Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30916
         (714 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    31   0.027
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    25   2.4  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              25   3.1  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   4.1  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 31.5 bits (68), Expect = 0.027
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = -3

Query: 589 QGPRQHVVGERRISPRARPQAGE*RHQQHPGGHQDLREQLQR 464
           Q  +Q   GER + P+ R Q  + +HQQ     Q  R+Q QR
Sbjct: 286 QQQQQQQQGERYVPPQLRQQRQQQQHQQQQQQQQQQRQQQQR 327



 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -3

Query: 415 QGPARPRRQGLDPQEDDGQARRPRRVHLRQETP 317
           Q P + R Q   PQ+   Q R+P +  L + +P
Sbjct: 471 QRPQQQRPQQQRPQQQRSQQRKPAKPELIEVSP 503


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 15/55 (27%), Positives = 26/55 (47%)
 Frame = -1

Query: 576 NTSWESGASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYK 412
           NT     ASA   A++  + V    +E      S  ND+++ D++SG   + + K
Sbjct: 828 NTITYGTASAPFLAIRTLNQVLEDNKEKYPLAASRINDFYVDDFISGADSENEAK 882


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
 Frame = -3

Query: 589 QGPRQHVVGERRISPRARPQAGE*RHQQHPGGHQDLREQLQRLPPGRLLVRGIPRRTVQG 410
           Q  +QH   E++   R + Q  +  HQ+     Q  R+Q Q+     L    + RR    
Sbjct: 264 QQQQQHQQREQQQQQRVQQQNQQ--HQRQQQQQQQQRQQQQQQEQQELWTTVVRRRQNTQ 321

Query: 409 PARPRRQGLDPQEDDGQARRPR-RVHLRQE 323
             +   Q    Q+  G+ + P+ R  L+Q+
Sbjct: 322 QQQQSNQPQQQQQQTGRYQPPQMRQQLQQQ 351


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +2

Query: 467 LKLLSQVLMTSRMLLVTSLSSL 532
           LKLL+ V MTS+M+L+T L  L
Sbjct: 897 LKLLA-VCMTSQMMLITQLMPL 917


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,500
Number of Sequences: 2352
Number of extensions: 13565
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)