Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30926
         (690 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   1.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.1  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   7.2  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 15/53 (28%), Positives = 29/53 (54%)
 Frame = +1

Query: 502 KPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSK 660
           KP ++ V + E++  K + K  +       K +K+K +T +EE  + KP W++
Sbjct: 244 KPKIEDVGEDEDEDTKKEDKKKK-------KTIKEK-YTEDEELNKTKPIWTR 288



 Score = 23.0 bits (47), Expect = 2.4
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = +1

Query: 499 VKPTLKKVSKYENKFAKLQ-KKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGD 675
           +K  +KK S++     KL  +K  E    +     +KKE   E++DK+K      G+  D
Sbjct: 196 IKEIVKKHSQFIGYPIKLVVEKEREKELSDDEAEEEKKEEEGEDKDKDKPKIEDVGEDED 255

Query: 676 QKVKE 690
           +  K+
Sbjct: 256 EDTKK 260


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 376 DYHERIARLEDEKFDLEYIVKR 441
           DYH    R     F +EY+V R
Sbjct: 835 DYHGAWERQTGHNFTMEYLVSR 856


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 649 DWSKGKPGDQKVKE 690
           DW KG+  D+++KE
Sbjct: 233 DWYKGRLTDEQLKE 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.315    0.132    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,150
Number of Sequences: 336
Number of extensions: 2060
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)