Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30927
(812 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g06440.1 68416.m00745 galactosyltransferase family protein co... 58 9e-09
At1g26810.1 68414.m03267 galactosyltransferase family protein co... 56 2e-08
At4g21060.1 68417.m03045 galactosyltransferase family protein co... 51 8e-07
At5g62620.1 68418.m07859 galactosyltransferase family protein co... 48 7e-06
At1g27120.1 68414.m03305 galactosyltransferase family protein co... 47 2e-05
At1g74800.1 68414.m08666 galactosyltransferase family protein co... 43 3e-04
At5g24910.1 68418.m02949 cytochrome P450 family protein similar ... 35 0.056
At3g29250.1 68416.m03670 short-chain dehydrogenase/reductase (SD... 30 2.1
At3g18150.1 68416.m02308 hypothetical protein 29 2.8
At2g47150.1 68415.m05888 short-chain dehydrogenase/reductase (SD... 29 2.8
At3g29260.1 68416.m03672 short-chain dehydrogenase/reductase (SD... 28 6.4
At2g47130.1 68415.m05886 short-chain dehydrogenase/reductase (SD... 28 6.4
At2g48010.1 68415.m06009 serine/threonine protein kinase (RFK3) ... 28 8.5
>At3g06440.1 68416.m00745 galactosyltransferase family protein
contains Pfam profile: PF01762 galactosyltransferase
Length = 619
Score = 57.6 bits (133), Expect = 9e-09
Identities = 29/105 (27%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Frame = +1
Query: 61 AQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVFKSAPQRFRSSKWRVSLEEY 240
A++ + TDDD ++ + LL + + +++ +L+ F S+P R + SKW + EE+
Sbjct: 462 AKYIMKTDDDAFVRIDELLSSLEERPSSA----LLYGLISFDSSPDREQGSKWFIPKEEW 517
Query: 241 PWDKWPPYVTAGAYVVSNKAMKMLYVG--SLFVKHFRFDDIYLGI 369
P D +PP+ Y++S+ K + G + F+ +D+ +GI
Sbjct: 518 PLDSYPPWAHGPGYIISHDIAKFVVKGHRQRDLGLFKLEDVAMGI 562
>At1g26810.1 68414.m03267 galactosyltransferase family protein
contains Pfam profile: PF01762 galactosyltransferase
Length = 643
Score = 56.4 bits (130), Expect = 2e-08
Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Frame = +1
Query: 61 AQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVFKSAPQRFRSSKWRVSLEEY 240
A+ + TDDD ++ V +L +S T + R G+++ S P R SKW +S EE+
Sbjct: 483 AKFIMKTDDDAFVRVDEVLLSLS--MTNNTR-GLIYGLINSDSQPIRNPDSKWYISYEEW 539
Query: 241 PWDKWPPYVTAGAYVVSNKAMKMLYVGSLF----VKHFRFDDIYLGI 369
P +K+PP+ Y+VS + VG LF +K F+ +D+ +GI
Sbjct: 540 PEEKYPPWAHGPGYIVSRDIAES--VGKLFKEGNLKMFKLEDVAMGI 584
>At4g21060.1 68417.m03045 galactosyltransferase family protein
contains Pfam profile: PF01762 galactosyltransferase
Length = 741
Score = 51.2 bits (117), Expect = 8e-07
Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 4/126 (3%)
Frame = +1
Query: 61 AQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVFKSAPQRFRSSKWRVSLEEY 240
A + + DDD +I V+++LK + V S + + P R+ KW V+ EE+
Sbjct: 584 APYIMKCDDDTFIRVESILKQIDGV---SPEKSLYMGNLNLRHRP--LRTGKWTVTWEEW 638
Query: 241 PWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKH----FRFDDIYLGIVAKKMGIVPTHCP 408
P +PPY Y++S+ K Y+ S +H F+ +D+ +G+ ++
Sbjct: 639 PEAVYPPYANGPGYIISSNIAK--YIVSQNSRHKLRLFKMEDVSMGLWVEQFNASMQPVE 696
Query: 409 HFHFYK 426
+ H +K
Sbjct: 697 YSHSWK 702
>At5g62620.1 68418.m07859 galactosyltransferase family protein
contains Pfam profile: PF01762 galactosyltransferase
Length = 681
Score = 48.0 bits (109), Expect = 7e-06
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Frame = +1
Query: 49 HCAEAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVFKSAPQRFRSSKWRVS 228
H A+ + DDD ++ V +L T D L+ G + + R KW V+
Sbjct: 519 HQLAAKFIMKCDDDTFVQVDAVLSEAKKTPT----DRSLYIGNI-NYYHKPLRQGKWSVT 573
Query: 229 LEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKH----FRFDDIYLGI 369
EE+P + +PPY Y++SN + ++ F KH F+ +D+ +G+
Sbjct: 574 YEEWPEEDYPPYANGPGYILSNDISR--FIVKEFEKHKLRMFKMEDVSVGM 622
>At1g27120.1 68414.m03305 galactosyltransferase family protein
contains Pfam profile:PF01762 galactosyltransferase
Length = 673
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Frame = +1
Query: 61 AQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVFKSAPQRFRSSKWRVSLEEY 240
A++ + DDD ++ V +++ V R+ + F P R+ KW V+ EE+
Sbjct: 516 AKYVMKCDDDTFVRVDAVIQEAEKV---KGRESLYIGNINFNHKP--LRTGKWAVTFEEW 570
Query: 241 PWDKWPPYVTAGAYVVSNKAMKMLY--VGSLFVKHFRFDDIYLGIVAKK 381
P + +PPY Y++S K + ++ F+ +D+ +G+ +K
Sbjct: 571 PEEYYPPYANGPGYILSYDVAKFIVDDFEQKRLRLFKMEDVSMGMWVEK 619
>At1g74800.1 68414.m08666 galactosyltransferase family protein
contains Pfam profile: PF01762 galactosyltransferase
Length = 672
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/107 (23%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Frame = +1
Query: 61 AQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVFKSAPQRFRSSKWRVSLEEY 240
A++ + DDD ++ + + +++V E + + P R KW V+ EE+
Sbjct: 514 AKYIMKCDDDTFVKLGAV---INEVKKVPEGRSLYIGNMNYYHKP--LRGGKWAVTYEEW 568
Query: 241 PWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKH----FRFDDIYLGI 369
P + +PPY YV+S+ + ++ F +H F+ +D+ +G+
Sbjct: 569 PEEDYPPYANGPGYVLSSDIAR--FIVDKFERHKLRLFKMEDVSVGM 613
>At5g24910.1 68418.m02949 cytochrome P450 family protein similar to
Cytochrome P450 72A1 (SP:Q05047) [Catharanthus roseus];
similar to fatty acid omega-hydroxylase cytochrome P450
4A11 - Homo sapiens, PIR:I53015; supported by cDNA:
gi_16604323_gb_AY058060.1_
Length = 532
Score = 35.1 bits (77), Expect = 0.056
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 406 PHFHFYKKPYERE-VYSDVIASHGYSNHDELIRVWNEQNAL*LRTKLSY-ESRVYSLAAR 579
P+ ++K Y R YS + H Y NH EL++ N+ N L L K+SY R+ S+ R
Sbjct: 92 PYLDHWRKQYGRVYTYSTGVKQHLYMNHPELVKELNQANTLNL-GKVSYVTKRLKSILGR 150
>At3g29250.1 68416.m03670 short-chain dehydrogenase/reductase (SDR)
family protein similar to
3-beta-hydroxysteroiddehydrogenase GI:15983819 from
[Digitalis lanata]; contains Pfam profile: PF00106 short
chain dehydrogenase
Length = 379
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 46 QHCAEAQHYLFTDDDMYISVQNLL 117
+H AEA +L +DD +YIS QNL+
Sbjct: 343 RHIAEAALFLASDDSVYISGQNLV 366
>At3g18150.1 68416.m02308 hypothetical protein
Length = 272
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 781 RIKVIKINNMFWVQPMAAAQRRVPRTHNIYIINSHDSC 668
R++ ++IN WV + A Q P TH + + NS C
Sbjct: 32 RLRTLEINCNIWVPELTAMQIVAPHTHCLRLRNSKLPC 69
>At2g47150.1 68415.m05888 short-chain dehydrogenase/reductase (SDR)
family protein similar to stem secoisolariciresinol
dehydrogenase GI:13752458 from [Forsythia x intermedia]
Length = 200
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 46 QHCAEAQHYLFTDDDMYISVQNL 114
+H AEA +L +DD +YIS QNL
Sbjct: 166 RHVAEAALFLASDDSVYISGQNL 188
>At3g29260.1 68416.m03672 short-chain dehydrogenase/reductase (SDR)
family protein similar to
3-beta-hydroxysteroiddehydrogenase GI:15983819 from
[Digitalis lanata]
Length = 259
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 46 QHCAEAQHYLFTDDDMYISVQNL 114
+H A+A +L +DD +YIS QNL
Sbjct: 223 RHVADAALFLASDDSVYISGQNL 245
>At2g47130.1 68415.m05886 short-chain dehydrogenase/reductase (SDR)
family protein similar to
3-beta-hydroxysteroiddehydrogenase GI:15983819 from
[Digitalis lanata]
Length = 257
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 46 QHCAEAQHYLFTDDDMYISVQNL 114
+H AEA +L +DD Y+S QNL
Sbjct: 223 RHVAEAALFLASDDSAYVSGQNL 245
>At2g48010.1 68415.m06009 serine/threonine protein kinase (RFK3)
identical to receptor-like serine/threonine kinase
[Arabidopsis thaliana] gi|2465927|gb|AAC50045
Length = 617
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 505 WNEQNAL*LRTKLSYESRV-YSLAARTTKRCDTSLET 612
W Q + + T+ +ES + S A T RC+TSLE+
Sbjct: 104 WISQGCMDITTRSQFESLIPNSSLATTAMRCNTSLES 140
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,554,046
Number of Sequences: 28952
Number of extensions: 301631
Number of successful extensions: 946
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1853336000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -