Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30927
(812 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0347 + 22193708-22193720,22194317-22194390,22195388-221961... 60 3e-09
01_03_0114 - 12649104-12649141,12650137-12650245,12650500-126506... 59 5e-09
03_06_0352 - 33312443-33312652,33312747-33312854,33313224-333133... 57 2e-08
08_01_0217 + 1738321-1739104,1739683-1739915,1740002-1740292,174... 48 1e-05
07_01_0684 - 5161218-5161427,5161509-5161616,5162217-5162390,516... 47 2e-05
12_01_0949 - 9434951-9435131,9435555-9435682,9436493-9436666,943... 46 4e-05
07_01_0686 - 5184061-5184267,5184655-5184762,5185405-5185578,518... 43 3e-04
03_06_0354 - 33333634-33333840,33334106-33334213,33335384-333355... 42 8e-04
03_05_0761 - 27515441-27515650,27515967-27516074,27516666-275168... 42 8e-04
12_02_1096 + 26050224-26051058,26051599-26051831,26051940-260522... 40 0.003
08_02_0529 + 18236782-18236807,18237166-18237229,18237334-182373... 29 5.8
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 28 7.7
06_03_0860 + 25484826-25485758,25486155-25486406 28 7.7
05_02_0116 + 6773659-6774437,6775103-6775298,6775381-6775565,677... 28 7.7
>02_04_0347 +
22193708-22193720,22194317-22194390,22195388-22196132,
22196203-22196417,22196505-22196786,22196870-22196998,
22197088-22197267,22197538-22197645,22197888-22198094
Length = 650
Score = 59.7 bits (138), Expect = 3e-09
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Frame = +1
Query: 61 AQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVFKSAPQRFRSSKWRVSLEEY 240
A++ + TDDD ++ V + V + + G+L+ S P R SKW +S EE+
Sbjct: 492 AKYLMKTDDDAFVRVDEIHSSVKQLNVSH---GLLYGRINSDSGPHRNPESKWYISPEEW 548
Query: 241 PWDKWPPYVTAGAYVVSNKAMKML--YVGSLFVKHFRFDDIYLGIVAKKM 384
P +K+PP+ YVVS K + + + +K F+ +D+ +GI +M
Sbjct: 549 PEEKYPPWAHGPGYVVSQDIAKEINSWYETSHLKMFKLEDVAMGIWIAEM 598
>01_03_0114 -
12649104-12649141,12650137-12650245,12650500-12650691,
12650797-12650904,12650986-12651162,12652331-12652459,
12653314-12653589,12653667-12653916,12654909-12655561
Length = 643
Score = 58.8 bits (136), Expect = 5e-09
Identities = 29/105 (27%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Frame = +1
Query: 61 AQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVFKSAPQRFRSSKWRVSLEEY 240
A++ + TDDD ++ + ++ + S+ G+L+ F+S+P R + SKW +S +E+
Sbjct: 442 AKYIMKTDDDAFVRIDEVISSLKK----SDPHGLLYGLISFQSSPHRNKDSKWFISPKEW 497
Query: 241 PWDKWPPYVTAGAYVVSNKAMKMLYVG--SLFVKHFRFDDIYLGI 369
P + +PP+ Y+VS K + G ++ F+ +D+ +GI
Sbjct: 498 PVEAYPPWAHGPGYIVSRDIAKFIVHGHQERTLQLFKLEDVAMGI 542
>03_06_0352 -
33312443-33312652,33312747-33312854,33313224-33313397,
33313489-33313695,33313700-33313987,33314087-33314319,
33314450-33315263
Length = 677
Score = 56.8 bits (131), Expect = 2e-08
Identities = 38/155 (24%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Frame = +1
Query: 61 AQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVFKSAPQRFRSSKWRVSLEEY 240
A++ + DDD ++ + ++L V V ER+G ++ G + + RS KW VS EE+
Sbjct: 520 AKYIMKCDDDTFVRIDSVLDQVKKV----EREGSMYIGNI-NYYHRPLRSGKWSVSYEEW 574
Query: 241 PWDKWPPYVTAGAYVVSNKAMKMLYVGSLF----VKHFRFDDIYLGIVAKKMGIVPTHCP 408
+ +PPY YV+S+ + Y+ S F ++ F+ +D+ +G+ +K
Sbjct: 575 QEEVYPPYANGPGYVISSDIAQ--YIVSEFDNQTLRLFKMEDVSMGMWVEKFNSTRQPVK 632
Query: 409 HFHFYKKPYEREVYSDVIASHGYSNHDELIRVWNE 513
+ H K ++ + +H Y + ++I +W +
Sbjct: 633 YSHDVKF-FQSGCFDGYYTAH-YQSPQQMICLWRK 665
>08_01_0217 +
1738321-1739104,1739683-1739915,1740002-1740292,
1740524-1740616,1740912-1741040,1741522-1741695,
1741883-1741990,1742073-1742279
Length = 672
Score = 47.6 bits (108), Expect = 1e-05
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Frame = +1
Query: 13 IKTVMSFRWIFQHCAEAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVFKSA 192
+KT+ + Q+ A A H + DDD ++ V +++++ + L+ G +
Sbjct: 501 LKTIAICEYGVQNLA-AVHIMKCDDDTFVRVDVVVRHIK----LNNGGRPLYMGNL-NLL 554
Query: 193 PQRFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYV--GSLFVKHFRFDDIYLG 366
+ R KW V+ EE+P D +PPY YV+S K + + ++ F+ +D+ +G
Sbjct: 555 HRPLRMGKWTVTTEEWPEDIYPPYANGPGYVISGDIAKFVVSQHANQSLRLFKMEDVSMG 614
Query: 367 IVAKK 381
+ +K
Sbjct: 615 LWVEK 619
>07_01_0684 -
5161218-5161427,5161509-5161616,5162217-5162390,
5162515-5162643,5162722-5163009,5163114-5163346,
5164235-5165060
Length = 655
Score = 47.2 bits (107), Expect = 2e-05
Identities = 35/155 (22%), Positives = 72/155 (46%), Gaps = 4/155 (2%)
Frame = +1
Query: 61 AQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVFKSAPQRFRSSKWRVSLEEY 240
A++ + DDD ++ + ++L V V + D ++ G + + RS KW V+ EE+
Sbjct: 498 AKYIMKCDDDTFVRIDSVLDQVKKVRS----DKSVYVGSM-NYFHRPLRSGKWAVTYEEW 552
Query: 241 PWDKWPPYVTAGAYVVSNKAMKMLYVGSLF----VKHFRFDDIYLGIVAKKMGIVPTHCP 408
P + +P Y YV+S + Y+ S F ++ F+ +D+ +G+ +K
Sbjct: 553 PEEAYPNYANGPGYVISADIAR--YIVSEFDNQTLRLFKMEDVNMGMWVEKFNNTLRPVE 610
Query: 409 HFHFYKKPYEREVYSDVIASHGYSNHDELIRVWNE 513
+ H + Y+ + +H Y + +I +W +
Sbjct: 611 YRHDVRF-YQSGCFDGYFTAH-YQSPQHMICLWRK 643
>12_01_0949 -
9434951-9435131,9435555-9435682,9436493-9436666,
9436978-9437193,9437376-9437522
Length = 281
Score = 46.0 bits (104), Expect = 4e-05
Identities = 25/96 (26%), Positives = 45/96 (46%)
Frame = +1
Query: 7 NTIKTVMSFRWIFQHCAEAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVFK 186
N+ V F H A++ + DDD ++ + +++ V+ V + G+ F
Sbjct: 109 NSPNVVARFFVALVHVVSARYVMKCDDDTFVRLDSIITEVNKVQSGR---GLYIGNINFH 165
Query: 187 SAPQRFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSN 294
+ R KW V+ EE+P + +PPY YV+S+
Sbjct: 166 H--RSLRHGKWAVTYEEWPEEVYPPYANGPGYVISS 199
>07_01_0686 -
5184061-5184267,5184655-5184762,5185405-5185578,
5185680-5185808,5185891-5186178,5186341-5186570,
5186619-5187516
Length = 677
Score = 43.2 bits (97), Expect = 3e-04
Identities = 24/109 (22%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Frame = +1
Query: 49 HCAEAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVFKSAPQRFRSSKWRVS 228
H A++ + DDD ++ + +++ V+ V + + G + + R KW V+
Sbjct: 517 HVVSARYVMKCDDDTFVRLDSIITEVNKVQSGRS----FYIGNI-NIHHRPLRHGKWAVT 571
Query: 229 LEEYPWDKWPPYVTAGAYVVSNKAMKMLY--VGSLFVKHFRFDDIYLGI 369
EE+P + +PPY YV+S+ + ++ F+ +D+ +G+
Sbjct: 572 YEEWPEEVYPPYANGPGYVISSDIAGAIVSEFRDQKLRLFKMEDVSMGL 620
>03_06_0354 -
33333634-33333840,33334106-33334213,33335384-33335557,
33335637-33335765,33335858-33336145,33336257-33336489,
33336607-33337435
Length = 655
Score = 41.5 bits (93), Expect = 8e-04
Identities = 35/156 (22%), Positives = 71/156 (45%), Gaps = 5/156 (3%)
Frame = +1
Query: 61 AQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYV-FKSAPQRFRSSKWRVSLEE 237
A++ + DDD ++ +++ V D R L+ G + + P R+ KW V+ EE
Sbjct: 499 ARYIMKCDDDNFVRLES----VKDELKKIPRGKSLYVGNMNYHHKP--LRTGKWAVTYEE 552
Query: 238 YPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKH----FRFDDIYLGIVAKKMGIVPTHC 405
+P + +P Y YV+S+ + S F H F+ +D+ +G+ ++ H
Sbjct: 553 WPEEDYPTYANGPGYVISSDIAASIV--SEFTAHKLRLFKMEDVSMGMWVERFNNT-RHV 609
Query: 406 PHFHFYKKPYEREVYSDVIASHGYSNHDELIRVWNE 513
+ H K + D +H Y + +++ +W++
Sbjct: 610 QYVHSIKF-CQFGCIDDYYTAH-YQSPRQMLCLWDK 643
>03_05_0761 -
27515441-27515650,27515967-27516074,27516666-27516839,
27517185-27517469,27517688-27517920,27519422-27520139
Length = 575
Score = 41.5 bits (93), Expect = 8e-04
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Frame = +1
Query: 61 AQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVFKSAPQRFRSSKWRVSLEEY 240
A++ + DDD ++ + +++ +DV + P R KW VS EE+
Sbjct: 418 AKYIMKCDDDTFVRLDSVM---ADVRKIPYGKSFYLGNINYYHRP--LREGKWAVSFEEW 472
Query: 241 PWDKWPPYVTAGAYVVS----NKAMKMLYVGSLFVKHFRFDDIYLGI 369
P + +PPY Y+VS N + + G L + F+ +D+ +G+
Sbjct: 473 PREAYPPYANGPGYIVSSDIANFVVSEMEKGRLNL--FKMEDVSMGM 517
>12_02_1096 +
26050224-26051058,26051599-26051831,26051940-26052230,
26052860-26052988,26053082-26053255,26053334-26053547,
26053881-26053968,26054195-26054239,26056969-26057015,
26057441-26057727,26057812-26058051,26058141-26058257
Length = 899
Score = 39.5 bits (88), Expect = 0.003
Identities = 27/93 (29%), Positives = 45/93 (48%)
Frame = +1
Query: 13 IKTVMSFRWIFQHCAEAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVFKSA 192
+KTV + Q+ A++ + DDD ++ + +LK +S R L+ G +
Sbjct: 487 LKTVAICEFGVQNVT-AEYIMKCDDDTFVRLDVVLKQIS----VYNRTMPLYMGNL-NLL 540
Query: 193 PQRFRSSKWRVSLEEYPWDKWPPYVTAGAYVVS 291
+ R KW V+ EE+P +PPY YV+S
Sbjct: 541 HRPLRHGKWAVTYEEWPEFVYPPYANGPGYVIS 573
>08_02_0529 +
18236782-18236807,18237166-18237229,18237334-18237383,
18237588-18237781,18238323-18238386,18238459-18238531,
18238882-18239005,18239491-18239578,18239649-18239714,
18239818-18239889,18239999-18240111,18240580-18240620,
18241782-18241913
Length = 368
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/107 (20%), Positives = 47/107 (43%), Gaps = 4/107 (3%)
Frame = +1
Query: 58 EAQHYLFTDDDMYISVQNLLKYVSDVTTASE-RDGILFAGYVFKSAPQRFRSSKWRVSLE 234
+A+ Y +DD+YI+V L + + G + +G VF + + R+ KW E
Sbjct: 183 DAEFYAKVNDDIYINVDTLSAMLKEHWDKPRVYIGCMKSGEVFSESFPKNRTHKW-YEPE 241
Query: 235 EYPWDKWPPY---VTAGAYVVSNKAMKMLYVGSLFVKHFRFDDIYLG 366
+ + Y + +V+S + + + ++ + DD+ +G
Sbjct: 242 WWKFGDGKTYFRHASGEMFVISKAVAQFISINRSVLRTYAHDDVSVG 288
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 286 PRTPRPSRKAATCPRDTPPRTPATCSTGTVAA 191
P P PSR T P+ PP P TG V+A
Sbjct: 333 PPPPPPSRFNNTTPKPPPPPPPPEPPTGPVSA 364
>06_03_0860 + 25484826-25485758,25486155-25486406
Length = 394
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -2
Query: 295 CLTPRTPRPSRKAATCPRDTPPRTPATCSTG 203
CLTPR P S + P TPA CSTG
Sbjct: 128 CLTPRPP--SVRPVVASSLLPYTTPAKCSTG 156
>05_02_0116 +
6773659-6774437,6775103-6775298,6775381-6775565,
6775746-6776079,6776174-6776378,6776692-6776834,
6777081-6777233
Length = 664
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +1
Query: 325 LFVKHFRFDDIYLGIVAKKMGIVPTHCPHFHFYKKPYEREVYSDVI 462
LF++ F I LG + K I P HC H H KP R ++VI
Sbjct: 569 LFLERI-FHFIILGTILLK--IFPFHCFHVHHAAKPQSRPWTNEVI 611
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,347,121
Number of Sequences: 37544
Number of extensions: 374588
Number of successful extensions: 1261
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1259
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -