Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30929
(703 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0232 + 27041793-27042087,27042822-27042943,27043098-270432... 39 0.003
11_04_0218 + 14983132-14984658,14984762-14984869,14984964-149851... 35 0.072
03_06_0155 - 32031370-32031707,32033066-32033279 34 0.13
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039... 32 0.38
12_02_0847 + 23630937-23631099,23631200-23631396,23631604-236317... 32 0.51
11_06_0722 - 26678873-26680843 32 0.51
06_03_1404 - 29928792-29929040,29929147-29929551,29930130-299302... 30 2.0
05_04_0158 + 18613265-18615304 30 2.0
05_07_0093 - 27648656-27648736,27649034-27649147,27649229-276492... 29 2.7
12_01_0979 - 9914779-9915327,9915409-9915536,9915947-9916050,991... 29 3.6
08_02_0957 + 23033602-23034749,23035519-23035765,23036598-230367... 29 3.6
02_03_0357 + 18075171-18077240 29 3.6
02_02_0321 - 8934512-8935504,8935581-8935715,8935831-8936217 29 4.7
09_04_0161 - 15232074-15232139,15232299-15232406,15233417-152335... 28 6.2
03_02_1012 + 13207907-13207990,13209196-13209280,13209402-132101... 28 6.2
09_06_0200 + 21539963-21541271,21541912-21542013,21542095-215422... 28 8.3
03_05_0882 + 28467691-28467730,28468386-28468675,28469262-284694... 28 8.3
01_06_0825 - 32245725-32245817,32246015-32248017,32248132-32248162 28 8.3
>02_05_0232 + 27041793-27042087,27042822-27042943,27043098-27043219,
27043601-27043705,27043828-27044257,27044356-27044517,
27044565-27045260,27045349-27046128,27046441-27046654,
27047621-27047981,27047993-27048140,27048276-27048419,
27048784-27048888,27049749-27049794,27050089-27050255,
27050338-27050490,27050654-27050950,27051053-27051220,
27051298-27051363,27051451-27051927,27052031-27052768,
27052935-27053120
Length = 1993
Score = 39.1 bits (87), Expect = 0.003
Identities = 32/126 (25%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Frame = +1
Query: 340 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 519
E+ ++ ++ + AMLQ +KD N +Q+K ++ ++E +TK Q +E
Sbjct: 1431 EEAKKFQKIKMDLLAMLQRVKDVENLNRNEKMQRKDMEEKIARQRMEIEETKRQRDELYH 1490
Query: 520 ISLSIRIKPLTIEGLSVD---KLRQKAQ-ELWECIVKL-ETEKYHLEERQKRQDYDLKEL 684
++ + L +E L K R+KA+ E+ + K+ + E +L E ++R+ ++E
Sbjct: 1491 ELKDVKEQKLCLERLDSSKETKRRRKAESEMLSALKKVHDLEHQYLNELKRRE--AVEET 1548
Query: 685 KERQKQ 702
RQK+
Sbjct: 1549 FARQKE 1554
>11_04_0218 +
14983132-14984658,14984762-14984869,14984964-14985125,
14985270-14985275
Length = 600
Score = 34.7 bits (76), Expect = 0.072
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = +1
Query: 469 AQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYHLEE 648
+++ R K E E +I +R P + D++R + Q+LW +L Y
Sbjct: 477 SEMRRRKCSELAEILDRIKKKLRACPKDLSSSEFDQVRSEMQDLWLKFTELSVFDYREAV 536
Query: 649 RQKRQDYDLKELKER 693
+ Y KELK+R
Sbjct: 537 VPLARMYQWKELKKR 551
>03_06_0155 - 32031370-32031707,32033066-32033279
Length = 183
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +1
Query: 334 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 513
IEE +QR EEA + +Q + +A K + + + G+ + R K+ E L E+
Sbjct: 98 IEELKQREEEATQAQQQADVKLLEAKKLASQYQKEADKCSSGMDTCEEAREKSSEALVEQ 157
Query: 514 KKIS 525
+K++
Sbjct: 158 RKLT 161
>02_05_0484 -
29401195-29401404,29401572-29401755,29401866-29403973,
29404320-29404403,29404507-29404777,29404864-29405117,
29405513-29405722,29406357-29406503
Length = 1155
Score = 32.3 bits (70), Expect = 0.38
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 2/125 (1%)
Frame = +1
Query: 331 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKK--SENFGLSNAQLERNKTKEQL 504
+I+ +R EE K+ +A LQ + ++KK S+ L + E N+ + +
Sbjct: 575 NIDHQRLENEELLKRERADLQRNLQLHRHELEMEMEKKQASKERELEEKENELNRKMDFV 634
Query: 505 EEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYHLEERQKRQDYDLKEL 684
E E K + + + L +L+++ + L E KLET+K + + K L
Sbjct: 635 ENELKRAAELNESKIQKILLEKKQLQKEKEVLVEDRQKLETDKADIRRDIDSLNTLSKSL 694
Query: 685 KERQK 699
KER++
Sbjct: 695 KERRE 699
Score = 29.1 bits (62), Expect = 3.6
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 8/132 (6%)
Frame = +1
Query: 331 DIEEKRQRLEEAEKKRQAMLQAMKDASKTG-------PNFTIQKKSENFGLSNAQLERNK 489
+ E K ++LEE EKK + + K G N ++ K +F L QLE K
Sbjct: 295 EAESKNRKLEEREKKIAEREEKVSAREKVGLQKLLEDHNVKLESKRRDFDL---QLENEK 351
Query: 490 TK-EQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYHLEERQKRQD 666
+ + +K+ L R K + S +KL +K Q L E KLE + L+ +
Sbjct: 352 KSFDAMLVQKEADLVQREKDVR---SSEEKLSKKEQVLNESKKKLEEWQNDLDTKSNALK 408
Query: 667 YDLKELKERQKQ 702
+ L+ +KQ
Sbjct: 409 KWEESLQNDEKQ 420
>12_02_0847 +
23630937-23631099,23631200-23631396,23631604-23631738,
23631904-23632077,23632195-23632407,23632507-23632751,
23632890-23632930,23633200-23633238,23633552-23633565
Length = 406
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1
Query: 331 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 510
+I E+R+R + ++ A+L+AMK+ N ++ E N +LE K+QL+E
Sbjct: 41 EIAEERERFQLEQRGNDALLEAMKE-ELVAANNELEAAKEEISRKNNELE--SVKKQLQE 97
Query: 511 EK 516
+
Sbjct: 98 SE 99
>11_06_0722 - 26678873-26680843
Length = 656
Score = 31.9 bits (69), Expect = 0.51
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +1
Query: 484 NKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYHLE 645
NKTK+ +E+K++ LS+ +K IE L K + +L C++ L + + +
Sbjct: 418 NKTKKGRKEDKRVRLSMDVKKTVIETL---KKNRGLGQLGNCVISLHANEVYYQ 468
>06_03_1404 -
29928792-29929040,29929147-29929551,29930130-29930280,
29930363-29930501,29930578-29930743,29930826-29931041,
29931142-29931323,29931412-29931538,29931974-29932112,
29932227-29932353,29932501-29932612,29932704-29932784,
29933330-29933483,29933569-29933689,29934003-29934045,
29934356-29934460
Length = 838
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 636 VFLGLEFDDALPEFLGLLSEFVDGET 559
VF+ EFD+ LP++L L VD +T
Sbjct: 451 VFISDEFDELLPKYLSFLKGLVDSDT 476
>05_04_0158 + 18613265-18615304
Length = 679
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Frame = +1
Query: 337 EEKRQRLEEAEKKRQAML-----QAMKDASKTGPNFTIQKK----SENFGLSNAQLERNK 489
+EK ++ +E E K Q L +AMK KTG N I+KK +E +A++ ++K
Sbjct: 608 QEKVEKNQEKEMKIQEKLGEIFDKAMKSEEKTGQNPGIEKKIQDTAEKKQEHDARVVQDK 667
Query: 490 TKEQLEEEKKI 522
++ +E KKI
Sbjct: 668 VEKIQDEAKKI 678
>05_07_0093 -
27648656-27648736,27649034-27649147,27649229-27649288,
27649464-27649687,27649799-27649886,27650326-27650532,
27650566-27650784,27650903-27651001,27651439-27651504,
27651654-27651737,27651829-27651888,27652041-27652325,
27652789-27652836,27652988-27653034,27653442-27653556,
27653958-27654032,27654227-27654298,27654944-27656124,
27656613-27656757
Length = 1089
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +1
Query: 565 SVDKLRQKAQELWECIVKLETEKYHLEERQKRQDYDLKELKERQKQ 702
S++K RQ+A E + + ++ E E R K+ + ++KEL+ R K+
Sbjct: 773 SLEKERQRASESRQEYLAIKEEAAMQEGRAKQLEEEIKELRTRHKK 818
>12_01_0979 -
9914779-9915327,9915409-9915536,9915947-9916050,
9919832-9919946,9921036-9921528
Length = 462
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/61 (32%), Positives = 26/61 (42%)
Frame = -1
Query: 667 SPVSFASLRDGISRSRV*RCTPRVPGPSVGVCRRRDPRWSAA*CGWTGRSSSPLPAAPWS 488
+P S AS +SR +P +P PS P CGW GR++ P AP
Sbjct: 3 APSSLAS-SSHLSRRATAAASPSIPPPSP------PPPPQRLRCGWVGRAAPPTRRAPGV 55
Query: 487 C 485
C
Sbjct: 56 C 56
>08_02_0957 +
23033602-23034749,23035519-23035765,23036598-23036744,
23036849-23037076
Length = 589
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +1
Query: 352 RLEEAEKKRQAMLQAMKDASKTGPNFT--IQKKSENFGLSNAQLERNKTKEQLEEEKKIS 525
RLE + +++A+ ++ ++T IQ+K E+ +LE +Q +
Sbjct: 254 RLEALQAEKEALTADVEKFEAVVKSWTVKIQEKEESSVHLEKELEAKLMDQQRIAAENEE 313
Query: 526 LSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYHLEER 651
L ++ + VD+++++ Q + VKLE LEE+
Sbjct: 314 LMKKVDAQVVNVRDVDRMQREIQSVERDNVKLENGNATLEEK 355
>02_03_0357 + 18075171-18077240
Length = 689
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 5/44 (11%)
Frame = +1
Query: 430 TIQKKSENFGLSNAQLERNKT-----KEQLEEEKKISLSIRIKP 546
+I++K +NF L+ ++ RN+T QL EE KIS+S + P
Sbjct: 594 SIKEKFKNFNLAFEEIYRNQTTWKVPDPQLREELKISISENVIP 637
>02_02_0321 - 8934512-8935504,8935581-8935715,8935831-8936217
Length = 504
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/121 (18%), Positives = 53/121 (43%)
Frame = +1
Query: 340 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 519
E+ Q A++ + L+ ++A G +K S+ + + +K K+ +
Sbjct: 235 EEEQMQRTAKELLEQYLKFRQEADDDGDGGDNKKASKKGKKKKKEKDPSKPKQPMSAYF- 293
Query: 520 ISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYHLEERQKRQDYDLKELKERQK 699
+ R L E +V ++ + E W+ + + E + R++R++Y ++ RQ+
Sbjct: 294 VYTQQRRAALVAEKKNVPEIGRITGEEWKAMSEAEKAPFEAAARKQREEYQVEMAAYRQR 353
Query: 700 Q 702
+
Sbjct: 354 K 354
>09_04_0161 -
15232074-15232139,15232299-15232406,15233417-15233506,
15233617-15233733,15234408-15234527,15234930-15236168
Length = 579
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +2
Query: 71 DRRSRVREIQNSSSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSRPSARFLVP 250
D SR + ++ S T + R S TS N P+R S++ + S PS+R P
Sbjct: 38 DVASRYKNGLSAHSAATTARRCTSPSPGRTSANECTPEPKRAQSADRRRPSTPSSRVSTP 97
>03_02_1012 +
13207907-13207990,13209196-13209280,13209402-13210186,
13210262-13210462,13210580-13210690,13211105-13211487,
13211594-13211702,13211786-13211866,13212088-13212156,
13212379-13212467,13212619-13212780,13212859-13212916,
13213143-13213373,13213516-13213662,13213779-13214333,
13214562-13214819,13215096-13215203,13215760-13215854,
13215946-13216102,13216466-13216666,13217542-13217670,
13218292-13218567
Length = 1457
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/85 (20%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = +1
Query: 460 LSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYH 639
L Q++ + E + E K +S +K + + +L + W+ +++ E+Y
Sbjct: 368 LKKRQVDAKRFSENCQREVKFKVSRSLKLMRSAAIRTRRLARDMLIFWK---RVDKEQYE 424
Query: 640 LEERQKRQDYDL----KELKERQKQ 702
L +R++++ + +EL+E ++Q
Sbjct: 425 LRKREEKEAAEALKREEELREAKRQ 449
>09_06_0200 +
21539963-21541271,21541912-21542013,21542095-21542291,
21542396-21542603,21542685-21542922,21543010-21543160,
21543538-21543849
Length = 838
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/31 (32%), Positives = 13/31 (41%)
Frame = -1
Query: 556 RWSAA*CGWTGRSSSPLPAAPWSCCAPAGHC 464
RWS+ W P P+ C P G+C
Sbjct: 272 RWSSGSSAWVVLQEWPAGCDPYDFCGPNGYC 302
>03_05_0882 +
28467691-28467730,28468386-28468675,28469262-28469411,
28470126-28470214,28470331-28470440,28470545-28470639,
28471110-28471162,28471374-28471539,28471909-28472001,
28472304-28472432,28472549-28472668,28472862-28472942,
28473495-28473602,28473895-28474038,28474120-28474218,
28474300-28474379,28474830-28474922,28475197-28475320
Length = 687
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 553 IEGLSVDKLRQKAQELWECIVKLETEKYHLEERQKRQDYDLKELKERQK 699
+E L +DK R+ EL + VK+ + LEE +K+ + +E+QK
Sbjct: 386 LEALLLDKNRKMEHELTQLKVKISEKSNLLEEAEKKIAELTAKAEEQQK 434
>01_06_0825 - 32245725-32245817,32246015-32248017,32248132-32248162
Length = 708
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 537 HQAADHR-GSLRRQTPTEGPGTLGVHRQTRDREIPSRRE 650
H A+ H+ GSL + PTE G+ V + D+ +P+ E
Sbjct: 242 HDASAHQVGSLELRAPTEMMGSHHVFEEATDQTVPNGSE 280
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.307 0.125 0.331
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,540,674
Number of Sequences: 37544
Number of extensions: 246865
Number of successful extensions: 898
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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