Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30925
         (803 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             34   0.002
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    28   0.088
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               26   0.36 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              25   1.1  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    24   1.9  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       23   3.3  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   5.8  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   5.8  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   5.8  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    22   7.7  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 33.9 bits (74), Expect = 0.002
 Identities = 28/118 (23%), Positives = 42/118 (35%)
 Frame = +2

Query: 416  LKALPKDYYQQTYKALPSDYYQPQASEQQASVVAPPNSQPREGKAYQSQGSYVPNQGSYN 595
            L A+P D        L  D+   +  +QQ     P   Q ++ +    Q S  P Q    
Sbjct: 1476 LYAVPTDKKSACDSKLIVDHSSQKTQQQQ-----PQQQQQQQQQQQPQQQSQQPQQQQPQ 1530

Query: 596  QGQGDYGQNLGSYGPNQGSYGQNDGSYNQNQGSYQPGQGFTGKPLNEKYEEPEPTGPP 769
              Q    Q        Q  YG   G   Q Q  Y  G   +G+  N + ++ + +G P
Sbjct: 1531 PQQQQQQQQQQQPQQQQKEYGAVSGLVVQLQRGYNSGNNRSGEQANSQQQQQQQSGEP 1588



 Score = 31.1 bits (67), Expect = 0.013
 Identities = 22/86 (25%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
 Frame = +2

Query: 479  QPQASEQQASVVAPP--NSQPREGKAYQSQGSYVPNQGSYNQGQGDYGQNLGSYGPNQGS 652
            QPQ  +QQ     P   + QP++ +    Q      Q    Q Q +YG   G     Q  
Sbjct: 1504 QPQQQQQQQQQQQPQQQSQQPQQQQPQPQQQQQQQQQQQPQQQQKEYGAVSGLVVQLQRG 1563

Query: 653  YGQNDGSYNQNQGSYQPGQGFTGKPL 730
            Y   +    +   S Q  Q  +G+P+
Sbjct: 1564 YNSGNNRSGEQANSQQQQQQQSGEPV 1589


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 28.3 bits (60), Expect = 0.088
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +2

Query: 599 GQGDYGQNLGSYGPNQGSYGQNDGSYNQNQGSYQPGQG 712
           GQG  G N+  YG  +G  G    S +Q QG   PG G
Sbjct: 886 GQGVQGMNV-PYGMQRGQSGGQTWSNSQVQGVAVPGSG 922


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 26.2 bits (55), Expect = 0.36
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +2

Query: 530 QPREGKAYQSQGSYVPNQGSYNQGQGDYGQNLGSYGPNQG 649
           +P +G   Q QG   P +    +G+G     +G+YGP +G
Sbjct: 172 EPGKGLGKQLQGISTPVEAHLRKGRG----AIGAYGPEKG 207


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
 Frame = +2

Query: 551  YQSQGSYVPNQGSYNQGQGDYGQNLGSYGPNQGSYGQNDGSYNQN---QGSYQP 703
            Y    +  P +  Y    G YG     YG ++GS G+      +N    GS +P
Sbjct: 1807 YDDPANCAPEEDQYGSQYGQYGAPYDHYG-SRGSVGRRSVGSARNIPVSGSPEP 1859


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = +2

Query: 443  QQTYKALPSDYYQPQASEQQASVVAPPNSQPREGKAY 553
            +  Y ++ SDY   + +  +     PP   P  G+AY
Sbjct: 1332 EHIYSSIDSDYSTLERTAWRQQQPPPPPPPPSSGQAY 1368


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
 Frame = +2

Query: 578 NQGSYNQGQGDYGQNLGSYGPNQGSYGQNDGSYNQNQGSYQPGQGFTGK---PLNEKYEE 748
           ++  +++G   YG+  G    N  +   + G  N N G+    + F  +     N+K  +
Sbjct: 16  DESYFDEGGRSYGKGRGFIIQNNNNDDWSVGKKNSNSGTINESE-FNDENYWQCNDKKTD 74

Query: 749 PEPTGPPRG 775
            E TG  +G
Sbjct: 75  IEETGRGKG 83



 Score = 22.6 bits (46), Expect = 4.4
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +2

Query: 566 SYVPNQG-SYNQGQGDYGQNLGSYGPNQGSYGQNDGSYNQNQ 688
           SY    G SY +G+G   QN  +   + G    N G+ N+++
Sbjct: 18  SYFDEGGRSYGKGRGFIIQNNNNDDWSVGKKNSNSGTINESE 59


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -2

Query: 76  VLSILDFLSVLPVVSKSGACF 14
           V +ILD  S   VVSKSG  F
Sbjct: 298 VQNILDTQSSAKVVSKSGVLF 318


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -2

Query: 76  VLSILDFLSVLPVVSKSGACF 14
           V +ILD  S   VVSKSG  F
Sbjct: 298 VQNILDTQSSAKVVSKSGVLF 318


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -2

Query: 76  VLSILDFLSVLPVVSKSGACF 14
           V +ILD  S   VVSKSG  F
Sbjct: 298 VQNILDTQSSAKVVSKSGVLF 318


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 146 IRRHMHLDRLVRGIG 102
           + RH H+ RLV  IG
Sbjct: 107 VERHKHIVRLVTAIG 121


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,868
Number of Sequences: 438
Number of extensions: 4790
Number of successful extensions: 24
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25489170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)