Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30932
         (541 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    24   1.1  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   3.5  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   4.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   6.1  
AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...    21   8.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   8.1  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 111 SSLLFAGVGPCPWHC 67
           ++ +F  V PCPW C
Sbjct: 225 TTTIFVPVKPCPWIC 239


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +2

Query: 431 DEERMDQLTNQLKEARLLAEDADGKSD 511
           D  R+D + +  ++ARLL E +  ++D
Sbjct: 218 DGFRIDAINHMFEDARLLDEPSANRTD 244


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -1

Query: 229 PCWPAPACSCSGSGLPPPGRASSGVRGLPRLPSQHG 122
           P  P P  S + SG+PP       +  +P +PS  G
Sbjct: 416 PMPPIPNMS-NMSGMPPLPNMPGSMPTMPTMPSMAG 450


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/19 (47%), Positives = 11/19 (57%), Gaps = 1/19 (5%)
 Frame = -2

Query: 396 RLFSSA-DCWASSSFCWAV 343
           R F+SA D W+    CW V
Sbjct: 813 RKFTSASDVWSMGIVCWEV 831


>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 263 TEAEVAALNRKVQQIEEDLEKSEERSGTAQQKLLE 367
           TEAE   LN+K  +  E   K+ +R    +  L E
Sbjct: 130 TEAEEEVLNKKRSKKAEAKYKARQRFAKVEPALEE 164


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 217 APACSCSGSGLPPPGRASSGVR 152
           AP+C    + L  PG  S G+R
Sbjct: 367 APSCGGGPTILTTPGLDSDGIR 388


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,169
Number of Sequences: 438
Number of extensions: 2598
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)