Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30929
         (703 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    25   0.60 
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    25   0.60 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.4  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    21   7.4  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    21   7.4  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
 Frame = -3

Query: 626 VSSLTMHSQSSWA-----FCRSLSTERPSMVSGLMRMDREIFF 513
           VSS T+ SQS++      F  +L+ +   +   L+RMDR+I +
Sbjct: 145 VSSKTLASQSAYVQQDDLFIGTLTVKEHLIFQALLRMDRDISY 187


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
 Frame = -3

Query: 626 VSSLTMHSQSSWA-----FCRSLSTERPSMVSGLMRMDREIFF 513
           VSS T+ SQS++      F  +L+ +   +   L+RMDR+I +
Sbjct: 145 VSSKTLASQSAYVQQDDLFIGTLTVKEHLIFQALLRMDRDISY 187


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +1

Query: 487  KTKEQLEEEKK 519
            KTK++LEEEKK
Sbjct: 1068 KTKKELEEEKK 1078


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +1

Query: 487  KTKEQLEEEKK 519
            KTK++LEEEKK
Sbjct: 1068 KTKKELEEEKK 1078


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +1

Query: 487  KTKEQLEEEKK 519
            KTK++LEEEKK
Sbjct: 1068 KTKKELEEEKK 1078


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +1

Query: 487  KTKEQLEEEKK 519
            KTK++LEEEKK
Sbjct: 1068 KTKKELEEEKK 1078


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 640 DGISRSRV*RCTPRVPGPSVGVC 572
           DG  RS +     ++PGPSV VC
Sbjct: 92  DGNKRSII-VVNRKMPGPSVEVC 113


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 67  SRPSIAGEGDPEFIKR 114
           SR  +AG+ DPE  KR
Sbjct: 38  SRWMVAGKADPEMPKR 53


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 67  SRPSIAGEGDPEFIKR 114
           SR  +AG+ DPE  KR
Sbjct: 38  SRWMVAGKADPEMPKR 53


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.307    0.125    0.331 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,275
Number of Sequences: 336
Number of extensions: 1890
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)