Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30919
(304 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0132 + 25893241-25893435,25894266-25894487,25894567-258948... 38 0.002
01_06_0646 - 30832201-30832838,30833643-30833838,30833975-308341... 38 0.002
06_01_0371 - 2678332-2678541,2678650-2678804,2678895-2678940,267... 38 0.002
01_01_0646 + 4904790-4904996,4905437-4905483,4905623-4905662,490... 36 0.005
05_02_0027 + 5731546-5731820,5731917-5733039,5733124-5733354 35 0.011
06_01_0915 - 7054701-7055809,7056062-7056359 29 0.70
09_04_0118 - 14816587-14816754,14816866-14816994,14817744-148178... 28 1.2
12_01_1117 - 11922304-11922423,11922673-11922801,11923070-119231... 27 3.7
06_01_0388 - 2773559-2773621,2774141-2774250,2774360-2774423,277... 27 3.7
01_05_0272 + 20280557-20281220,20281799-20281938,20282035-202821... 27 3.7
10_07_0140 - 13334039-13334206,13334297-13334425,13334512-133345... 26 4.9
08_02_0799 - 21317728-21317895,21318018-21318146,21318396-213184... 26 4.9
06_01_0378 - 2717010-2717565,2718165-2718229,2718365-2719117 26 4.9
01_06_0684 + 31196825-31197252,31199189-31199291,31199402-311995... 26 4.9
01_01_0957 + 7516314-7517489 26 4.9
07_03_0243 + 15702967-15703008,15703144-15703197 26 6.5
05_01_0189 + 1361743-1361934,1362454-1362623,1362966-1363500,136... 26 6.5
04_04_1576 - 34551095-34552645 26 6.5
01_06_1204 + 35402747-35404705 26 6.5
10_08_0020 - 14196770-14197174,14198856-14198933 25 8.6
05_01_0429 + 3399266-3399708,3401320-3401382,3403919-3404345,340... 25 8.6
03_06_0765 + 36104604-36105689 25 8.6
>05_06_0132 + 25893241-25893435,25894266-25894487,25894567-25894863,
25894944-25895111,25895201-25895368,25895456-25895536,
25895704-25895770,25895874-25895971,25896587-25896659,
25896753-25896823,25896919-25896968,25897698-25897810,
25898182-25898300,25898629-25898721,25899025-25899051,
25899422-25899823,25900467-25900513,25900612-25900651,
25900733-25900795,25900881-25901018,25901873-25902031,
25902111-25902164,25902324-25902392,25902514-25902643,
25902909-25902949,25903133-25903178,25903200-25903357,
25903560-25903605,25903702-25903853,25904022-25904243
Length = 1202
Score = 37.9 bits (84), Expect = 0.002
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +2
Query: 44 SVSSIIHKGGTIIGSARCMEFIKKERRFKAAYNLMSRGITNLAVIGGDGSLTGA-NLFRQ 220
SV I +GGT++G++R KK N+ RGI + +IGGDG+ GA +F++
Sbjct: 862 SVDDIHKRGGTVLGTSRGGHDTKK-----IVDNIQDRGINQVYIIGGDGTQKGAYEIFKE 916
>01_06_0646 -
30832201-30832838,30833643-30833838,30833975-30834126,
30834258-30834303,30834992-30835216,30835374-30835414,
30835705-30835834,30835951-30836019,30836254-30836307,
30836389-30836547,30836854-30836991,30837079-30837141,
30837225-30837264,30837369-30837415,30838062-30838373
Length = 769
Score = 37.9 bits (84), Expect = 0.002
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +2
Query: 44 SVSSIIHKGGTIIGSARCMEFIKKERRFKAAYNLMSRGITNLAVIGGDGSLTGA 205
SV+ I +GGT++G++R KK N+ RGI + +IGGDG+ GA
Sbjct: 218 SVNDIHKRGGTVLGTSRGGHDTKK-----IVDNIQDRGINQVYIIGGDGTQKGA 266
>06_01_0371 -
2678332-2678541,2678650-2678804,2678895-2678940,
2679203-2679424,2679546-2679586,2680104-2680233,
2680316-2680384,2680612-2680665,2680801-2680959,
2681455-2681541,2681628-2681690,2681801-2681840,
2681939-2681985,2682471-2682773
Length = 541
Score = 37.5 bits (83), Expect = 0.002
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +2
Query: 44 SVSSIIHKGGTIIGSARCMEFIKKERRFKAAYNLMSRGITNLAVIGGDGSLTGANLFRQE 223
SV+ I +GGT++G++R K ++ RGI + VIGGDG+ GA + +E
Sbjct: 198 SVNDIHKRGGTVLGTSR-----GGHDTMKIVDSIQDRGINQVYVIGGDGTQRGAGVIFEE 252
>01_01_0646 +
4904790-4904996,4905437-4905483,4905623-4905662,
4905770-4905970,4906260-4906472,4906561-4906629,
4906711-4906840,4906934-4906974,4907063-4907287,
4907575-4907745,4908713-4908778
Length = 469
Score = 36.3 bits (80), Expect = 0.005
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = +2
Query: 44 SVSSIIHKGGTIIGSARCMEFIKKERRFKAAYNLMSRGITNLAVIGGDGSLTGANLFRQE 223
SV+ I +GGT++G++R K ++ RGI + +IGGDG+ GA++ +E
Sbjct: 183 SVNDIHKRGGTVLGTSR-----GGHDTGKIVDSIKDRGINQVYIIGGDGTQKGASVIYEE 237
>05_02_0027 + 5731546-5731820,5731917-5733039,5733124-5733354
Length = 542
Score = 35.1 bits (77), Expect = 0.011
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +2
Query: 44 SVSSIIHKGGTIIGSARCMEFIKKERRFKAAYNLMSRGITNLAVIGGDGSLTGANLFRQE 223
SV+ I +GGT++G++R + K ++ RGI + +IGGDG+ GA E
Sbjct: 190 SVNGIHKRGGTVLGTSR-----GGQDTGKIVDSIQDRGINQVYIIGGDGTQKGAATIHAE 244
>06_01_0915 - 7054701-7055809,7056062-7056359
Length = 468
Score = 29.1 bits (62), Expect = 0.70
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +2
Query: 17 ITLKEANWSSVSSIIHKGGTIIGSARCMEFIKKERRFKAAY 139
+ L +W + I H G ++G C EF E F A +
Sbjct: 271 VVLSIGHWFLIPGIYHDAGEVVGCHDCAEFNHTETPFFAVF 311
>09_04_0118 -
14816587-14816754,14816866-14816994,14817744-14817824,
14817943-14818047,14818137-14818253,14818335-14818475,
14818965-14819039,14819135-14819236,14819318-14819413,
14819838-14819935,14820056-14820141,14820158-14820231,
14820648-14820758,14821054-14821152,14821941-14822008,
14822855-14822885,14823041-14823148
Length = 562
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 140 NLMSRGITNLAVIGGDGSLTGANLFRQE 223
++ +R I L VIGG+GS GAN +E
Sbjct: 289 SIQARRIDMLFVIGGNGSHAGANAIHEE 316
>12_01_1117 -
11922304-11922423,11922673-11922801,11923070-11923155,
11923724-11923863,11923888-11924119,11924297-11924733,
11925240-11925559
Length = 487
Score = 26.6 bits (56), Expect = 3.7
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 110 KKERRFKA---AYNLMSRGITNLAVIG-GDGSLTGANLFRQEWSNLLDELLENNKI 265
++ RR +A YNL+ RG+ L ++G + L GA + ++ +D + +NKI
Sbjct: 244 EQSRRLQAEAEVYNLVMRGVRGLPLVGIVEFILHGAQAYFRDRYKKIDPSMVDNKI 299
>06_01_0388 -
2773559-2773621,2774141-2774250,2774360-2774423,
2775102-2775282,2775355-2775455,2777340-2777426,
2778028-2778140,2778430-2778679
Length = 322
Score = 26.6 bits (56), Expect = 3.7
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1
Query: 169 CGYWW*WFADW 201
CG+WW W ADW
Sbjct: 44 CGWWWVW-ADW 53
>01_05_0272 +
20280557-20281220,20281799-20281938,20282035-20282124,
20282249-20282354,20282544-20282695,20282776-20282873,
20282948-20283086,20283223-20283321,20283411-20283575
Length = 550
Score = 26.6 bits (56), Expect = 3.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 155 GITNLAVIGGDGSLTGANLFRQEWSNLLD 241
G+ + AV GD A+LFR W ++LD
Sbjct: 164 GVLSYAVQDGDTLGNIASLFRSSWKDILD 192
>10_07_0140 -
13334039-13334206,13334297-13334425,13334512-13334592,
13334805-13334909,13334991-13335107,13335237-13335377,
13335540-13335614,13335897-13335992,13336141-13336252,
13336334-13336407,13336753-13336834,13336917-13337209
Length = 490
Score = 26.2 bits (55), Expect = 4.9
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 149 SRGITNLAVIGGDGSLTGANLFRQE 223
+R + L V+GG+G+ GANL +E
Sbjct: 220 ARRLDMLFVLGGNGTHAGANLIHEE 244
>08_02_0799 -
21317728-21317895,21318018-21318146,21318396-21318457,
21318519-21318534,21318590-21318694,21318993-21319133,
21319338-21319412,21319510-21319611,21319697-21319792,
21320340-21320451,21320642-21320715,21321016-21321097,
21321201-21321508
Length = 489
Score = 26.2 bits (55), Expect = 4.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 140 NLMSRGITNLAVIGGDGSLTGANLFRQE 223
++ +R I L V+GG+G+ GAN +E
Sbjct: 256 SIQARRIDMLFVLGGNGTHAGANAIHEE 283
>06_01_0378 - 2717010-2717565,2718165-2718229,2718365-2719117
Length = 457
Score = 26.2 bits (55), Expect = 4.9
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 185 DGSLTGANLFRQEWSNLLDELLENNKITKDQREKYK 292
DG A LF Q+W++ + +++ I K +YK
Sbjct: 240 DGKDWNARLFSQDWNHAIHNGFKDSSIPKQCLHRYK 275
>01_06_0684 +
31196825-31197252,31199189-31199291,31199402-31199512,
31199614-31199697,31199915-31199986,31200073-31200129,
31200427-31200546,31201301-31201324,31201953-31202063,
31202165-31202202,31202287-31202443,31202700-31202801,
31202878-31202934,31203113-31203259,31203429-31203499,
31203582-31203669,31203810-31203866,31203996-31204193
Length = 674
Score = 26.2 bits (55), Expect = 4.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 71 GTIIGSARCMEFIKKERRFKAAYNLMSRGITNLAV 175
G+ IGSA +EF+ + R FK + + G T +V
Sbjct: 547 GSDIGSAGGLEFLHRYRDFKRSLQMAQEGRTGESV 581
>01_01_0957 + 7516314-7517489
Length = 391
Score = 26.2 bits (55), Expect = 4.9
Identities = 15/57 (26%), Positives = 22/57 (38%)
Frame = -2
Query: 216 RNKLAPVSEPSPPITARFVIPRLIKLYAALKRRSFLMNSMHLADXXXXXXXXXIELT 46
+ K P P PP T V+P +K A +++ S A+ ELT
Sbjct: 119 KKKKQPAPPPQPPTTTTTVLPEPVKAIEAAAKKAAAAPSARGANEEVDRRPPPPELT 175
>07_03_0243 + 15702967-15703008,15703144-15703197
Length = 31
Score = 25.8 bits (54), Expect = 6.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 128 KAAYNLMSRGITNLAVIGGDGSLTG 202
K ++ RGI + VIGGDG+ G
Sbjct: 2 KIVDSIQDRGINQVYVIGGDGTQKG 26
>05_01_0189 +
1361743-1361934,1362454-1362623,1362966-1363500,
1365170-1365199
Length = 308
Score = 25.8 bits (54), Expect = 6.5
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 128 KAAYNLMSRGITNLAVIGGDGSLTGANLFRQEWSNL 235
KAA + +R +N AV+GGDG G R W +L
Sbjct: 81 KAAAVVPARQASNGAVLGGDGG--GLPQIRASWPDL 114
>04_04_1576 - 34551095-34552645
Length = 516
Score = 25.8 bits (54), Expect = 6.5
Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Frame = -2
Query: 156 PRL-IKLYAALKRRSFLMNSMHL 91
PRL + L+AAL +R FL+ S H+
Sbjct: 53 PRLAVSLHAALLKRGFLLASSHI 75
>01_06_1204 + 35402747-35404705
Length = 652
Score = 25.8 bits (54), Expect = 6.5
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 38 WSSVSSIIHKGGTIIGSARCMEFIKKERRF 127
W+ V S++ GG IGS ++K R F
Sbjct: 547 WAKVMSVLQTGGPGIGSLPAKALLQKLRMF 576
>10_08_0020 - 14196770-14197174,14198856-14198933
Length = 160
Score = 25.4 bits (53), Expect = 8.6
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 142 LNEPRYNESCGYWW 183
LN+PR N S GY W
Sbjct: 39 LNQPRPNRSAGYTW 52
>05_01_0429 +
3399266-3399708,3401320-3401382,3403919-3404345,
3404863-3405141
Length = 403
Score = 25.4 bits (53), Expect = 8.6
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 222 SCRNKLAPVSEPSPPITARF-VIPRLIKLYAALKRRSF 112
+CR +L+ + SPP+ AR +P I + + RSF
Sbjct: 329 ACRPRLSTIYFASPPLHARISALPETITASSPRRYRSF 366
>03_06_0765 + 36104604-36105689
Length = 361
Score = 25.4 bits (53), Expect = 8.6
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 234 RLDHSCRNKLAPV-SEPSPPITARFVIPRLIKLYAA 130
R D++C APV + P PP+ +P + Y A
Sbjct: 304 RPDYACTRVYAPVTTTPPPPLYRSTTMPEFLSHYRA 339
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,510,682
Number of Sequences: 37544
Number of extensions: 126008
Number of successful extensions: 371
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 371
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 351703996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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