA 318
Query: 455 TNQLK 469
+ +K
Sbjct: 319 MSGMK 323
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 25.4 bits (53), Expect = 5.4
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +2
Query: 281 ALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSAD-ENNRMCKVLENRAQQDEERMDQLT 457
A + QQ + + + AQQ L AQQ+A+ E RM AQQ ++ ++ +
Sbjct: 334 AAQQAAQQAAQQQAELAAQQAAAQQAQLAAQQAAEMERQRMA------AQQHQQALEAIQ 387
Query: 458 NQLKEARLLAED 493
E + +A++
Sbjct: 388 MAQAEQQRIAQE 399
>SPAC9.11 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 328
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 130 EKVNEEVRELQKKLAQVEEDLILNKNKLEQA 222
E + +E++E + LAQ EE++ K+KL+ A
Sbjct: 295 EPLKKELQETKTLLAQKEEEISNLKDKLQNA 325
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 130 EKVNEEVRELQKKLAQVEEDLILNK 204
EK+N+ E K++ QVE D++LNK
Sbjct: 528 EKINQLTSE--KQILQVELDMLLNK 550
>SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 25.0 bits (52), Expect = 7.2
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 230 DLEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEERSGTAQQKLL--EAQQSAD 385
D E EK+L +T E + V+ ++ED+ T ++++ EA + D
Sbjct: 561 DREPSEKELPSTAKETSFAPNAVKTLDEDITPQSSNWQTVAKQIIFPEAYKKKD 614
>SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 589
Score = 25.0 bits (52), Expect = 7.2
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 248 KQLTATEAEVAALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQS 379
++L + E+A K Q++ K +RSG + LLE Q S
Sbjct: 382 EELNQKKRELAQQQLKEQELLMQKIKETDRSGNKRLMLLETQHS 425
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 25.0 bits (52), Expect = 7.2
Identities = 20/83 (24%), Positives = 37/83 (44%)
Frame = +2
Query: 236 EEKEKQLTATEAEVAALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKVLE 415
EEKE E V K +E++ ++ E++ +K + A +NN + +
Sbjct: 305 EEKEDAQNIKERMVDFCFSKF--MEKNQQRREQQDKGENKKRQDDVDQATDNNTNTILED 362
Query: 416 NRAQQDEERMDQLTNQLKEARLL 484
+ DEE +++ N +E LL
Sbjct: 363 DEKDNDEEEEEEIVN-AREKNLL 384
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase
Tlh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1919
Score = 25.0 bits (52), Expect = 7.2
Identities = 20/83 (24%), Positives = 37/83 (44%)
Frame = +2
Query: 236 EEKEKQLTATEAEVAALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKVLE 415
EEKE E V K +E++ ++ E++ +K + A +NN + +
Sbjct: 305 EEKEDAQNIKERMVDFCFSKF--MEKNQQRREQQDKGENKKRQDDVDQATDNNTNTILED 362
Query: 416 NRAQQDEERMDQLTNQLKEARLL 484
+ DEE +++ N +E LL
Sbjct: 363 DEKDNDEEEEEEIVN-AREKNLL 384
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.0 bits (52), Expect = 7.2
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 154 ELQKKLAQVEEDLILNKNKLEQANKG 231
E ++ QV + +LNKN ++NKG
Sbjct: 1514 EKRRSGRQVSDSYVLNKNSKNKSNKG 1539
>SPCC1672.02c |sap1||switch-activating protein
Sap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 254
Score = 24.6 bits (51), Expect = 9.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 230 DLEEKEKQLTATEAEVAALNRKVQQI 307
D EEK Q+ A EV A N+++QQ+
Sbjct: 176 DNEEKLMQVNAKMDEVLAENKRLQQL 201
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 24.6 bits (51), Expect = 9.5
Identities = 21/94 (22%), Positives = 42/94 (44%)
Frame = +2
Query: 233 LEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKVL 412
+EE E+Q EAE +L ++ ++DL K S + ++ + D+ + + L
Sbjct: 121 VEELERQAELIEAEAESLKATFKRGKKDLSKLSHLS-ELESRIERHKWHQDKLELIMRRL 179
Query: 413 ENRAQQDEERMDQLTNQLKEARLLAEDADGKSDE 514
EN +Q E ++ + + ++ D DE
Sbjct: 180 EN-SQISPEAVNDIQEDIMYYVECSQSEDFAEDE 212
>SPBC14F5.08 |med7||mediator complex subunit
Med7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 24.6 bits (51), Expect = 9.5
Identities = 21/83 (25%), Positives = 36/83 (43%)
Frame = +2
Query: 245 EKQLTATEAEVAALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKVLENRA 424
EKQL E++V L +Q+ E LEK + +++ QQ + E+
Sbjct: 288 EKQLKHEESQVELLRTHNRQMTETLEKYKSLDFNMEKEGDVIQQLKSSIKKPLSGAEDE- 346
Query: 425 QQDEERMDQLTNQLKEARLLAED 493
Q+ + +LK++ L ED
Sbjct: 347 QKSRSMFSKNDEKLKKSLELMED 369
>SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 24.6 bits (51), Expect = 9.5
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = +2
Query: 263 TEAEVAALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKVLENRA 424
T E + L +++ IEE+L+ +ER ++ + + A +N V ++R+
Sbjct: 188 TNPEFSILVERLKSIEENLQSLQERISHCERSVSLSPSFAPPSNVKSPVQQHRS 241
>SPCC569.03 |||DUF1773 family protein 4|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 396
Score = 24.6 bits (51), Expect = 9.5
Identities = 12/61 (19%), Positives = 32/61 (52%)
Frame = +2
Query: 251 QLTATEAEVAALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKVLENRAQQ 430
++TA + ++ L+RK+ ++ +++EER Q + + + ++ + + EN +
Sbjct: 258 EVTAMKDSISQLDRKIDLLD---QRTEERFNNMAQTMQKIDDRSCKSMMLTRKYENMVRS 314
Query: 431 D 433
D
Sbjct: 315 D 315
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 24.6 bits (51), Expect = 9.5
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +2
Query: 296 VQQIEEDLEKSEERSGT----AQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQ 463
VQ +++ E + + T AQ+KL + + + R+ E R ++ +++Q+TN
Sbjct: 1057 VQTLKKQKEFANQYDSTLLAQAQEKLEKLKVEVERRRRLLSEKEERRKELAIKIEQVTNS 1116
Query: 464 LKEARL 481
+ L
Sbjct: 1117 CSDLEL 1122
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,804,468
Number of Sequences: 5004
Number of extensions: 31476
Number of successful extensions: 210
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 210
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 221892220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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