Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30928
         (777 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g26450.1 68417.m03805 expressed protein                             29   4.5  
At1g11680.1 68414.m01341 obtusifoliol 14-demethylase (CYP51) ide...    28   6.0  

>At4g26450.1 68417.m03805 expressed protein
          Length = 1248

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/41 (26%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +2

Query: 542 ETENKI--LAEEAGKVENVGTENEGIKVKGFYEYVGPGRCH 658
           +TEN+     + +GK ++ G EN+ ++     +Y+   +CH
Sbjct: 368 QTENRCETRGQSSGKADSTGDENDQVEDFALVQYIENSKCH 408


>At1g11680.1 68414.m01341 obtusifoliol 14-demethylase (CYP51)
           identical to obtusifoliol 14-demethylase (GI:14624983)
           [Arabidopsis thaliana]
          Length = 488

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/57 (26%), Positives = 24/57 (42%)
 Frame = +1

Query: 43  ALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAYN 213
           ++ A  GK        + +T   F  +      DP  YDP R + GR     +GA++
Sbjct: 366 SVTARDGKTYDIPKGHIVATSPAFANRLPHIFKDPDTYDPERFSPGREEDKAAGAFS 422


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,463,834
Number of Sequences: 28952
Number of extensions: 244525
Number of successful extensions: 765
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1736283200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)