Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30929
(703 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g03080.1 68414.m00282 kinase interacting family protein simil... 39 0.003
At5g52280.1 68418.m06488 protein transport protein-related low s... 39 0.004
At5g46070.1 68418.m05665 guanylate-binding family protein contai... 36 0.034
At2g25350.1 68415.m03032 phox (PX) domain-containing protein wea... 34 0.079
At5g25870.1 68418.m03069 hypothetical protein 34 0.10
At3g51010.1 68416.m05585 expressed protein 33 0.24
At4g39190.1 68417.m05549 expressed protein ; expression support... 32 0.42
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 32 0.42
At1g10890.1 68414.m01251 F-box family protein contains Pfam PF00... 32 0.42
At3g54670.1 68416.m06049 structural maintenance of chromosomes (... 31 0.56
At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains... 31 0.56
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 31 0.74
At3g07780.1 68416.m00949 expressed protein 31 0.98
At1g63300.1 68414.m07156 expressed protein similar to Intracellu... 30 1.3
At1g04160.1 68414.m00406 myosin family protein contains Pfam pro... 30 1.3
At5g65770.1 68418.m08276 nuclear matrix constituent protein-rela... 30 1.7
At5g45520.1 68418.m05591 hypothetical protein 30 1.7
At5g26350.1 68418.m03150 hypothetical protein 30 1.7
At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata format... 30 1.7
At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata format... 30 1.7
At3g05830.1 68416.m00654 expressed protein 30 1.7
At1g48280.1 68414.m05393 hydroxyproline-rich glycoprotein family... 30 1.7
At1g45545.1 68414.m05199 hypothetical protein contains Pfam prof... 30 1.7
At1g21630.1 68414.m02708 calcium-binding EF hand family protein ... 30 1.7
At4g38070.1 68417.m05377 bHLH family protein contains Pfam profi... 29 2.3
At5g08080.1 68418.m00942 syntaxin, putative (SYP132) similar to ... 29 3.0
At5g05210.1 68418.m00555 nucleolar matrix protein-related contai... 29 3.0
At5g03660.1 68418.m00325 expressed protein low similarity to out... 29 3.0
At3g23930.1 68416.m03006 expressed protein 29 3.0
At2g41960.1 68415.m05191 expressed protein 29 3.0
At5g41540.1 68418.m05048 disease resistance protein (TIR-NBS-LRR... 29 3.9
At3g43160.1 68416.m04554 expressed protein merozoite surface pro... 29 3.9
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 29 3.9
At1g01670.1 68414.m00085 U-box domain-containing protein 29 3.9
At3g58940.1 68416.m06568 F-box family protein contains F-box dom... 28 5.2
At3g28770.1 68416.m03591 expressed protein 28 5.2
At1g13220.2 68414.m01534 nuclear matrix constituent protein-rela... 28 5.2
At5g08600.1 68418.m01023 U3 ribonucleoprotein (Utp) family prote... 28 6.9
At3g03800.1 68416.m00390 syntaxin, putative (SYP131) similar to ... 28 6.9
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 28 6.9
At1g48405.1 68414.m05407 hypothetical protein 28 6.9
At1g05320.1 68414.m00539 myosin-related similar to non-muscle my... 28 6.9
At5g42880.1 68418.m05226 hypothetical protein contains Pfam prof... 27 9.1
At5g27230.1 68418.m03248 expressed protein ; expression support... 27 9.1
At5g15920.1 68418.m01862 structural maintenance of chromosomes (... 27 9.1
At1g65470.1 68414.m07427 chromatin assembly factor-1 (FASCIATA1)... 27 9.1
At1g13220.1 68414.m01533 nuclear matrix constituent protein-rela... 27 9.1
>At1g03080.1 68414.m00282 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1744
Score = 39.1 bits (87), Expect = 0.003
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Frame = +1
Query: 334 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 513
++E+ R EAE Q + Q + + ++ ++ + L + + N +E+++E
Sbjct: 488 VQEENLRFMEAETAFQTLQQLHSQSQEELSTLALELQNRSQILKDMEARNNGLQEEVQEA 547
Query: 514 KKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETE-KYHLEERQKRQD--YDLKE 681
K S S+ L+ S+ L+++ +L E I KLE E + +++R Q Y LKE
Sbjct: 548 KDQSKSLNELNLS-SAASIKSLQEEVSKLRETIQKLEAEVELRVDQRNALQQEIYCLKE 605
>At5g52280.1 68418.m06488 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 853
Score = 38.7 bits (86), Expect = 0.004
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Frame = +1
Query: 334 IEEKRQRLE-EAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLE- 507
++EK +RL E E K K N +Q K+ E + KEQ +
Sbjct: 583 LQEKCKRLSLEMESKLSEHENLTKKTLAEANNLRLQNKTLEEMQEKTHTEITQEKEQRKH 642
Query: 508 -EEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYHLEERQKRQDYDLK 678
EEK +LS++++ L E L + KLR ++ ETEK E R++R +++ K
Sbjct: 643 VEEKNKALSMKVQMLESEVLKLTKLRDESS-----AAATETEKIIQEWRKERDEFERK 695
>At5g46070.1 68418.m05665 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding protein,
C-terminal domain
Length = 1060
Score = 35.5 bits (78), Expect = 0.034
Identities = 28/120 (23%), Positives = 59/120 (49%)
Frame = +1
Query: 340 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 519
++ Q E+A ++ ++ A KD T ++K ++ + + L+ ++K + E +
Sbjct: 654 KETQLREDALREEFSITLANKDEEITEKATKLEKAEQSLTVLRSDLKVAESKLESFEVEL 713
Query: 520 ISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYHLEERQKRQDYDLKELKERQK 699
SL + + +T + +D +KA + KLE EK +E++ + + E+KER K
Sbjct: 714 ASLRLTLSEMTDK---LDSANKKALAYEKEANKLEQEKIRMEQKYRSEFQRFDEVKERCK 770
>At2g25350.1 68415.m03032 phox (PX) domain-containing protein weak
similarity to SP|Q9UTK5 Abnormal long morphology protein
1 (Sp8) {Schizosaccharomyces pombe}; contains Pfam
profile PF00787: PX domain
Length = 643
Score = 34.3 bits (75), Expect = 0.079
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Frame = +1
Query: 331 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSE---NFGLSNAQLERNKTKEQ 501
D+EE RQ+ E E K ++ D SKT N TI + E + QLE + ++
Sbjct: 455 DMEELRQKTFEMELKLKSKEDGSSD-SKTSGNSTISESHELLQEMDATKQQLE-DLSRRY 512
Query: 502 LEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYHLEER 651
+E E K I++ ++ L + + + K +TEK +ER
Sbjct: 513 VELEAKSKADIKVLVREVKSLRRSHMEMEKELTRSLTEKSDTEKLLQQER 562
>At5g25870.1 68418.m03069 hypothetical protein
Length = 173
Score = 33.9 bits (74), Expect = 0.10
Identities = 27/113 (23%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Frame = +1
Query: 388 LQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRIKP-LTIEGL 564
++ MK KT + ++ A++ ++ +E+++ ++ + K L IE
Sbjct: 1 MEDMKSLIKTSKELRKRIETRRENKEMAKMRETSDEKLIEKDEDVTKAGEFKEMLAIEKT 60
Query: 565 -----SVDKLRQKAQELWECIVKLETEKYHLEERQKRQDYDLKE--LKERQKQ 702
+ K + +E+ E +VKLE + Y LEE + R++ +KE LK + K+
Sbjct: 61 WQIWEELLKEHDEFEEISEILVKLEKKYYELEEVENRENLQMKEKTLKRKYKR 113
>At3g51010.1 68416.m05585 expressed protein
Length = 188
Score = 32.7 bits (71), Expect = 0.24
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +1
Query: 334 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 513
I ++R + +KKRQA++Q K + +++K A ER +QLEEE
Sbjct: 125 IGQRRAFILSEKKKRQALVQEAKRKKRIKQ---VERKMAAVARDRAWAERLIELQQLEEE 181
Query: 514 KKISLS 531
KK S+S
Sbjct: 182 KKKSMS 187
>At4g39190.1 68417.m05549 expressed protein ; expression supported
by MPSS
Length = 277
Score = 31.9 bits (69), Expect = 0.42
Identities = 26/108 (24%), Positives = 52/108 (48%)
Frame = +1
Query: 346 RQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKIS 525
+ + EK+ +A +A + ++ +K+S + KTK ++ EKK+
Sbjct: 119 QDEMRSGEKQSEAENEAKQSITENKAKENEEKQSITESRVKKSVTEKKTK-RIISEKKVK 177
Query: 526 LSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYHLEERQKRQDY 669
S + + LT + SV+ R+K E+ + + EK +L E+++ Q Y
Sbjct: 178 QS-KPEKLTKQSTSVN--REKQSEVEHKDITMTIEKQNLTEKRQIQSY 222
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 31.9 bits (69), Expect = 0.42
Identities = 28/128 (21%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Frame = +1
Query: 340 EKRQRLEE-AEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQL---- 504
E+R++ EE A K+ +A + ++A + T +KK E + ER + +E+
Sbjct: 444 ERRRKEEEEARKREEAKRREEEEAKRREEEETERKKREEEEARKREEERKREEEEAKRRE 503
Query: 505 -EEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYHLEERQ-KRQDYDLK 678
E +K+ + + + E +++ +K +E + + E E+ EE++ KR++ + +
Sbjct: 504 EERKKREEEAEQARKREEEREKEEEMAKKREEERQRKEREEVERKRREEQERKRREEEAR 563
Query: 679 ELKERQKQ 702
+ +E +K+
Sbjct: 564 KREEERKR 571
Score = 30.7 bits (66), Expect = 0.98
Identities = 19/127 (14%), Positives = 64/127 (50%), Gaps = 5/127 (3%)
Frame = +1
Query: 337 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQL---- 504
EE+++ EEA+++ + + ++A + ++K E + + K +E++
Sbjct: 490 EERKREEEEAKRREEERKKREEEAEQARKREEEREKEEEMAKKREEERQRKEREEVERKR 549
Query: 505 -EEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYHLEERQKRQDYDLKE 681
EE+++ + E +++ ++ ++ + + E E+ EE++++++ ++ +
Sbjct: 550 REEQERKRREEEARKREEERKREEEMAKRREQERQRKEREEVERKIREEQERKREEEMAK 609
Query: 682 LKERQKQ 702
+E+++Q
Sbjct: 610 RREQERQ 616
>At1g10890.1 68414.m01251 F-box family protein contains Pfam
PF00646: F-box domain; contains TIGRFAM TIGR01640 :
F-box protein interaction domain
Length = 592
Score = 31.9 bits (69), Expect = 0.42
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Frame = +1
Query: 340 EKRQRLEEAEKKRQ--AMLQAMKDASKTGPNFTIQKK-SENFGLSNAQLE----RNKTKE 498
EK +R EE K+RQ A L+ +++ + I+KK E+ ++E + ++
Sbjct: 61 EKLKREEEERKRRQREAELKLIEEETVKRVEEAIRKKVEESLQSEKIKMEILTLLEEGRK 120
Query: 499 QLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKL------ETEKYHLEERQKR 660
+L EE L + IE ++ Q+ +E E I + E ++ ERQ++
Sbjct: 121 RLNEEVAAQLEEEKEASLIEAKEKEEREQQEKEERERIAEENLKRVEEAQRKEAMERQRK 180
Query: 661 QDYDLKELKERQKQ 702
++ +EL+E Q+Q
Sbjct: 181 EEERYRELEELQRQ 194
>At3g54670.1 68416.m06049 structural maintenance of chromosomes
(SMC) family protein similar to SMC1 protein [Bos
taurus] GI:4235253, 14S cohesin SMC1 subunit (SMC
protein) [Xenopus laevis] GI:3328231; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1257
Score = 31.5 bits (68), Expect = 0.56
Identities = 30/132 (22%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Frame = +1
Query: 340 EKRQRLEEAEK--KRQAMLQAM----KDASKTGPNFTIQKKSENFGLSNAQ-LERNKTKE 498
EK RL+E K KR+ L + D K + +K + + + ER K
Sbjct: 217 EKHLRLQEELKALKRERFLWQLYNIENDIEKANEDVDSEKSNRKDVMRELEKFEREAGKR 276
Query: 499 QLEEEKKIS-LSIRIKPLTIEGLSVDKLRQKA----QELWECIVKLETEKYHLEERQKRQ 663
++E+ K + ++ R K + + + K++ + +E+ K+ET + +++R+K +
Sbjct: 277 KVEQAKYLKEIAQREKKIAEKSSKLGKIQPELLRFKEEIARIKAKIETNRKDVDKRKKEK 336
Query: 664 DYDLKELKERQK 699
KE+++ QK
Sbjct: 337 GKHSKEIEQMQK 348
>At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 1340
Score = 31.5 bits (68), Expect = 0.56
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +1
Query: 334 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNA-QLERNKTKEQLEE 510
++ K++ KK++ + K +KTG + +KK+ + +S +++RN T E+ +
Sbjct: 898 VDVKQETGSPDTKKKEGASSSSKKDTKTGEDKKAEKKNNSETMSEGKKIDRNNTDEKEVK 957
Query: 511 EKKISLSIRIKPLTIEGLSVDKLRQKAQE 597
EK I+ + E K R+K +E
Sbjct: 958 EKVTEKEIKERGGKDESRIQVKDRKKCEE 986
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 31.1 bits (67), Expect = 0.74
Identities = 21/93 (22%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Frame = +1
Query: 433 IQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECI 612
I++K+E + + NK++E+ + +KKI + + + E V+ + + QE E +
Sbjct: 281 IEEKTEEMKEQDNN-QANKSEEEEDVKKKIDENETPEKVDTESKEVESVEETTQEKEEEV 339
Query: 613 VKLETEKYHLEERQK---RQDYDLKELKERQKQ 702
+ E+ EE++K ++D ++++E +K+
Sbjct: 340 KEEGKERVEEEEKEKEKVKEDDQKEKVEEEEKE 372
>At3g07780.1 68416.m00949 expressed protein
Length = 566
Score = 30.7 bits (66), Expect = 0.98
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Frame = +1
Query: 460 LSNAQLERNKTKEQLEEEKKISLSIRIKPLTIE--GLSVDKLRQKAQELWECIVKLETEK 633
++ Q+ER K K+Q+EE ++I +R+K E L ++ + +A+ L E IVK + EK
Sbjct: 434 VAELQMERQKKKQQIEEVERI---VRLKQAEAEMFQLKANEAKVEAERL-ERIVKAKKEK 489
>At1g63300.1 68414.m07156 expressed protein similar to Intracellular
protein transport protein USO1 (Swiss-Prot:P25386)
[Saccharomyces cerevisiae]; similar to Myosin II heavy
chain, non muscle (Swiss-Prot:P08799) [Dictyostelium
discoideum]
Length = 1029
Score = 30.3 bits (65), Expect = 1.3
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
Frame = +1
Query: 334 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 513
+ E ++L + + ML+ + + S N QK+ E +N E KE++E
Sbjct: 684 LHELSEKLSFKTSQMERMLENLDEKSNEIDN---QKRHEEDVTANLNQEIKILKEEIENL 740
Query: 514 KKISLSIRIKPLTIEGLSVD--KLRQKAQELWECIVKLETEKYHLEER 651
KK S+ ++ E L VD K ++ E + + +K LE +
Sbjct: 741 KKNQDSLMLQAEQAENLRVDLEKTKKSVMEAEASLQRENMKKIELESK 788
>At1g04160.1 68414.m00406 myosin family protein contains Pfam
profiles: PF02736 myosin N-terminal SH3-like domain,
PF00063 myosin head (motor domain), PF00612 IQ
calmodulin-binding motif, PF01843: DIL domain
Length = 1500
Score = 30.3 bits (65), Expect = 1.3
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 361 EAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGL----SNAQLERNKTKEQLEEEKKISL 528
EA K +L +K+ + +EN L S+ +++ ++T ++L E +IS
Sbjct: 949 EAAKTVSEVLPIIKEVPVVDQELMEKLTNENEKLKGMVSSLEIKIDETAKELHETARISQ 1008
Query: 529 SIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEK 633
R+K V KL+ Q L E I +ETEK
Sbjct: 1009 D-RLKQALAAESKVAKLKTAMQRLEEKISDMETEK 1042
>At5g65770.1 68418.m08276 nuclear matrix constituent protein-related
low similarity to nuclear matrix constituent protein 1
(NMCP1) [Daucus carota] GI:2190187
Length = 1042
Score = 29.9 bits (64), Expect = 1.7
Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Frame = +1
Query: 334 IEEKRQRLEEA-EKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 510
IE +++ LE E KR+ + + +D K F +KK E + + + K E ++
Sbjct: 648 IEMQKRELEYCIENKREELENSSRDREKA---FEQEKKLEEERIQSLKEMAEKELEHVQV 704
Query: 511 EKKISLSIRIK-PLTIEGLSVD--KLRQKAQELWECIVKLETEKYHLEERQKRQDYDLKE 681
E K + R++ L E + +L+ +EL KLET+++ L + ++++E
Sbjct: 705 ELKRLDAERLEIKLDRERREREWAELKDSVEELKVQREKLETQRHMLRAERDEIRHEIEE 764
Query: 682 LKE 690
LK+
Sbjct: 765 LKK 767
>At5g45520.1 68418.m05591 hypothetical protein
Length = 1167
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Frame = +1
Query: 331 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENF-----GLSNAQLERNKTK 495
++E+ ++ E E++ + +++ KT P+ +K +N G SN + + +K K
Sbjct: 624 NLEDGKKHDEGKEERSLKSDEVVEEEKKTSPSEEATEKFQNKPGDQKGKSNVEGDGDKGK 683
Query: 496 EQLEEEKK 519
LEEEKK
Sbjct: 684 ADLEEEKK 691
>At5g26350.1 68418.m03150 hypothetical protein
Length = 126
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +1
Query: 571 DKLRQKAQELWECIVKLETEKYHLEERQKRQDYDLKELKERQK 699
+KL ++ ++L + +LE EK LEE +K+ ++++ ER+K
Sbjct: 58 NKLEEEKKKLEKEKKQLEEEKKQLEEEKKQLEFEVMGANEREK 100
>At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 636 VFLGLEFDDALPEFLGLLSEFVDGET 559
VF+ EFD+ LP++L L VD +T
Sbjct: 423 VFISDEFDELLPKYLSFLKGLVDSDT 448
>At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 636 VFLGLEFDDALPEFLGLLSEFVDGET 559
VF+ EFD+ LP++L L VD +T
Sbjct: 423 VFISDEFDELLPKYLSFLKGLVDSDT 448
>At3g05830.1 68416.m00654 expressed protein
Length = 336
Score = 29.9 bits (64), Expect = 1.7
Identities = 35/131 (26%), Positives = 69/131 (52%), Gaps = 15/131 (11%)
Frame = +1
Query: 343 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLER-NKTKEQLEEE-K 516
++Q EE + + + +A+ A G + +QK E+ +S + ER N+ E +EE
Sbjct: 167 EKQLREEVRRIEREVTEAIAKAGIGGMDSELQKLLED--VSPMKFERMNRLVEVKDEEIT 224
Query: 517 KISLSIRI-----KPLTIEGLS-VDKLRQKAQELWECIVKLE-------TEKYHLEERQK 657
K+ IR+ K T E S ++K R+ Q+L + ++KLE ++ L+ + +
Sbjct: 225 KLKDEIRLMSGQWKHKTKELESQLEKQRRTDQDLKKKVLKLEFCLQEARSQTRKLQRKGE 284
Query: 658 RQDYDLKELKE 690
R+D ++KE+++
Sbjct: 285 RRDMEIKEIRD 295
>At1g48280.1 68414.m05393 hydroxyproline-rich glycoprotein family
protein
Length = 558
Score = 29.9 bits (64), Expect = 1.7
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +1
Query: 337 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTK---EQLE 507
+EKR+R+EE E+K +KD N ++ + E SN +LE N K + +
Sbjct: 112 DEKRKRMEELEEKLVVNESLIKDLQLQVLN--LKTELEEARNSNVELELNNRKLSQDLVS 169
Query: 508 EEKKI-SLSIRIKP 546
E KI SLS KP
Sbjct: 170 AEAKISSLSSNDKP 183
>At1g45545.1 68414.m05199 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 752
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +1
Query: 478 ERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYHLEERQK 657
E K +E + + KK ++ + + +++ R +EL KLE EK EE+Q
Sbjct: 194 ELEKIQEDMPDYKKQAVVAEEAKHQVV-MELERTRNVVEEL-----KLELEKAEKEEQQA 247
Query: 658 RQDYDLKELKERQKQ 702
+QD DL +L+ + +
Sbjct: 248 KQDSDLAKLRVEEME 262
>At1g21630.1 68414.m02708 calcium-binding EF hand family protein
contains INTERPRO:IPR002048 calcium-binding EF-hand
domain; ESTs gb|T44428 and gb|AA395440 come from this
gene
Length = 1218
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +1
Query: 478 ERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYH---LEE 648
E ++ EE+ K S ++ K LTIE + +++K EL++ IVK E K ++E
Sbjct: 656 ELESLAKKYEEKYKKSGNVGSK-LTIEEATFRDIQEKKMELYQAIVKFEEGKLDDSIVKE 714
Query: 649 RQKRQDYDLKEL 684
R + L+EL
Sbjct: 715 RTEHIQSGLEEL 726
>At4g38070.1 68417.m05377 bHLH family protein contains Pfam profile:
PF00010 helix-loop-helix DNA-binding domain; PMID:
12679534; putative bHLH131 transcription factor
Length = 1513
Score = 29.5 bits (63), Expect = 2.3
Identities = 27/113 (23%), Positives = 56/113 (49%)
Frame = +1
Query: 352 RLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLS 531
+ E E++++ M+ + +AS+ N +++K+ + A++E K + E K+I
Sbjct: 102 KYREFEEEKRNMMSGLDEASEK--NIDLEQKNNVY---RAEIEGLKGLLAVAETKRIEAE 156
Query: 532 IRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYHLEERQKRQDYDLKELKE 690
T++G+ + R + +VK+E EK +EE+ K + K L+E
Sbjct: 157 -----KTVKGMKEMRGRD------DVVVKMEEEKSQVEEKLKWKKEQFKHLEE 198
>At5g08080.1 68418.m00942 syntaxin, putative (SYP132) similar to
SP|Q9ZSD4 Syntaxin 121 (AtSYP121) (Syntaxin-related
protein At-Syr1) {Arabidopsis thaliana}
Length = 304
Score = 29.1 bits (62), Expect = 3.0
Identities = 24/83 (28%), Positives = 40/83 (48%)
Frame = +1
Query: 334 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 513
I+++ +L++ KK QA + K +K I+K E + R K +LEE
Sbjct: 44 IDKQYDKLDKLLKKLQASHEESKSVTKAPAMKAIKKTMEKDVDEVGSIARF-IKGKLEEL 102
Query: 514 KKISLSIRIKPLTIEGLSVDKLR 582
+ +L+ R KP +G VD+ R
Sbjct: 103 DRENLANRQKPGCAKGSGVDRSR 125
>At5g05210.1 68418.m00555 nucleolar matrix protein-related contains
Pfam domain, PF04935: Surfeit locus protein 6
Length = 386
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/59 (20%), Positives = 33/59 (55%)
Frame = +1
Query: 346 RQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKI 522
+Q + + +K+++ + K+ + F ++K+ + G ++E+NK ++ + EKK+
Sbjct: 310 KQSIHKDKKRQEKNAEKWKERIEGQQKFKVEKQQKRSGNIADRIEQNKMRKIAKREKKL 368
>At5g03660.1 68418.m00325 expressed protein low similarity to outer
surface protein F [Borrelia burgdorferi] GI:466482;
contains Pfam profile PF04949: Family of unknown
function (DUF662)
Length = 173
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 397 MKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRIK 543
+KD +F+ Q K E+ LS L K KE+ E+KK+ + R++
Sbjct: 18 LKDQLSESMSFSSQMKKEDDELSMKALSAFKAKEEEIEKKKMEIRERVQ 66
>At3g23930.1 68416.m03006 expressed protein
Length = 224
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 91 GDPEFIKRQDQKRSDLDEQLKEYINEWRKQR 183
G IK +D++ + QLKE EWRK+R
Sbjct: 26 GRRHLIKERDEREKVMFLQLKEAEREWRKER 56
>At2g41960.1 68415.m05191 expressed protein
Length = 1215
Score = 29.1 bits (62), Expect = 3.0
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Frame = +1
Query: 349 QRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKT---KEQLEEEKK 519
+ EEAE++ +L G QK +++ L+ L T KEQ+E+ +
Sbjct: 401 EHAEEAEEEEDEVLIDKDGNELDGECLRPQKHAKSPELAREFLLDAATVIFKEQVEKAFR 460
Query: 520 ISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYHLEE--RQKRQDYDLKE---L 684
+ + LS + L Q+ + IV LE + LEE ++KR++ + KE +
Sbjct: 461 DGTARQNAHSIFVCLSSELLEQRVHIACKEIVTLEKQNKLLEEEEKEKREEEERKERKRI 520
Query: 685 KERQKQ 702
KER+K+
Sbjct: 521 KEREKK 526
>At5g41540.1 68418.m05048 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1038
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +1
Query: 331 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLE 480
D EKRQ L EAE+ R + S G +F + K SE F +S E
Sbjct: 502 DEPEKRQFLVEAEEIRDVLANETGTGSVLGISFDMSKVSE-FSISGRAFE 550
>At3g43160.1 68416.m04554 expressed protein merozoite surface
protein 2 (MSP-2), EMBL:PFU72951, Plasmodium falciparum
Length = 295
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 68 VDRRSRVREIQNSSSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSR 226
+D+ + +S+ +TRSGR +++ +ST NS R SS K R
Sbjct: 91 IDQELKSSTGSENSTTRTRSGRGFIDYVLESSTGTENSSTRTAESSTRTKNGR 143
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 28.7 bits (61), Expect = 3.9
Identities = 26/117 (22%), Positives = 43/117 (36%)
Frame = +1
Query: 340 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 519
EK Q E E + + K + G Q S + TKE+L+
Sbjct: 480 EKEQTANELEASKTTIEDLTKQLTSEGEKLQSQISSHTEENNQVNAMFQSTKEELQSV-- 537
Query: 520 ISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYHLEERQKRQDYDLKELKE 690
++ + LT+E D L + ++L + + H EE +K +LKE
Sbjct: 538 --IAKLEEQLTVESSKADTLVSEIEKLRAVAAEKSVLESHFEELEKTLSEVKAQLKE 592
>At1g01670.1 68414.m00085 U-box domain-containing protein
Length = 365
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = +1
Query: 337 EEKRQRLEEAEKKRQ-----AMLQAMKDASKTGPNFT-IQKKSENFGLSNAQLERNKTKE 498
EE+R+RLE E KR+ M + ++A + T I E + E N+ K
Sbjct: 177 EEQRRRLEIEELKREKEQRDKMRRVREEALSSSSGVTKILYNEEVMRRREVEAELNRAKA 236
Query: 499 QLEEEKKISLSIR 537
++E+ K++ + ++
Sbjct: 237 EIEDMKRVQIELK 249
>At3g58940.1 68416.m06568 F-box family protein contains F-box domain
Pfam:PF00646
Length = 618
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 592 QELWECIVKLETEKYHLEERQKRQDYDLKELKER 693
QE+ + ++++ E L+ERQ+ Q+ L +LKER
Sbjct: 486 QEMSQDYLQMQLEVADLKERQRDQEAKLADLKER 519
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 28.3 bits (60), Expect = 5.2
Identities = 25/123 (20%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Frame = +1
Query: 331 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 510
+++++ +E K + L+ +K + S+N + +++KTKE+ ++
Sbjct: 970 ELKKQEDNKKETTKSENSKLKEENKDNKEKKE-SEDSASKNREKKEYEEKKSKTKEEAKK 1028
Query: 511 EKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLET-EKYHLEERQKRQDYDLKELK 687
EKK S + + E K ++++++L + ET EK E + ++ D KE +
Sbjct: 1029 EKKKSQDKKREEKDSEERKSKKEKEESRDLKAKKKEEETKEKKESENHKSKKKEDKKEHE 1088
Query: 688 ERQ 696
+ +
Sbjct: 1089 DNK 1091
>At1g13220.2 68414.m01534 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 1128
Score = 28.3 bits (60), Expect = 5.2
Identities = 39/217 (17%), Positives = 87/217 (40%), Gaps = 6/217 (2%)
Frame = +1
Query: 64 ESRPSIAGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAXXXXXXXXXXXXQAKRKVS 243
E+R S+ + F K ++ +Q +EY+NEW K+ + KR ++
Sbjct: 234 ETRESVLQQERLSFTKERESYEGTFQKQ-REYLNEWEKK-----LQGKEESITEQKRNLN 287
Query: 244 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEEKRQRLEEAEKKRQAMLQAMKDASKTGP 423
+ + ++ E+ K+ + + K+A T
Sbjct: 288 QREEKVNEIEKKLKLKEKELEEWNRKVDLSMSKSKETEEDITKRLEELTTKEKEA-HTLQ 346
Query: 424 NFTIQKKSENFGLSNAQLERNKTK-EQLEEEKKISLSIRIKPLTIE----GLSVDK-LRQ 585
+ K++E + R T+ ++L +++K L ++ +E S+DK L++
Sbjct: 347 ITLLAKENELRAFEEKLIAREGTEIQKLIDDQKEVLGSKMLEFELECEEIRKSLDKELQR 406
Query: 586 KAQELWECIVKLETEKYHLEERQKRQDYDLKELKERQ 696
K +EL V+++ + LE+R + + + E++
Sbjct: 407 KIEELERQKVEIDHSEEKLEKRNQAMNKKFDRVNEKE 443
>At5g08600.1 68418.m01023 U3 ribonucleoprotein (Utp) family protein
contains Pfam profile: PF04615 Utp14 protein
Length = 822
Score = 27.9 bits (59), Expect = 6.9
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +1
Query: 358 EEAEKKRQAMLQAMKDASKTGPNFT--IQKKSENFGLSNAQLERNKTKEQLEEEKKISLS 531
EEA+K R+ L+ KDAS + + KK+E + +KE E+ ++ +
Sbjct: 710 EEAKKTREQALRKRKDASFKHVIISEKVDKKAEKLQTKSLPYPYT-SKEVFEQSMRMPIG 768
Query: 532 IRIKPLTIEGL 564
P TI G+
Sbjct: 769 PEFNPTTIVGV 779
>At3g03800.1 68416.m00390 syntaxin, putative (SYP131) similar to
SP|Q9ZSD4 Syntaxin 121 (AtSYP121) (Syntaxin-related
protein At-Syr1) {Arabidopsis thaliana}
Length = 306
Score = 27.9 bits (59), Expect = 6.9
Identities = 27/122 (22%), Positives = 58/122 (47%)
Frame = +1
Query: 331 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 510
+IE++ ++L++ K Q + K +K +I+++ E ++ R K ++EE
Sbjct: 44 EIEKQYEKLDKHLNKLQGAHEETKAVTKAPAMKSIKQRMERDVDEVGRISRF-IKGKIEE 102
Query: 511 EKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYHLEERQKRQDYDLKELKE 690
+ +L R KP +G VD+ R + K + ++ + +Q+Y +E+ E
Sbjct: 103 LDRENLENRTKPGCGKGTGVDRTRTATTIAVKKKFKDKISEFQTLRQNIQQEY--REVVE 160
Query: 691 RQ 696
R+
Sbjct: 161 RR 162
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = +2
Query: 77 RSRVREIQNSSSVKTRSG-RTWMNS*RNTSTN---GANSGPRRRMSSNALKRSR 226
RS +R ++ S KT SG +++ ++ ST+ A+ PR+R SN+ +RSR
Sbjct: 209 RSPLRGSRSRSISKTNSGSKSYSGERKSRSTSQSSDASISPRKRRLSNSRRRSR 262
>At1g48405.1 68414.m05407 hypothetical protein
Length = 297
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Frame = +1
Query: 430 TIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDK----LRQKAQE 597
T+Q+ + GL + ++++ E+ +L ++ L E + ++ +A +
Sbjct: 139 TLQEACKTIGLLKKLVMLLDMEKEVAVEETANLGHKLTSLLEENRELASEALFMKNEAVK 198
Query: 598 LWECIVKLETEKYHLEERQKRQDYDLKELKE 690
L C++K+ E +H + Q Y+L+ +E
Sbjct: 199 LARCVLKMRDEHFHKMCHLQNQIYELQSSRE 229
>At1g05320.1 68414.m00539 myosin-related similar to non-muscle
myosin II heavy chain (GI:19879404) [Loligo pealei];
ESTs gb|AA042402,gb|ATTS1380 come from this gene
Length = 828
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +1
Query: 334 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKT---KEQL 504
+E+K + LEE +K + A+ A + G +IQ + +S + N++ +L
Sbjct: 155 LEQKLKSLEELSEKVSELKSALIVAEEEGKKSSIQMQEYQEKVSKLESSLNQSSARNSEL 214
Query: 505 EEEKKISL 528
EE+ +I+L
Sbjct: 215 EEDLRIAL 222
>At5g42880.1 68418.m05226 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 751
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 613 VKLETEKYHLEERQKRQDYDLKELKERQKQ 702
+KLE EK EE+Q +QD +L +++ + +
Sbjct: 212 LKLELEKAEKEEQQAKQDSELAQMRVEEME 241
>At5g27230.1 68418.m03248 expressed protein ; expression supported
by MPSS
Length = 948
Score = 27.5 bits (58), Expect = 9.1
Identities = 19/74 (25%), Positives = 40/74 (54%)
Frame = +1
Query: 481 RNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYHLEERQKR 660
R+ +E+ +E + + SI++K L +E +K +EL C++ + E +K
Sbjct: 50 RSVLEERAKELEALEESIKVKALELE--------KKEKEL--CLIDESMKAKQSEFEKKE 99
Query: 661 QDYDLKELKERQKQ 702
+D+DL++ E +K+
Sbjct: 100 KDFDLEQKAEVEKR 113
>At5g15920.1 68418.m01862 structural maintenance of chromosomes (SMC)
family protein (MSS2) similar to SMC-related protein MSS2
[Arabidopsis thaliana] GI:9965743; contains Pfam profiles
PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1053
Score = 27.5 bits (58), Expect = 9.1
Identities = 30/108 (27%), Positives = 46/108 (42%)
Frame = +1
Query: 358 EEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIR 537
+E E K+Q + A +DA T + K E +E T E+LE + +LS
Sbjct: 778 KEVEGKQQRLATAKRDAESVA-TITPELKKEF-------MEMPTTVEELEAAIQDNLSQA 829
Query: 538 IKPLTIEGLSVDKLRQKAQELWECIVKLETEKYHLEERQKRQDYDLKE 681
L I + + + +++ KLET+K L K D LKE
Sbjct: 830 NSILFINENILQEYEHRQSQIYTISTKLETDKRDLSICMKEID-SLKE 876
>At1g65470.1 68414.m07427 chromatin assembly factor-1 (FASCIATA1)
(FAS1) identical to FAS1 [Arabidopsis thaliana]
GI:4887626
Length = 815
Score = 27.5 bits (58), Expect = 9.1
Identities = 20/74 (27%), Positives = 41/74 (55%)
Frame = +1
Query: 472 QLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYHLEER 651
++ER KE+L++EK+ L ++ VD+ K +E E +++ ++ E+
Sbjct: 265 RMERQVLKEKLQQEKEQKL--------LQKAIVDE-NNKEKEETESRKRIKKQQDESEKE 315
Query: 652 QKRQDYDLKELKER 693
QKR++ + ELK++
Sbjct: 316 QKRREKEQAELKKQ 329
>At1g13220.1 68414.m01533 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 391
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 64 ESRPSIAGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQ 180
E+R S+ + F K ++ +Q +EY+NEW K+
Sbjct: 247 ETRESVLQQERLSFTKERESYEGTFQKQ-REYLNEWEKK 284
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.307 0.125 0.331
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,408,167
Number of Sequences: 28952
Number of extensions: 178948
Number of successful extensions: 780
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1506636208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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