Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30927
(812 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44965| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 8e-13
SB_24354| Best HMM Match : Galactosyl_T (HMM E-Value=5.6e-23) 69 3e-12
SB_33068| Best HMM Match : Galactosyl_T (HMM E-Value=5.9e-37) 69 3e-12
SB_17008| Best HMM Match : Galactosyl_T (HMM E-Value=3.6e-30) 67 1e-11
SB_17120| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_44966| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 5e-10
SB_24592| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_52114| Best HMM Match : Galactosyl_T (HMM E-Value=3.5e-25) 60 3e-09
SB_1848| Best HMM Match : Galactosyl_T (HMM E-Value=1.4e-26) 59 4e-09
SB_44855| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 8e-09
SB_10898| Best HMM Match : Galactosyl_T (HMM E-Value=1.9e-22) 58 1e-08
SB_15525| Best HMM Match : Galactosyl_T (HMM E-Value=1.1e-31) 57 1e-08
SB_54195| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_48704| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 6e-08
SB_5014| Best HMM Match : Galactosyl_T (HMM E-Value=1.5e-07) 55 8e-08
SB_4002| Best HMM Match : Galactosyl_T (HMM E-Value=3.1e-24) 52 7e-07
SB_4455| Best HMM Match : Galactosyl_T (HMM E-Value=0.024) 51 1e-06
SB_51390| Best HMM Match : Galactosyl_T (HMM E-Value=2.9e-23) 48 9e-06
SB_48592| Best HMM Match : Galactosyl_T (HMM E-Value=1.5e-26) 46 5e-05
SB_54275| Best HMM Match : Galactosyl_T (HMM E-Value=2.4e-20) 43 3e-04
SB_1495| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_20666| Best HMM Match : Galactosyl_T (HMM E-Value=5.2e-05) 40 0.002
SB_42243| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.039
SB_50849| Best HMM Match : Galactosyl_T (HMM E-Value=0.066) 34 0.12
SB_59514| Best HMM Match : LRR_1 (HMM E-Value=0.16) 31 0.84
SB_40587| Best HMM Match : DEP (HMM E-Value=7.4e-16) 31 1.1
SB_39802| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_15526| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_39747| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_51905| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 7.8
SB_24794| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_10855| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
>SB_44965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1114
Score = 71.3 bits (167), Expect = 8e-13
Identities = 39/129 (30%), Positives = 64/129 (49%)
Frame = +1
Query: 4 NNTIKTVMSFRWIFQHCAEAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVF 183
N T+KT++ RW +HC +AQ+ L TD D +++V L++ + R + +
Sbjct: 201 NLTLKTILILRWAKKHCPQAQYILKTDHDCFVNVLPLMRLLRI------RKPLYLGRIHW 254
Query: 184 KSAPQRFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFRFDDIYL 363
K+ P R ++SK+ VS E+ +PPY G YV + L S F +D Y
Sbjct: 255 KNTPTRNKTSKFYVSKAEFSEPVYPPYAAGGGYVFKGSLLPSLLQASHEAAVFPMEDAYF 314
Query: 364 GIVAKKMGI 390
G + K +G+
Sbjct: 315 GSLMKVIGV 323
>SB_24354| Best HMM Match : Galactosyl_T (HMM E-Value=5.6e-23)
Length = 396
Score = 69.3 bits (162), Expect = 3e-12
Identities = 41/136 (30%), Positives = 72/136 (52%), Gaps = 1/136 (0%)
Frame = +1
Query: 10 TIKTVMSFRWIFQHCAEAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVFKS 189
++K ++ W ++HC A++ L TDDD Y+++ +L+ ++S+ T D L+ G V K+
Sbjct: 195 SLKMLLGITWPYEHC-NAKYILKTDDDCYMNIVSLILWLSEYHTQQGTDP-LYIGKVQKN 252
Query: 190 -APQRFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFRFDDIYLG 366
A R +S ++ VS + D + PYV+ G Y+ S + LY S + F +D LG
Sbjct: 253 MAVVRTKSHRYYVSRSVHRGDFYAPYVSGGGYLFSGHLLSRLYKVSRHSRVFPVEDALLG 312
Query: 367 IVAKKMGIVPTHCPHF 414
+ + + P H F
Sbjct: 313 RFMRILKVQPRHEKRF 328
>SB_33068| Best HMM Match : Galactosyl_T (HMM E-Value=5.9e-37)
Length = 646
Score = 69.3 bits (162), Expect = 3e-12
Identities = 37/134 (27%), Positives = 72/134 (53%), Gaps = 2/134 (1%)
Frame = +1
Query: 1 FNNTIKTVM-SFRWIFQHCAEAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGY 177
+ N ++ + SF W + Q+ L DDD+Y+++ L+ ++ + ++AG+
Sbjct: 464 YRNLVEKIQGSFEWALS--VKPQYILKADDDVYVNMPKLISWLHSPRIPPK----IYAGF 517
Query: 178 V-FKSAPQRFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFRFDD 354
V +++ QR S +W VS +P ++PPY Y+ S ++ ++ SL K F +D
Sbjct: 518 VHYRAFIQRDPSHRWFVSRSLFPEGRFPPYCGGPFYLFSGNILQKIHKASLKQKRFAVED 577
Query: 355 IYLGIVAKKMGIVP 396
Y G++A+++GI P
Sbjct: 578 AYFGVLARRIGIRP 591
>SB_17008| Best HMM Match : Galactosyl_T (HMM E-Value=3.6e-30)
Length = 508
Score = 67.3 bits (157), Expect = 1e-11
Identities = 39/134 (29%), Positives = 71/134 (52%), Gaps = 2/134 (1%)
Frame = +1
Query: 1 FNNTIKTVM-SFRWIFQHCAEAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGY 177
+ N + V SF+W + + ++ L DDD+Y++ LL ++ + + + L+AG+
Sbjct: 203 YKNLVGKVQDSFKWALR--VQPKYILKADDDVYVNFPRLLNWLHEPSIPEK----LYAGF 256
Query: 178 VFKSA-PQRFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFRFDD 354
V A R SSKW VS +++P +P Y Y+ S +K +++ SL F+ +D
Sbjct: 257 VHHRAFIHRNPSSKWYVSKKDFPEKYFPNYCAGPFYIFSGNILKDVHMESLKKPRFQVED 316
Query: 355 IYLGIVAKKMGIVP 396
Y G +A+ +G+ P
Sbjct: 317 AYFGWLARSVGVTP 330
>SB_17120| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 399
Score = 64.1 bits (149), Expect = 1e-10
Identities = 36/128 (28%), Positives = 61/128 (47%)
Frame = +1
Query: 16 KTVMSFRWIFQHCAEAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVFKSAP 195
K V+ W +C A + L TDDD Y+SVQ L+ ++ + + S
Sbjct: 176 KMVLGIEWPQNNCP-ADYILKTDDDCYVSVQALITWLDSYHVINASQPLYTGNLALHSKA 234
Query: 196 QRFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFRFDDIYLGIVA 375
R S + +S ++YP +++P Y++ G Y+ S + L GS VK F +D G +
Sbjct: 235 IRDSSHRNYLSRDQYPEEEFPAYISGGGYLFSAFLLPRLISGSKRVKMFPVEDACFGTIM 294
Query: 376 KKMGIVPT 399
++ + PT
Sbjct: 295 NEIRVRPT 302
>SB_44966| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 413
Score = 62.1 bits (144), Expect = 5e-10
Identities = 36/129 (27%), Positives = 59/129 (45%)
Frame = +1
Query: 16 KTVMSFRWIFQHCAEAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVFKSAP 195
K V+ RW C A + L TDDD YI+ L+ ++ + + V
Sbjct: 176 KMVLGIRWAHTFCT-ADYILKTDDDCYINAHALITWLDSYHMVNASQPLYTGRLVEDRRV 234
Query: 196 QRFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFRFDDIYLGIVA 375
R + + +S+EEYP ++P Y+ G Y+ S + L GS VK F +D G +
Sbjct: 235 IRDKEDRNYLSMEEYPDAEFPAYIAGGGYLFSGFLLLRLISGSKRVKMFPVEDACFGTIM 294
Query: 376 KKMGIVPTH 402
++ + PT+
Sbjct: 295 NEIRVRPTN 303
>SB_24592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 60.1 bits (139), Expect = 2e-09
Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 7/156 (4%)
Frame = +1
Query: 1 FNNTI-KTVMSFRWIFQHCAEAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGY 177
+NN I KT MS RW + + L TDDD+Y+ + N+ + + + +R + G
Sbjct: 148 YNNLIIKTFMSHRWTVT--LKCKFVLKTDDDVYVRL-NVFTHWLRLQGSPDR---FYGGD 201
Query: 178 VFKSAPQ-RFRSSKWR---VSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFR 345
+FK R R SKWR +S + + +PPY +V+S+ + L + + F
Sbjct: 202 IFKDYRVIRDRCSKWRKWAISKAYFSENFYPPYCGGPFHVISSDIVPYLLSYTSLRRPFH 261
Query: 346 FDDIYLGIVAKKMGIVPTHCPHF--HFYKKPYEREV 447
DD Y+GI + +G+ P F ++Y K RE+
Sbjct: 262 VDDAYIGIAMRDLGVEAIGIPGFAANYYYKTIRREI 297
>SB_52114| Best HMM Match : Galactosyl_T (HMM E-Value=3.5e-25)
Length = 383
Score = 59.7 bits (138), Expect = 3e-09
Identities = 37/142 (26%), Positives = 69/142 (48%)
Frame = +1
Query: 1 FNNTIKTVMSFRWIFQHCAEAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYV 180
FN + K M F W ++C+ L +DDD++++ +L+Y++ S L+ G +
Sbjct: 209 FNMSYKVAMGFEWAMRYCS-FDFMLKSDDDVFVNPYAMLQYLAKSAPRSN----LYMGNL 263
Query: 181 FKSAPQRFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFRFDDIY 360
++P RS ++ VS +E + PY + G ++S+ ++ + DD Y
Sbjct: 264 MINSPV-LRSGRYAVSGQELSKTYFEPYCSGGGILMSSDVVRKFMEFYDVQAPLKIDDAY 322
Query: 361 LGIVAKKMGIVPTHCPHFHFYK 426
LG +AKK G+ +F Y+
Sbjct: 323 LGELAKKAGVPVKENGNFRMYE 344
>SB_1848| Best HMM Match : Galactosyl_T (HMM E-Value=1.4e-26)
Length = 308
Score = 59.3 bits (137), Expect = 4e-09
Identities = 37/142 (26%), Positives = 68/142 (47%)
Frame = +1
Query: 1 FNNTIKTVMSFRWIFQHCAEAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYV 180
FN + K M F W ++C L +DDD++++ +L+Y++ S L+ G +
Sbjct: 134 FNMSYKVAMGFEWAMRYCP-FDFMLKSDDDVFVNPYAMLQYLAKSAPRSN----LYMGNL 188
Query: 181 FKSAPQRFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFRFDDIY 360
++P RS ++ VS +E + PY + G ++S+ ++ + DD Y
Sbjct: 189 MINSPV-LRSGRYAVSEQELSKTYFEPYCSGGGILMSSDVVRKFMEFYDVQAPLKIDDAY 247
Query: 361 LGIVAKKMGIVPTHCPHFHFYK 426
LG +AKK G+ +F Y+
Sbjct: 248 LGELAKKAGVPVKENGNFRMYE 269
>SB_44855| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 247
Score = 58.0 bits (134), Expect = 8e-09
Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Frame = +1
Query: 1 FNN-TIKTVMSFRWIFQHCAEAQHYLFTDDDMYISVQNLLKYV-SDVTTASERDGILFAG 174
+NN +KT MS W + + ++ L TD+D+YI + L+ ++ S + A G ++ G
Sbjct: 57 YNNLVVKTFMSHLWTLR--LKCKYVLKTDEDVYIRLPVLISWLRSQGSPARFYGGHVYEG 114
Query: 175 YVFKSAPQRFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFRFDD 354
Y P SSKW +S +P +PP+ +V+S+ + + + F DD
Sbjct: 115 YRAIRDPC---SSKWAISKAYFPDYYFPPFCGGAFHVISSDVVPDIVWYTSQRPPFHLDD 171
Query: 355 IYLGIVAKKMGIVPTHCPHFH 417
Y+G+VA+ + I + P F+
Sbjct: 172 AYIGVVARDLRIQAVNIPGFN 192
>SB_10898| Best HMM Match : Galactosyl_T (HMM E-Value=1.9e-22)
Length = 301
Score = 57.6 bits (133), Expect = 1e-08
Identities = 33/132 (25%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Frame = +1
Query: 4 NNTIKTVMSFRWIFQHCAEAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYV- 180
N +K +F+W Q + ++ L DDD+Y + + ++ +T L+AGYV
Sbjct: 159 NIVVKVFYAFKWALQF--KPKYILKVDDDVYAHIPRFVSWLRKSSTPKR----LYAGYVH 212
Query: 181 FKSAPQRFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFRFDDIY 360
F + R ++ VS +++P K+P Y Y++S ++ + V FR +D +
Sbjct: 213 FNAYISRNPKNQHYVSKKQFPEKKFPNYCAGPCYIISGNLLEEFTKQAKKVPIFRVEDAF 272
Query: 361 LGIVAKKMGIVP 396
+G++A++ + P
Sbjct: 273 MGLLARQSKVKP 284
>SB_15525| Best HMM Match : Galactosyl_T (HMM E-Value=1.1e-31)
Length = 522
Score = 57.2 bits (132), Expect = 1e-08
Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 1/138 (0%)
Frame = +1
Query: 4 NNTIKTVMSFRWIFQHCAEAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVF 183
N IK M F+W ++ +++ L DDD YI + L + V ER F GYV
Sbjct: 274 NLIIKVYMGFKWAREN-VKSRFILKGDDDTYIYLPRLTNILQSVP---ER---FFGGYVM 326
Query: 184 KSAP-QRFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFRFDDIY 360
+A R ++K +S + D +PPY YV ++ + + K F +D Y
Sbjct: 327 TNAQVYRDVNNKHGISKPFFGEDVYPPYCGGPFYVFTSNLLPDFIRLTYHFKPFHIEDAY 386
Query: 361 LGIVAKKMGIVPTHCPHF 414
+GI+ + MGI P P F
Sbjct: 387 MGILLRHMGIRPVFIPGF 404
>SB_54195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 56.4 bits (130), Expect = 3e-08
Identities = 37/142 (26%), Positives = 66/142 (46%)
Frame = +1
Query: 1 FNNTIKTVMSFRWIFQHCAEAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYV 180
FN + K M F W ++C L +DDD++++ +L+Y++ S L+ G
Sbjct: 138 FNMSYKVAMGFEWAMRYCP-FDFMLKSDDDVFVNPYAMLQYLAKSAPRSN----LYMGNP 192
Query: 181 FKSAPQRFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFRFDDIY 360
+P RS ++ VS +E + PY + G ++S+ ++ + DD Y
Sbjct: 193 MIFSPV-LRSGRYAVSEQELNKTYFEPYCSGGGILMSSDVVRKFMEFYDVQAPLKIDDAY 251
Query: 361 LGIVAKKMGIVPTHCPHFHFYK 426
LG +AKK G+ +F Y+
Sbjct: 252 LGELAKKAGVPVKENGNFRMYE 273
>SB_48704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1044
Score = 55.2 bits (127), Expect = 6e-08
Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 1/153 (0%)
Frame = +1
Query: 4 NNTIKTVMSFRWIFQHCAEAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVF 183
N IKT+MS W + + L DDD+YI V +++ ++ A + G ++
Sbjct: 862 NLIIKTMMSHLWASS--LDCCYILKADDDVYIRVPSVIAWLK----ARRSHSRFYGGDIY 915
Query: 184 KSAP-QRFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFRFDDIY 360
++ R S W +S + YP+ +WPP+ +++S + + + F DD Y
Sbjct: 916 TNSEISRDPCSPWGISKKYYPYFEWPPFCYGLFHILSADVVPEILNHTRTRIPFHTDDAY 975
Query: 361 LGIVAKKMGIVPTHCPHFHFYKKPYEREVYSDV 459
+G+ A + I P F KK E ++D+
Sbjct: 976 VGVAADDLNINAVQIPGFE--KKELFAEFWNDL 1006
>SB_5014| Best HMM Match : Galactosyl_T (HMM E-Value=1.5e-07)
Length = 194
Score = 54.8 bits (126), Expect = 8e-08
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 1/153 (0%)
Frame = +1
Query: 4 NNTIKTVMSFRWIFQHCAEAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVF 183
N IKT+MS W + + L DDD+YI V ++ ++ A + G ++
Sbjct: 12 NLIIKTMMSHLWASS--LDCCYILKADDDVYIRVPRVIAWLK----ARRSHSRFYGGDIY 65
Query: 184 KSAP-QRFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFRFDDIY 360
++ R S W +S + YP+ +WPP+ +++S + + + F DD Y
Sbjct: 66 TNSEISRDPCSPWGISKKYYPYFEWPPFCYGLFHILSADVVPEILNHTRTRIPFHTDDAY 125
Query: 361 LGIVAKKMGIVPTHCPHFHFYKKPYEREVYSDV 459
+G+ A + I P F KK E ++D+
Sbjct: 126 VGVAADDLNINAVQIPGFE--KKELFAEFWNDL 156
>SB_4002| Best HMM Match : Galactosyl_T (HMM E-Value=3.1e-24)
Length = 683
Score = 51.6 bits (118), Expect = 7e-07
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
Frame = +1
Query: 4 NNTIKTVMSFRWIFQHCAEAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYV- 180
N K +FRW + + ++ + D D+Y+++ ++ + L+AGY+
Sbjct: 174 NLVFKVWDAFRWSIIY--QPKYIIKVDHDVYVNLPKFFSWIREDNIPH----FLYAGYLH 227
Query: 181 FKSAPQRFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFRFDDIY 360
F + R S VS +E+ K+P Y Y+VS M+ + S V F+ +D Y
Sbjct: 228 FNAYIYRNNDSAHFVSEDEFQGKKFPDYCGGPCYIVSGNLMQEMVKQSKNVPMFKVEDAY 287
Query: 361 LGIVAKKMG 387
G+VA +G
Sbjct: 288 TGVVAHTLG 296
>SB_4455| Best HMM Match : Galactosyl_T (HMM E-Value=0.024)
Length = 157
Score = 51.2 bits (117), Expect = 1e-06
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Frame = +1
Query: 85 DDMYISVQNLLKYVSDVTTASE-RDGILFAGYVFKSAPQRFRSSKWRVSLEEYPWDKWPP 261
DD+Y+ V +L+ ++ + G ++ GY+ R + KW +S Y +PP
Sbjct: 2 DDVYVKVPSLIAWLVRTRRRTRFYGGHVYTGYIVG----RVKGHKWSISKRYYEQHIFPP 57
Query: 262 YVTAGAYVVSNKAMKMLYVGSLFVKHFRFDDIYLGIVAKKMGIVPTHCPHFHFY 423
+ +VVS + ++ + + F DD YLG+ A +GI F+ Y
Sbjct: 58 FCAGAFHVVSADVVALMVNHTKVRRPFHMDDAYLGVAASDLGIKAVRISGFNAY 111
>SB_51390| Best HMM Match : Galactosyl_T (HMM E-Value=2.9e-23)
Length = 367
Score = 48.0 bits (109), Expect = 9e-06
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 2/111 (1%)
Frame = +1
Query: 70 YLF-TDDDMYISVQNLLKYVSDVTTASERDGILFAGYV-FKSAPQRFRSSKWRVSLEEYP 243
Y+F DDD+Y+++ L+ ++ E L+AGYV +K +R + W V+ +
Sbjct: 201 YIFKADDDIYVNIPRLIHWLKTDQNIKEN---LYAGYVVYKQKIERDEENDWFVNSTDLQ 257
Query: 244 WDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFRFDDIYLGIVAKKMGIVP 396
+P Y Y+ S ++ L + + F +D Y+G+V + + P
Sbjct: 258 QGTYPNYCIGPYYIFSGNLLEGLIHAASKRQKFPVEDAYMGVVMRDNYVTP 308
>SB_48592| Best HMM Match : Galactosyl_T (HMM E-Value=1.5e-26)
Length = 492
Score = 45.6 bits (103), Expect = 5e-05
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 4/135 (2%)
Frame = +1
Query: 4 NNTIKTVMSFRWI-FQHCAEAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYV 180
N +K ++ W Q+C + L DDD+YI++ LL ++ + + L+AG V
Sbjct: 122 NLVLKVFVALNWARTQNCT---YVLKADDDVYINIPRLLNWLRNPSLPEP----LYAGEV 174
Query: 181 FK-SAPQRFRS-SKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMK-MLYVGSLFVKHFRFD 351
+ + R+ SK+R+ + Y + +PPY YV+S A+ ++ + +
Sbjct: 175 VEGNRVLRWPPWSKYRIPRDVYNEEIYPPYCRGAFYVLSRSALPGIMQEVNKHSTLLPME 234
Query: 352 DIYLGIVAKKMGIVP 396
D YLGI+A+ + P
Sbjct: 235 DAYLGIMARSASLSP 249
>SB_54275| Best HMM Match : Galactosyl_T (HMM E-Value=2.4e-20)
Length = 767
Score = 43.2 bits (97), Expect = 3e-04
Identities = 27/133 (20%), Positives = 62/133 (46%), Gaps = 5/133 (3%)
Frame = +1
Query: 7 NTIKTVMSFRWIFQHCAEAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVFK 186
+++K +++F+W C ++ L + +++V ++++ S L+ G+
Sbjct: 226 HSVKALLAFKWATLSC-RSKFILKVLTESFVNVPATMEWLRSKKPESSDVRGLYTGFCHG 284
Query: 187 -----SAPQRFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFRFD 351
+A R + S W ++ EE+P + PPY + +S + L S +
Sbjct: 285 HDTGGAAVIRNKESPWYITEEEWPEGRLPPYASGMGIAMSFDVVSRLVKLSTEGSTLHIE 344
Query: 352 DIYLGIVAKKMGI 390
D+++GI+ KK+ +
Sbjct: 345 DVHIGILMKKLSL 357
>SB_1495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 461
Score = 43.2 bits (97), Expect = 3e-04
Identities = 27/133 (20%), Positives = 62/133 (46%), Gaps = 5/133 (3%)
Frame = +1
Query: 7 NTIKTVMSFRWIFQHCAEAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVFK 186
+++K +++F+W C ++ L + +++V ++++ S L+ G+
Sbjct: 226 HSVKALLAFKWATLSC-RSKFILKVLTESFVNVPATMEWLRSKKPESSDVRGLYTGFCHG 284
Query: 187 -----SAPQRFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFRFD 351
+A R + S W ++ EE+P + PPY + +S + L S +
Sbjct: 285 HDTGGAAVIRNKESPWYITEEEWPEGRLPPYASGMGIAMSFDVVSRLVKLSTEGSTLHIE 344
Query: 352 DIYLGIVAKKMGI 390
D+++GI+ KK+ +
Sbjct: 345 DVHIGILMKKLSL 357
>SB_20666| Best HMM Match : Galactosyl_T (HMM E-Value=5.2e-05)
Length = 421
Score = 39.9 bits (89), Expect = 0.002
Identities = 31/114 (27%), Positives = 53/114 (46%)
Frame = +1
Query: 4 NNTIKTVMSFRWIFQHCAEAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVF 183
N + K ++ ++W + A L TDDD Y+ + +L +SD + R I F+G F
Sbjct: 218 NLSHKMMLFYKWATDNVA-FNFTLKTDDDCYLDIDKILAALSDFNLRN-RQKIWFSG--F 273
Query: 184 KSAPQRFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFR 345
++ R KWR EY +P + ++S +K L S +KH++
Sbjct: 274 RTDWPVERHGKWRE--PEYTSSVYPAFACGAGNMLSADLVKWLAQNSGRLKHYQ 325
>SB_42243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 762
Score = 35.9 bits (79), Expect = 0.039
Identities = 27/122 (22%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
Frame = +1
Query: 10 TIKTVMSFRWIFQHCAEAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVFKS 189
++K + + +WI + + + L DDD ++ + L V+++ T +D L+ G+ F+
Sbjct: 93 SLKVLETIKWIDSN-VDCSYVLKVDDDSFVRLDLL---VNELKTVYNQDN-LYWGF-FRG 146
Query: 190 APQRFRSSKWRVSLEEYPW---DKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFRFDDIY 360
+ W E W D + PY G YV+++K ++ + S ++ + +D+
Sbjct: 147 DANVKKRGPWA----EKNWILCDHYLPYADGGGYVLASKLVRFVARNSELLQLYNSEDVS 202
Query: 361 LG 366
+G
Sbjct: 203 VG 204
>SB_50849| Best HMM Match : Galactosyl_T (HMM E-Value=0.066)
Length = 147
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +1
Query: 163 LFAGYVFKSAPQ-RFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKH 339
L+AG + A R + ++ VS E+ +P Y + YV S ++ L S +
Sbjct: 13 LYAGKLINHARVIRDKKDEFYVSWNEFSETFYPDYCSGEIYVFSGNILEKLIRLSSSIAM 72
Query: 340 FRFDDIYLGIVAKKMGIVP 396
F +D Y G++ + I P
Sbjct: 73 FEVEDAYFGLLVHRADITP 91
>SB_59514| Best HMM Match : LRR_1 (HMM E-Value=0.16)
Length = 320
Score = 31.5 bits (68), Expect = 0.84
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Frame = +1
Query: 292 NKAMKMLYVGSLFVKHFRFDDIYLGIVAKK--MGIVPTHCP---HFHFYKKPYEREVYSD 456
+ A++ L++ + V F+D++ + KK ++ P H+HF K P + D
Sbjct: 217 HSALETLHLAEVEVTS-AFEDLFWRVKVKKPLFRVLEMSSPGGDHYHFQKPPSALAMLDD 275
Query: 457 VIASHGYSNHDELIRVWNEQNAL*LRTKLSY 549
+ +G+SN + W L LR +++
Sbjct: 276 YLQRNGFSNETDEQTSWLTNRRLELRHHVTF 306
>SB_40587| Best HMM Match : DEP (HMM E-Value=7.4e-16)
Length = 625
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +1
Query: 403 CPHFHFYKKPYEREVYSDVIASHGY-SNHDELIRVWNEQNAL*LRTKLSYESRVYSLAAR 579
C +K P E+ D A+ Y S +DE + N+ ++ Y + V S + R
Sbjct: 300 CEEVSSWKPPESAEINGDRFATANYVSKNDESFVINNKNGIYDTKSSPQYRTSVLSNSLR 359
Query: 580 TTKRCDTSLE 609
++ CD+ E
Sbjct: 360 SSSGCDSEQE 369
>SB_39802| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 29.5 bits (63), Expect = 3.4
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +1
Query: 10 TIKTVMSFRWIFQHCAEAQHYLFTDDDMYISVQNLL 117
T + ++ + W++QH + ++L DDD ++ + LL
Sbjct: 6 TERLLLVWEWVYQHNIQFDYFLRIDDDHFLCLGRLL 41
>SB_15526| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 187
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/54 (24%), Positives = 25/54 (46%)
Frame = +1
Query: 238 YPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFRFDDIYLGIVAKKMGIVPT 399
Y ++PPY G Y + + + + F +D YLGI+ + + + P+
Sbjct: 4 YSEKRYPPYCGGGFYAFTKNLLPDFIRLTTRFRPFHVEDAYLGILLRHINVRPS 57
>SB_39747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 28.7 bits (61), Expect = 5.9
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = +1
Query: 136 TTASERDGILFAGYVFKSAPQRFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLY 315
T S GI + +A QR S S+ +PW K PP V GA+ K + +L
Sbjct: 106 TPGSRAGGITVGERPYSAATQRTNCS----SVCAHPWTKKPPPVDDGAFKRRLKLISIL- 160
Query: 316 VGSLFVKHFRFDD 354
G+L + F+D
Sbjct: 161 EGALSTLNKTFED 173
>SB_51905| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 928
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = -1
Query: 692 HNQLTRXXXXLHIYSHMN*YQME*KRNVSKDVSHRFVVRAASE*TRDSYDNLVLNHNA 519
H + R +++H+ +Q+ + NVS R V T DS D +++++ A
Sbjct: 329 HLERGRLTCGARVFTHLKKHQLNHEGNVSYSYGRRKVTSKEYSDTEDSDDTIIIDYQA 386
>SB_24794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 279
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 259 AATCPRDTPPRTPATCSTGTVA 194
AA+ P TPP TP T +T TV+
Sbjct: 39 AASSPSHTPPGTPTTPTTSTVS 60
>SB_10855| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 151 RDGILFAGYVFKSAPQRFRSSKWRVSLEEYPWDKWPPYVTAGAYVV 288
R GI+F + F+S+ R R R+ ++ + YV G+Y+V
Sbjct: 121 RKGIVFKSFRFRSSFSRLRVDDTRIRNKKVAFSNENGYVGTGSYLV 166
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,855,215
Number of Sequences: 59808
Number of extensions: 454769
Number of successful extensions: 1442
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1430
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2263654701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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